RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 NCKAP5LQ9HCH0 1330 aa19.56■□□□□ 0.72
CDK4-214ENST00000552862 CLTCQ00610 1675 aaKnown RBP19.56■□□□□ 0.72
CDK4-214ENST00000552862 ARHGEF5Q12774 1597 aa19.55■□□□□ 0.72
CDK4-214ENST00000552862 CAMSAP2Q08AD1 1489 aa19.54■□□□□ 0.72
CDK4-214ENST00000552862 CEP170BQ9Y4F5 1589 aaPredicted RBP19.54■□□□□ 0.72
CDK4-214ENST00000552862 LRRC9Q6ZRR7 1453 aa19.54■□□□□ 0.72
CDK4-214ENST00000552862 MYOM3Q5VTT5 1437 aa19.53■□□□□ 0.72
CDK4-214ENST00000552862 KDM5DQ9BY66 1539 aa19.53■□□□□ 0.72
CDK4-214ENST00000552862 TOM1O60784 492 aa19.53■□□□□ 0.72
CDK4-214ENST00000552862 PZPP20742 1482 aa19.53■□□□□ 0.72
CDK4-214ENST00000552862 TCOF1Q13428 1488 aaKnown RBP19.53■□□□□ 0.72
CDK4-214ENST00000552862 NLRP1Q9C000 1473 aa19.53■□□□□ 0.72
CDK4-214ENST00000552862 UBAP1LF5GYI3 381 aa19.52■□□□□ 0.72
CDK4-214ENST00000552862 ZNF142P52746 1687 aaPredicted RBP19.51■□□□□ 0.71
CDK4-214ENST00000552862 LTBP4Q8N2S1 1624 aa19.5■□□□□ 0.71
CDK4-214ENST00000552862 DISP3Q9P2K9 1392 aa19.49■□□□□ 0.71
CDK4-214ENST00000552862 MYO3AQ8NEV4 1616 aa19.48■□□□□ 0.71
CDK4-214ENST00000552862 ZNF335Q9H4Z2 1342 aaPredicted RBP19.46■□□□□ 0.71
CDK4-214ENST00000552862 KANK1Q14678 1352 aa19.45■□□□□ 0.7
CDK4-214ENST00000552862 FBXO31Q5XUX0 539 aaPredicted RBP19.45■□□□□ 0.7
CDK4-214ENST00000552862 CPS1P31327 1500 aa19.45■□□□□ 0.7
CDK4-214ENST00000552862 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
CDK4-214ENST00000552862 MAST1Q9Y2H9 1570 aa19.43■□□□□ 0.7
CDK4-214ENST00000552862 EID1Q9Y6B2 187 aa19.42■□□□□ 0.7
CDK4-214ENST00000552862 DNMT1P26358 1616 aaKnown RBP19.42■□□□□ 0.7
CDK4-214ENST00000552862 DUOX2Q9NRD8 1548 aa19.41■□□□□ 0.7
CDK4-214ENST00000552862 UGGT1Q9NYU2 1555 aa19.4■□□□□ 0.7
CDK4-214ENST00000552862 EIF2AK4Q9P2K8 1649 aaKnown RBP19.4■□□□□ 0.7
CDK4-214ENST00000552862 ZC3H13Q5T200 1668 aaKnown RBP19.39■□□□□ 0.69
CDK4-214ENST00000552862 HDGFP51858 240 aaKnown RBP19.38■□□□□ 0.69
CDK4-214ENST00000552862 KANK4Q5T7N3 995 aaPredicted RBP19.38■□□□□ 0.69
CDK4-214ENST00000552862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.38■□□□□ 0.698e-9■■■■□ 22.9
CDK4-214ENST00000552862 STAG3Q9UJ98 1225 aa19.38■□□□□ 0.69
CDK4-214ENST00000552862 MED14O60244 1454 aa19.37■□□□□ 0.69
CDK4-214ENST00000552862 SHANK2Q9UPX8 1470 aa19.37■□□□□ 0.69
CDK4-214ENST00000552862 SOCS7O14512 581 aa19.37■□□□□ 0.69
CDK4-214ENST00000552862 ERBINQ96RT1 1412 aa19.36■□□□□ 0.69
CDK4-214ENST00000552862 ANKRD30AQ9BXX3 1397 aa19.36■□□□□ 0.69
CDK4-214ENST00000552862 NPHP4O75161 1426 aaPredicted RBP19.35■□□□□ 0.69
CDK4-214ENST00000552862 ARHGAP31Q2M1Z3 1444 aa19.35■□□□□ 0.69
CDK4-214ENST00000552862 KIF15Q9NS87 1388 aa19.34■□□□□ 0.69
CDK4-214ENST00000552862 RNF17Q9BXT8 1623 aaKnown RBP19.34■□□□□ 0.69
CDK4-214ENST00000552862 DEPDC5O75140 1603 aa19.33■□□□□ 0.69
CDK4-214ENST00000552862 SCAF1Q9H7N4 1312 aaKnown RBP19.33■□□□□ 0.69
CDK4-214ENST00000552862 RRP7BPQ9NSQ0 103 aa19.33■□□□□ 0.68
CDK4-214ENST00000552862 ABCC3O15438 1527 aa19.31■□□□□ 0.68
CDK4-214ENST00000552862 TXNDC2Q86VQ3 553 aa19.31■□□□□ 0.68
CDK4-214ENST00000552862 SLC52A1Q9NWF4 448 aa19.31■□□□□ 0.68
CDK4-214ENST00000552862 SPATA31D1Q6ZQQ2 1576 aa19.31■□□□□ 0.68
CDK4-214ENST00000552862 POLR1AO95602 1720 aaPredicted RBP19.29■□□□□ 0.68
CDK4-214ENST00000552862 ERVK-7P63135 1459 aa19.28■□□□□ 0.68
CDK4-214ENST00000552862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.28■□□□□ 0.68
CDK4-214ENST00000552862 PIP4K2BP78356 416 aa19.27■□□□□ 0.68
CDK4-214ENST00000552862 ABCC5O15440 1437 aa19.26■□□□□ 0.67
CDK4-214ENST00000552862 DAPK1P53355 1430 aa19.25■□□□□ 0.67
CDK4-214ENST00000552862 FGD6Q6ZV73 1430 aa19.25■□□□□ 0.67
CDK4-214ENST00000552862 SCAF11Q99590 1463 aaKnown RBP19.23■□□□□ 0.67
CDK4-214ENST00000552862 PTPN23Q9H3S7 1636 aa19.22■□□□□ 0.67
CDK4-214ENST00000552862 NEURL4Q96JN8 1562 aa19.21■□□□□ 0.67
CDK4-214ENST00000552862 PRDM15P57071 1507 aaPredicted RBP19.2■□□□□ 0.66
CDK4-214ENST00000552862 HSPA1LP34931 641 aa19.2■□□□□ 0.66
CDK4-214ENST00000552862 IQGAP1P46940 1657 aa19.2■□□□□ 0.66
CDK4-214ENST00000552862 FAM50AQ14320 339 aaKnown RBP19.19■□□□□ 0.66
CDK4-214ENST00000552862 CHIC2Q9UKJ5 165 aa19.19■□□□□ 0.66
CDK4-214ENST00000552862 SLIT1O75093 1534 aa19.19■□□□□ 0.66
CDK4-214ENST00000552862 TMEM2Q9UHN6 1383 aa19.19■□□□□ 0.66
CDK4-214ENST00000552862 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
CDK4-214ENST00000552862 LMTK2Q8IWU2 1503 aa19.17■□□□□ 0.66
CDK4-214ENST00000552862 ILDR2Q71H61 639 aa19.17■□□□□ 0.66
CDK4-214ENST00000552862 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.17■□□□□ 0.66
CDK4-214ENST00000552862 RPRD2Q5VT52 1461 aaKnown RBP19.16■□□□□ 0.66
CDK4-214ENST00000552862 ARHGAP23Q9P227 1491 aa19.16■□□□□ 0.66
CDK4-214ENST00000552862 VWDEQ8N2E2 1590 aa19.16■□□□□ 0.66
CDK4-214ENST00000552862 IDI1Q13907 227 aa19.16■□□□□ 0.66
CDK4-214ENST00000552862 BCANQ96GW7 911 aa19.16■□□□□ 0.66
CDK4-214ENST00000552862 KCNA6P17658 529 aa19.15■□□□□ 0.66
CDK4-214ENST00000552862 LTKP29376 864 aa19.15■□□□□ 0.66
CDK4-214ENST00000552862 KDM5AP29375 1690 aaKnown RBP19.14■□□□□ 0.66
CDK4-214ENST00000552862 SYNMO15061 1565 aa19.14■□□□□ 0.65
CDK4-214ENST00000552862 ANKRD50Q9ULJ7 1429 aa19.13■□□□□ 0.65
CDK4-214ENST00000552862 MROH1Q8NDA8 1641 aa19.13■□□□□ 0.65
CDK4-214ENST00000552862 LRRC7Q96NW7 1537 aa19.12■□□□□ 0.65
CDK4-214ENST00000552862 ADGRL2O95490 1459 aa19.12■□□□□ 0.65
CDK4-214ENST00000552862 UBR1Q8IWV7 1749 aa19.11■□□□□ 0.65
CDK4-214ENST00000552862 EFCAB6Q5THR3 1501 aa19.11■□□□□ 0.65
CDK4-214ENST00000552862 CROCC2H7BZ55 1655 aa19.11■□□□□ 0.65
CDK4-214ENST00000552862 PPP1R15AO75807 674 aaPredicted RBP19.1■□□□□ 0.65
CDK4-214ENST00000552862 PROSER2Q86WR7 435 aaPredicted RBP19.1■□□□□ 0.65
CDK4-214ENST00000552862 CEP152O94986 1710 aa19.08■□□□□ 0.65
CDK4-214ENST00000552862 NOS1P29475 1434 aa19.08■□□□□ 0.64
CDK4-214ENST00000552862 FAM135BQ49AJ0 1406 aa19.07■□□□□ 0.64
CDK4-214ENST00000552862 ROCK1Q13464 1354 aa19.06■□□□□ 0.64
CDK4-214ENST00000552862 CFAP65Q6ZU64 1925 aaKnown RBP19.06■□□□□ 0.64
CDK4-214ENST00000552862 TBX22Q9Y458 520 aa19.04■□□□□ 0.64
CDK4-214ENST00000552862 NCOA3Q9Y6Q9 1424 aa19.03■□□□□ 0.64
CDK4-214ENST00000552862 MSH6P52701 1360 aa19.03■□□□□ 0.64
CDK4-214ENST00000552862 SLC26A8Q96RN1 970 aa19.01■□□□□ 0.63
CDK4-214ENST00000552862 PIK3C2BO00750 1634 aa19■□□□□ 0.63
CDK4-214ENST00000552862 TMEM94Q12767 1356 aa19■□□□□ 0.63
CDK4-214ENST00000552862 PLEKHG1Q9ULL1 1385 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms