RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 A2MP01023 1474 aa15.94■□□□□ 0.14
LINC00661-206ENST00000552608 DIP2CQ9Y2E4 1556 aa15.93■□□□□ 0.14
LINC00661-206ENST00000552608 RAPGEF3O95398 923 aa15.93■□□□□ 0.14
LINC00661-206ENST00000552608 BCORL1Q5H9F3 1711 aa15.93■□□□□ 0.14
LINC00661-206ENST00000552608 FAM135AQ9P2D6 1515 aa15.92■□□□□ 0.14
LINC00661-206ENST00000552608 KANK1Q14678 1352 aa15.91■□□□□ 0.14
LINC00661-206ENST00000552608 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
LINC00661-206ENST00000552608 TIMELESSQ9UNS1 1208 aa15.9■□□□□ 0.14
LINC00661-206ENST00000552608 RNF17Q9BXT8 1623 aaKnown RBP15.9■□□□□ 0.14
LINC00661-206ENST00000552608 PRDM15P57071 1507 aaPredicted RBP15.89■□□□□ 0.13
LINC00661-206ENST00000552608 REREQ9P2R6 1566 aa15.87■□□□□ 0.13
LINC00661-206ENST00000552608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC00661-206ENST00000552608 TET3O43151 1660 aa15.86■□□□□ 0.13
LINC00661-206ENST00000552608 KIF3BO15066 747 aa15.86■□□□□ 0.13
LINC00661-206ENST00000552608 PKD2Q13563 968 aa15.86■□□□□ 0.13
LINC00661-206ENST00000552608 ATP10AO60312 1499 aa15.85■□□□□ 0.13
LINC00661-206ENST00000552608 ARHGEF40Q8TER5 1519 aa15.84■□□□□ 0.13
LINC00661-206ENST00000552608 VWDEQ8N2E2 1590 aa15.84■□□□□ 0.13
LINC00661-206ENST00000552608 NEUROD1Q13562 356 aa15.84■□□□□ 0.13
LINC00661-206ENST00000552608 TONSLQ96HA7 1378 aa15.84■□□□□ 0.13
LINC00661-206ENST00000552608 YEATS2Q9ULM3 1422 aa15.84■□□□□ 0.13
LINC00661-206ENST00000552608 MROH1Q8NDA8 1641 aa15.83■□□□□ 0.13
LINC00661-206ENST00000552608 ZC3H13Q5T200 1668 aaKnown RBP15.83■□□□□ 0.13
LINC00661-206ENST00000552608 SIN3AQ96ST3 1273 aa15.83■□□□□ 0.12
LINC00661-206ENST00000552608 ANKRD30BQ9BXX2 1392 aa15.83■□□□□ 0.12
LINC00661-206ENST00000552608 CEP152O94986 1710 aa15.82■□□□□ 0.12
LINC00661-206ENST00000552608 E9PCH4 1651 aa15.8■□□□□ 0.12
LINC00661-206ENST00000552608 AGLP35573 1532 aa15.8■□□□□ 0.12
LINC00661-206ENST00000552608 LMTK2Q8IWU2 1503 aa15.8■□□□□ 0.12
LINC00661-206ENST00000552608 RPRD2Q5VT52 1461 aaKnown RBP15.8■□□□□ 0.12
LINC00661-206ENST00000552608 COL17A1Q9UMD9 1497 aaPredicted RBP15.8■□□□□ 0.12
LINC00661-206ENST00000552608 FOXD1Q16676 465 aa15.79■□□□□ 0.12
LINC00661-206ENST00000552608 SPHKAPQ2M3C7 1700 aa15.78■□□□□ 0.12
LINC00661-206ENST00000552608 EFCAB6Q5THR3 1501 aa15.77■□□□□ 0.11
LINC00661-206ENST00000552608 GGT6Q6P531 493 aa15.76■□□□□ 0.11
LINC00661-206ENST00000552608 CAMSAP1Q5T5Y3 1602 aa15.76■□□□□ 0.11
LINC00661-206ENST00000552608 CCDC144AA2RUR9 1427 aa15.75■□□□□ 0.11
LINC00661-206ENST00000552608 ABCC3O15438 1527 aa15.73■□□□□ 0.11
LINC00661-206ENST00000552608 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
LINC00661-206ENST00000552608 TRPM2O94759 1503 aa15.73■□□□□ 0.11
LINC00661-206ENST00000552608 WASHC2CQ9Y4E1 1318 aa15.72■□□□□ 0.11
LINC00661-206ENST00000552608 PPP1R15AO75807 674 aaPredicted RBP15.69■□□□□ 0.1
LINC00661-206ENST00000552608 PTPRTO14522 1441 aa15.68■□□□□ 0.1
LINC00661-206ENST00000552608 KIF1BO60333 1816 aa15.68■□□□□ 0.1
LINC00661-206ENST00000552608 SIGLEC1Q9BZZ2 1709 aa15.68■□□□□ 0.1
LINC00661-206ENST00000552608 ARHGAP31Q2M1Z3 1444 aa15.67■□□□□ 0.1
LINC00661-206ENST00000552608 CLTCQ00610 1675 aaKnown RBP15.67■□□□□ 0.1
LINC00661-206ENST00000552608 PLA2R1Q13018 1463 aa15.66■□□□□ 0.1
LINC00661-206ENST00000552608 CLTCL1P53675 1640 aa15.65■□□□□ 0.1
LINC00661-206ENST00000552608 CFAP65Q6ZU64 1925 aaKnown RBP15.65■□□□□ 0.1
LINC00661-206ENST00000552608 L3MBTL2Q969R5 705 aa15.65■□□□□ 0.1
LINC00661-206ENST00000552608 ESF1Q9H501 851 aaKnown RBP15.65■□□□□ 0.1
LINC00661-206ENST00000552608 CNTLNQ9NXG0 1405 aa15.65■□□□□ 0.1
LINC00661-206ENST00000552608 ARID4BQ4LE39 1312 aaPredicted RBP15.65■□□□□ 0.1
LINC00661-206ENST00000552608 NPATQ14207 1427 aa15.64■□□□□ 0.09
LINC00661-206ENST00000552608 NEURL4Q96JN8 1562 aa15.64■□□□□ 0.09
LINC00661-206ENST00000552608 PREX1Q8TCU6 1659 aa15.63■□□□□ 0.09
LINC00661-206ENST00000552608 MROH2AA6NES4 1674 aa15.61■□□□□ 0.09
LINC00661-206ENST00000552608 MLECQ14165 292 aa15.6■□□□□ 0.09
LINC00661-206ENST00000552608 NOS1P29475 1434 aa15.59■□□□□ 0.09
LINC00661-206ENST00000552608 ZNF316A6NFI3 1004 aaPredicted RBP15.58■□□□□ 0.08
LINC00661-206ENST00000552608 PIK3C2BO00750 1634 aa15.57■□□□□ 0.08
LINC00661-206ENST00000552608 FER1L4A9Z1Z3 1794 aa15.57■□□□□ 0.08
LINC00661-206ENST00000552608 STAC3Q96MF2 364 aa15.57■□□□□ 0.08
LINC00661-206ENST00000552608 UHRF1BP1Q6BDS2 1440 aa15.56■□□□□ 0.08
LINC00661-206ENST00000552608 SPATA31E1Q6ZUB1 1445 aa15.56■□□□□ 0.08
LINC00661-206ENST00000552608 SYNMO15061 1565 aa15.56■□□□□ 0.08
LINC00661-206ENST00000552608 DCAF11Q8TEB1 546 aa15.55■□□□□ 0.08
LINC00661-206ENST00000552608 SPATA31D1Q6ZQQ2 1576 aa15.54■□□□□ 0.08
LINC00661-206ENST00000552608 UGGT1Q9NYU2 1555 aa15.54■□□□□ 0.08
LINC00661-206ENST00000552608 ERVK-7P63135 1459 aa15.54■□□□□ 0.08
LINC00661-206ENST00000552608 RGL3Q3MIN7 710 aa15.54■□□□□ 0.08
LINC00661-206ENST00000552608 SLC52A1Q9NWF4 448 aa15.54■□□□□ 0.08
LINC00661-206ENST00000552608 IFT172Q9UG01 1749 aa15.54■□□□□ 0.08
LINC00661-206ENST00000552608 ADGRB3O60242 1522 aa15.53■□□□□ 0.08
LINC00661-206ENST00000552608 ZNF326Q5BKZ1 582 aaKnown RBP15.51■□□□□ 0.07
LINC00661-206ENST00000552608 KDM2AQ9Y2K7 1162 aa15.51■□□□□ 0.07
LINC00661-206ENST00000552608 RALGAPBQ86X10 1494 aa15.51■□□□□ 0.07
LINC00661-206ENST00000552608 ZMYM3Q14202 1370 aa15.5■□□□□ 0.07
LINC00661-206ENST00000552608 TRPM1Q7Z4N2 1603 aa15.5■□□□□ 0.07
LINC00661-206ENST00000552608 PPLO60437 1756 aa15.5■□□□□ 0.07
LINC00661-206ENST00000552608 CHGAP10645 457 aaKnown RBP15.5■□□□□ 0.07
LINC00661-206ENST00000552608 MYOM2P54296 1465 aa15.49■□□□□ 0.07
LINC00661-206ENST00000552608 NBPF8Q3BBV2 869 aa15.49■□□□□ 0.07
LINC00661-206ENST00000552608 PRAG1Q86YV5 1406 aa15.49■□□□□ 0.07
LINC00661-206ENST00000552608 RPGRIP1LQ68CZ1 1315 aa15.48■□□□□ 0.07
LINC00661-206ENST00000552608 MADDQ8WXG6 1647 aa15.48■□□□□ 0.07
LINC00661-206ENST00000552608 KIAA1210Q9ULL0 1709 aa15.48■□□□□ 0.07
LINC00661-206ENST00000552608 C3P01024 1663 aa15.48■□□□□ 0.07
LINC00661-206ENST00000552608 LAMC1P11047 1609 aa15.47■□□□□ 0.07
LINC00661-206ENST00000552608 MYO5BQ9ULV0 1848 aa15.47■□□□□ 0.07
LINC00661-206ENST00000552608 EIF4G2P78344 907 aaKnown RBP eCLIP15.46■□□□□ 0.07
LINC00661-206ENST00000552608 TMEM131LA2VDJ0 1609 aa15.46■□□□□ 0.06
LINC00661-206ENST00000552608 KDM5AP29375 1690 aaKnown RBP15.45■□□□□ 0.06
LINC00661-206ENST00000552608 RIMS1Q86UR5 1692 aaKnown RBP15.45■□□□□ 0.06
LINC00661-206ENST00000552608 FBXO31Q5XUX0 539 aaPredicted RBP15.44■□□□□ 0.06
LINC00661-206ENST00000552608 STAG3Q9UJ98 1225 aa15.44■□□□□ 0.06
LINC00661-206ENST00000552608 ADAMTSL3P82987 1691 aa15.44■□□□□ 0.06
LINC00661-206ENST00000552608 IDI1Q13907 227 aa15.43■□□□□ 0.06
LINC00661-206ENST00000552608 ROCK2O75116 1388 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms