RNA–Protein interactions for RNA: ENST00000552140.5

NPIPA3-203, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

TSL 5 BASIC

Gene NPIPA3, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-203ENST00000552140 ARHGAP5Q13017 1502 aa11.53□□□□□ -0.56
NPIPA3-203ENST00000552140 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.56
NPIPA3-203ENST00000552140 MROH2AA6NES4 1674 aa11.52□□□□□ -0.57
NPIPA3-203ENST00000552140 UPF1Q92900 1129 aaKnown RBP eCLIP11.51□□□□□ -0.57
NPIPA3-203ENST00000552140 POLA2Q14181 598 aa11.5□□□□□ -0.57
NPIPA3-203ENST00000552140 VWDEQ8N2E2 1590 aa11.5□□□□□ -0.57
NPIPA3-203ENST00000552140 CLTCQ00610 1675 aaKnown RBP11.49□□□□□ -0.57
NPIPA3-203ENST00000552140 NEURL4Q96JN8 1562 aa11.49□□□□□ -0.57
NPIPA3-203ENST00000552140 GGT6Q6P531 493 aa11.48□□□□□ -0.57
NPIPA3-203ENST00000552140 A2ML1A8K2U0 1454 aa11.48□□□□□ -0.57
NPIPA3-203ENST00000552140 DNMT1P26358 1616 aaKnown RBP11.48□□□□□ -0.57
NPIPA3-203ENST00000552140 KIF14Q15058 1648 aa11.48□□□□□ -0.57
NPIPA3-203ENST00000552140 KIDINS220Q9ULH0 1771 aa11.47□□□□□ -0.57
NPIPA3-203ENST00000552140 ANKLE2Q86XL3 938 aa11.47□□□□□ -0.57
NPIPA3-203ENST00000552140 LRRC7Q96NW7 1537 aa11.45□□□□□ -0.58
NPIPA3-203ENST00000552140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.45□□□□□ -0.58
NPIPA3-203ENST00000552140 POLR1AO95602 1720 aaPredicted RBP11.45□□□□□ -0.58
NPIPA3-203ENST00000552140 PRKCSHP14314 528 aaPredicted RBP11.44□□□□□ -0.58
NPIPA3-203ENST00000552140 FBXO31Q5XUX0 539 aaPredicted RBP11.44□□□□□ -0.58
NPIPA3-203ENST00000552140 CDK11AQ9UQ88 783 aaPredicted RBP11.44□□□□□ -0.58
NPIPA3-203ENST00000552140 NPHP4O75161 1426 aaPredicted RBP11.43□□□□□ -0.58
NPIPA3-203ENST00000552140 ABCC1P33527 1531 aa11.42□□□□□ -0.58
NPIPA3-203ENST00000552140 TRIM52Q96A61 297 aa11.42□□□□□ -0.58
NPIPA3-203ENST00000552140 STRCP1A6NGW2 1772 aa11.41□□□□□ -0.58
NPIPA3-203ENST00000552140 CDC42BPBQ9Y5S2 1711 aa11.41□□□□□ -0.58
NPIPA3-203ENST00000552140 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
NPIPA3-203ENST00000552140 RNF17Q9BXT8 1623 aaKnown RBP11.41□□□□□ -0.58
NPIPA3-203ENST00000552140 SPAG9O60271 1321 aaKnown RBP11.4□□□□□ -0.58
NPIPA3-203ENST00000552140 ITSN2Q9NZM3 1697 aa11.4□□□□□ -0.58
NPIPA3-203ENST00000552140 THEMISQ8N1K5 641 aaPredicted RBP11.4□□□□□ -0.58
NPIPA3-203ENST00000552140 TROQ12816 1431 aaPredicted RBP11.4□□□□□ -0.58
NPIPA3-203ENST00000552140 ZNF777Q9ULD5 760 aaPredicted RBP11.39□□□□□ -0.59
NPIPA3-203ENST00000552140 TNRQ92752 1358 aa11.39□□□□□ -0.59
NPIPA3-203ENST00000552140 SAMD9LQ8IVG5 1584 aa11.38□□□□□ -0.59
NPIPA3-203ENST00000552140 HNRNPMP52272 730 aaKnown RBP eCLIP11.38□□□□□ -0.59
NPIPA3-203ENST00000552140 MED14O60244 1454 aa11.38□□□□□ -0.59
NPIPA3-203ENST00000552140 CLIP1P30622 1438 aa11.37□□□□□ -0.59
NPIPA3-203ENST00000552140 A2MP01023 1474 aa11.37□□□□□ -0.59
NPIPA3-203ENST00000552140 FAM135BQ49AJ0 1406 aa11.36□□□□□ -0.59
NPIPA3-203ENST00000552140 PREX2Q70Z35 1606 aa11.35□□□□□ -0.59
NPIPA3-203ENST00000552140 IQGAP1P46940 1657 aa11.33□□□□□ -0.6
NPIPA3-203ENST00000552140 SYNMO15061 1565 aa11.33□□□□□ -0.6
NPIPA3-203ENST00000552140 DEPDC5O75140 1603 aa11.33□□□□□ -0.6
NPIPA3-203ENST00000552140 PLXNC1O60486 1568 aa11.33□□□□□ -0.6
NPIPA3-203ENST00000552140 FAM135AQ9P2D6 1515 aa11.32□□□□□ -0.6
NPIPA3-203ENST00000552140 UGGT1Q9NYU2 1555 aa11.32□□□□□ -0.6
NPIPA3-203ENST00000552140 ATP7AQ04656 1500 aa11.31□□□□□ -0.6
NPIPA3-203ENST00000552140 SYCP2Q9BX26 1530 aa11.3□□□□□ -0.6
NPIPA3-203ENST00000552140 MIA2Q96PC5 1412 aa11.3□□□□□ -0.6
NPIPA3-203ENST00000552140 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
NPIPA3-203ENST00000552140 ZNF772Q68DY9 489 aaPredicted RBP11.3□□□□□ -0.6
NPIPA3-203ENST00000552140 XIRP1Q702N8 1843 aaKnown RBP11.3□□□□□ -0.6
NPIPA3-203ENST00000552140 FMN1Q68DA7 1419 aa11.29□□□□□ -0.6
NPIPA3-203ENST00000552140 RXRBP28702 533 aa11.29□□□□□ -0.6
NPIPA3-203ENST00000552140 MEX3CQ5U5Q3 659 aaKnown RBP11.29□□□□□ -0.6
NPIPA3-203ENST00000552140 RBM33Q96EV2 1170 aaKnown RBP11.29□□□□□ -0.6
NPIPA3-203ENST00000552140 ROBO1Q9Y6N7 1651 aa11.28□□□□□ -0.6
NPIPA3-203ENST00000552140 PZPP20742 1482 aa11.28□□□□□ -0.6
NPIPA3-203ENST00000552140 JCADQ9P266 1359 aa11.28□□□□□ -0.6
NPIPA3-203ENST00000552140 NLRP1Q9C000 1473 aa11.27□□□□□ -0.6
NPIPA3-203ENST00000552140 INO80Q9ULG1 1556 aaPredicted RBP11.27□□□□□ -0.61
NPIPA3-203ENST00000552140 WASHC2CQ9Y4E1 1318 aa11.27□□□□□ -0.61
NPIPA3-203ENST00000552140 CDC42BPAQ5VT25 1732 aa11.26□□□□□ -0.61
NPIPA3-203ENST00000552140 KIF3BO15066 747 aa11.26□□□□□ -0.61
NPIPA3-203ENST00000552140 LRP6O75581 1613 aa11.26□□□□□ -0.61
NPIPA3-203ENST00000552140 TMEM94Q12767 1356 aa11.26□□□□□ -0.61
NPIPA3-203ENST00000552140 LRRIQ1Q96JM4 1722 aa11.26□□□□□ -0.61
NPIPA3-203ENST00000552140 ZC3H13Q5T200 1668 aaKnown RBP11.25□□□□□ -0.61
NPIPA3-203ENST00000552140 LTKP29376 864 aa11.25□□□□□ -0.61
NPIPA3-203ENST00000552140 SRCAPQ6ZRS2 3230 aa11.25□□□□□ -0.61
NPIPA3-203ENST00000552140 TXNDC2Q86VQ3 553 aa11.23□□□□□ -0.61
NPIPA3-203ENST00000552140 ZRANB1Q9UGI0 708 aa11.23□□□□□ -0.61
NPIPA3-203ENST00000552140 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
NPIPA3-203ENST00000552140 PHLPP1O60346 1717 aa11.22□□□□□ -0.61
NPIPA3-203ENST00000552140 DHX29Q7Z478 1369 aaKnown RBP11.22□□□□□ -0.61
NPIPA3-203ENST00000552140 PROSER2Q86WR7 435 aaPredicted RBP11.22□□□□□ -0.61
NPIPA3-203ENST00000552140 ADGBQ8N7X0 1667 aa11.22□□□□□ -0.61
NPIPA3-203ENST00000552140 GPATCH8Q9UKJ3 1502 aaKnown RBP11.22□□□□□ -0.61
NPIPA3-203ENST00000552140 SETBP1Q9Y6X0 1596 aa11.21□□□□□ -0.61
NPIPA3-203ENST00000552140 KDM5DQ9BY66 1539 aa11.21□□□□□ -0.61
NPIPA3-203ENST00000552140 ARHGAP35Q9NRY4 1499 aa11.21□□□□□ -0.61
NPIPA3-203ENST00000552140 KIAA1107Q9UPP5 1409 aa11.21□□□□□ -0.61
NPIPA3-203ENST00000552140 NUTM2BA6NNL0 878 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-203ENST00000552140 NUTM2EB1AL46 878 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-203ENST00000552140 HAP1P54257 671 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-203ENST00000552140 NUTM2DQ5VT03 806 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-203ENST00000552140 NUTM2AQ8IVF1 878 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-203ENST00000552140 SLAIN2Q9P270 581 aa11.21□□□□□ -0.61
NPIPA3-203ENST00000552140 CFDP1Q9UEE9 299 aaPredicted RBP11.21□□□□□ -0.61
NPIPA3-203ENST00000552140 SCAF11Q99590 1463 aaKnown RBP11.2□□□□□ -0.62
NPIPA3-203ENST00000552140 SPATA31A6Q5VVP1 1343 aa11.2□□□□□ -0.62
NPIPA3-203ENST00000552140 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
NPIPA3-203ENST00000552140 CDK12Q9NYV4 1490 aaPredicted RBP11.19□□□□□ -0.62
NPIPA3-203ENST00000552140 ZNF644Q9H582 1327 aaPredicted RBP11.19□□□□□ -0.62
NPIPA3-203ENST00000552140 UBTFP17480 764 aaKnown RBP11.18□□□□□ -0.62
NPIPA3-203ENST00000552140 KCNA6P17658 529 aa11.18□□□□□ -0.62
NPIPA3-203ENST00000552140 RBM42Q9BTD8 480 aaKnown RBP11.18□□□□□ -0.62
NPIPA3-203ENST00000552140 MAP3K1Q13233 1512 aa11.18□□□□□ -0.62
NPIPA3-203ENST00000552140 LRRC9Q6ZRR7 1453 aa11.18□□□□□ -0.62
NPIPA3-203ENST00000552140 PLEKHH2Q8IVE3 1493 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms