RNA–Protein interactions for RNA: ENST00000552792.5

PFKM-228, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-228ENST00000552792 INO80Q9ULG1 1556 aaPredicted RBP25.56■■□□□ 1.68
PFKM-228ENST00000552792 DEPDC5O75140 1603 aa25.55■■□□□ 1.68
PFKM-228ENST00000552792 ADGBQ8N7X0 1667 aa25.55■■□□□ 1.68
PFKM-228ENST00000552792 THEMISQ8N1K5 641 aaPredicted RBP25.54■■□□□ 1.68
PFKM-228ENST00000552792 STRCP1A6NGW2 1772 aa25.54■■□□□ 1.68
PFKM-228ENST00000552792 MED14O60244 1454 aa25.52■■□□□ 1.68
PFKM-228ENST00000552792 FAM135AQ9P2D6 1515 aa25.52■■□□□ 1.68
PFKM-228ENST00000552792 HNRNPMP52272 730 aaKnown RBP eCLIP25.51■■□□□ 1.67
PFKM-228ENST00000552792 UGGT1Q9NYU2 1555 aa25.49■■□□□ 1.67
PFKM-228ENST00000552792 CCDC18Q5T9S5 1454 aa25.47■■□□□ 1.67
PFKM-228ENST00000552792 ARHGAP35Q9NRY4 1499 aa25.47■■□□□ 1.67
PFKM-228ENST00000552792 FBXO31Q5XUX0 539 aaPredicted RBP25.46■■□□□ 1.67
PFKM-228ENST00000552792 PZPP20742 1482 aa25.45■■□□□ 1.66
PFKM-228ENST00000552792 PLEKHH2Q8IVE3 1493 aa25.44■■□□□ 1.66
PFKM-228ENST00000552792 NLRP1Q9C000 1473 aa25.44■■□□□ 1.66
PFKM-228ENST00000552792 UBTFP17480 764 aaKnown RBP25.43■■□□□ 1.66
PFKM-228ENST00000552792 KDM5DQ9BY66 1539 aa25.4■■□□□ 1.66
PFKM-228ENST00000552792 KIAA1107Q9UPP5 1409 aa25.39■■□□□ 1.66
PFKM-228ENST00000552792 EHMT2Q96KQ7 1210 aa25.39■■□□□ 1.66
PFKM-228ENST00000552792 MIA2Q96PC5 1412 aa25.37■■□□□ 1.65
PFKM-228ENST00000552792 GPATCH8Q9UKJ3 1502 aaKnown RBP25.35■■□□□ 1.65
PFKM-228ENST00000552792 UPF1Q92900 1129 aaKnown RBP eCLIP25.34■■□□□ 1.65
PFKM-228ENST00000552792 CFDP1Q9UEE9 299 aaPredicted RBP25.34■■□□□ 1.65
PFKM-228ENST00000552792 XIRP1Q702N8 1843 aaKnown RBP25.34■■□□□ 1.65
PFKM-228ENST00000552792 FAM135BQ49AJ0 1406 aa25.34■■□□□ 1.65
PFKM-228ENST00000552792 WASHC2CQ9Y4E1 1318 aa25.34■■□□□ 1.65
PFKM-228ENST00000552792 ZC3H13Q5T200 1668 aaKnown RBP25.32■■□□□ 1.64
PFKM-228ENST00000552792 KIF3BO15066 747 aa25.31■■□□□ 1.64
PFKM-228ENST00000552792 ROBO1Q9Y6N7 1651 aa25.3■■□□□ 1.64
PFKM-228ENST00000552792 CASKIN1Q8WXD9 1431 aa25.29■■□□□ 1.64
PFKM-228ENST00000552792 DHX29Q7Z478 1369 aaKnown RBP25.28■■□□□ 1.64
PFKM-228ENST00000552792 CCNB3Q8WWL7 1395 aa25.26■■□□□ 1.63
PFKM-228ENST00000552792 TRIM52Q96A61 297 aa25.25■■□□□ 1.63
PFKM-228ENST00000552792 CHIC1Q5VXU3 224 aa25.23■■□□□ 1.63
PFKM-228ENST00000552792 SCAF11Q99590 1463 aaKnown RBP25.21■■□□□ 1.63
PFKM-228ENST00000552792 RTEL1-TNFRSF6BF6WH68 1400 aa25.21■■□□□ 1.63
PFKM-228ENST00000552792 PHLPP1O60346 1717 aa25.2■■□□□ 1.63
PFKM-228ENST00000552792 LRRC9Q6ZRR7 1453 aa25.19■■□□□ 1.62
PFKM-228ENST00000552792 MEX3CQ5U5Q3 659 aaKnown RBP25.18■■□□□ 1.62
PFKM-228ENST00000552792 JCADQ9P266 1359 aa25.18■■□□□ 1.62
PFKM-228ENST00000552792 ZNF772Q68DY9 489 aaPredicted RBP25.17■■□□□ 1.62
PFKM-228ENST00000552792 UBR1Q8IWV7 1749 aa25.17■■□□□ 1.62
PFKM-228ENST00000552792 FYCO1Q9BQS8 1478 aa25.16■■□□□ 1.62
PFKM-228ENST00000552792 TMEM94Q12767 1356 aa25.14■■□□□ 1.61
PFKM-228ENST00000552792 TXNDC2Q86VQ3 553 aa25.12■■□□□ 1.61
PFKM-228ENST00000552792 CFAP65Q6ZU64 1925 aaKnown RBP25.11■■□□□ 1.61
PFKM-228ENST00000552792 EID1Q9Y6B2 187 aa25.1■■□□□ 1.61
PFKM-228ENST00000552792 ZNF644Q9H582 1327 aaPredicted RBP25.1■■□□□ 1.61
PFKM-228ENST00000552792 MBD5Q9P267 1494 aa25.09■■□□□ 1.61
PFKM-228ENST00000552792 ERVK-7P63135 1459 aa25.09■■□□□ 1.61
PFKM-228ENST00000552792 RXRBP28702 533 aa25.07■■□□□ 1.6
PFKM-228ENST00000552792 SRCAPQ6ZRS2 3230 aa25.07■■□□□ 1.6
PFKM-228ENST00000552792 MTUS2Q5JR59 1369 aa25.05■■□□□ 1.6
PFKM-228ENST00000552792 LTKP29376 864 aa25.05■■□□□ 1.6
PFKM-228ENST00000552792 PROSER2Q86WR7 435 aaPredicted RBP25.05■■□□□ 1.6
PFKM-228ENST00000552792 SLIT1O75093 1534 aa25.05■■□□□ 1.6
PFKM-228ENST00000552792 CCDC141Q6ZP82 1450 aa25.04■■□□□ 1.6
PFKM-228ENST00000552792 ABCC3O15438 1527 aa25.04■■□□□ 1.6
PFKM-228ENST00000552792 MAP3K1Q13233 1512 aa25.04■■□□□ 1.6
PFKM-228ENST00000552792 SPATA31A6Q5VVP1 1343 aa25.04■■□□□ 1.6
PFKM-228ENST00000552792 MSH6P52701 1360 aa25.04■■□□□ 1.6
PFKM-228ENST00000552792 ARHGAP23Q9P227 1491 aa25.03■■□□□ 1.6
PFKM-228ENST00000552792 TIAM1Q13009 1591 aa25.03■■□□□ 1.6
PFKM-228ENST00000552792 LRP6O75581 1613 aa25.02■■□□□ 1.6
PFKM-228ENST00000552792 RBM33Q96EV2 1170 aaKnown RBP25.01■■□□□ 1.59
PFKM-228ENST00000552792 NCOA2Q15596 1464 aa25.01■■□□□ 1.59
PFKM-228ENST00000552792 CDK12Q9NYV4 1490 aaPredicted RBP25■■□□□ 1.59
PFKM-228ENST00000552792 COL16A1Q07092 1604 aaPredicted RBP25■■□□□ 1.59
PFKM-228ENST00000552792 KCNA6P17658 529 aa24.99■■□□□ 1.59
PFKM-228ENST00000552792 SLAIN2Q9P270 581 aa24.98■■□□□ 1.59
PFKM-228ENST00000552792 FOXD1Q16676 465 aa24.97■■□□□ 1.59
PFKM-228ENST00000552792 CEP152O94986 1710 aa24.97■■□□□ 1.59
PFKM-228ENST00000552792 PRDM15P57071 1507 aaPredicted RBP24.96■■□□□ 1.59
PFKM-228ENST00000552792 FGD6Q6ZV73 1430 aa24.96■■□□□ 1.59
PFKM-228ENST00000552792 STAG3Q9UJ98 1225 aa24.95■■□□□ 1.58
PFKM-228ENST00000552792 NKTRP30414 1462 aaKnown RBP24.95■■□□□ 1.58
PFKM-228ENST00000552792 SHPRHQ149N8 1683 aa24.92■■□□□ 1.58
PFKM-228ENST00000552792 RSPH4AQ5TD94 716 aa24.92■■□□□ 1.58
PFKM-228ENST00000552792 CAMSAP2Q08AD1 1489 aa24.89■■□□□ 1.58
PFKM-228ENST00000552792 TSPY4P0CV99 314 aa24.89■■□□□ 1.58
PFKM-228ENST00000552792 TSPY10P0CW01 314 aa24.89■■□□□ 1.58
PFKM-228ENST00000552792 SLC26A8Q96RN1 970 aa24.89■■□□□ 1.58
PFKM-228ENST00000552792 EHBP1L1Q8N3D4 1523 aa24.89■■□□□ 1.57
PFKM-228ENST00000552792 PIK3C2BO00750 1634 aa24.89■■□□□ 1.57
PFKM-228ENST00000552792 EIF2AK4Q9P2K8 1649 aaKnown RBP24.89■■□□□ 1.57
PFKM-228ENST00000552792 TMEM2Q9UHN6 1383 aa24.89■■□□□ 1.57
PFKM-228ENST00000552792 NUTM2BA6NNL0 878 aaPredicted RBP24.88■■□□□ 1.57
PFKM-228ENST00000552792 NUTM2EB1AL46 878 aaPredicted RBP24.88■■□□□ 1.57
PFKM-228ENST00000552792 NUTM2DQ5VT03 806 aaPredicted RBP24.88■■□□□ 1.57
PFKM-228ENST00000552792 NUTM2AQ8IVF1 878 aaPredicted RBP24.88■■□□□ 1.57
PFKM-228ENST00000552792 ZRANB1Q9UGI0 708 aa24.88■■□□□ 1.57
PFKM-228ENST00000552792 NWD1Q149M9 1564 aa24.88■■□□□ 1.57
PFKM-228ENST00000552792 KDM5AP29375 1690 aaKnown RBP24.86■■□□□ 1.57
PFKM-228ENST00000552792 BCANQ96GW7 911 aa24.86■■□□□ 1.57
PFKM-228ENST00000552792 AFF2P51816 1311 aa24.83■■□□□ 1.56
PFKM-228ENST00000552792 EFCAB6Q5THR3 1501 aa24.82■■□□□ 1.56
PFKM-228ENST00000552792 RGS12O14924 1447 aa24.82■■□□□ 1.56
PFKM-228ENST00000552792 ARHGEF5Q12774 1597 aa24.82■■□□□ 1.56
PFKM-228ENST00000552792 C14orf37Q86TY3 774 aa24.81■■□□□ 1.56
PFKM-228ENST00000552792 AHDC1Q5TGY3 1603 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms