RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 SYCP2Q9BX26 1530 aa20.98■□□□□ 0.95
SNRPF-204ENST00000552085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.97■□□□□ 0.951e-6■■■■■ 38.1
SNRPF-204ENST00000552085 TNRQ92752 1358 aa20.96■□□□□ 0.95
SNRPF-204ENST00000552085 ADGBQ8N7X0 1667 aa20.95■□□□□ 0.94
SNRPF-204ENST00000552085 EEA1Q15075 1411 aa20.93■□□□□ 0.94
SNRPF-204ENST00000552085 THEMISQ8N1K5 641 aaPredicted RBP20.92■□□□□ 0.94
SNRPF-204ENST00000552085 ZNF777Q9ULD5 760 aaPredicted RBP20.91■□□□□ 0.94
SNRPF-204ENST00000552085 FBXO31Q5XUX0 539 aaPredicted RBP20.9■□□□□ 0.94
SNRPF-204ENST00000552085 XIRP1Q702N8 1843 aaKnown RBP20.9■□□□□ 0.94
SNRPF-204ENST00000552085 UGGT1Q9NYU2 1555 aa20.89■□□□□ 0.94
SNRPF-204ENST00000552085 HNRNPMP52272 730 aaKnown RBP eCLIP20.89■□□□□ 0.93
SNRPF-204ENST00000552085 ARHGAP35Q9NRY4 1499 aa20.88■□□□□ 0.93
SNRPF-204ENST00000552085 FAM135AQ9P2D6 1515 aa20.88■□□□□ 0.93
SNRPF-204ENST00000552085 PZPP20742 1482 aa20.88■□□□□ 0.93
SNRPF-204ENST00000552085 NLRP1Q9C000 1473 aa20.86■□□□□ 0.93
SNRPF-204ENST00000552085 UPF1Q92900 1129 aaKnown RBP eCLIP20.85■□□□□ 0.93
SNRPF-204ENST00000552085 ZC3H13Q5T200 1668 aaKnown RBP20.84■□□□□ 0.93
SNRPF-204ENST00000552085 FAM135BQ49AJ0 1406 aa20.84■□□□□ 0.93
SNRPF-204ENST00000552085 KIAA1107Q9UPP5 1409 aa20.83■□□□□ 0.93
SNRPF-204ENST00000552085 CCDC18Q5T9S5 1454 aa20.81■□□□□ 0.92
SNRPF-204ENST00000552085 PLEKHH2Q8IVE3 1493 aa20.81■□□□□ 0.92
SNRPF-204ENST00000552085 MIA2Q96PC5 1412 aa20.81■□□□□ 0.92
SNRPF-204ENST00000552085 KDM5DQ9BY66 1539 aa20.81■□□□□ 0.92
SNRPF-204ENST00000552085 GPATCH8Q9UKJ3 1502 aaKnown RBP20.8■□□□□ 0.92
SNRPF-204ENST00000552085 ROBO1Q9Y6N7 1651 aa20.78■□□□□ 0.92
SNRPF-204ENST00000552085 DHX29Q7Z478 1369 aaKnown RBP20.73■□□□□ 0.91
SNRPF-204ENST00000552085 WASHC2CQ9Y4E1 1318 aa20.72■□□□□ 0.91
SNRPF-204ENST00000552085 UBTFP17480 764 aaKnown RBP20.71■□□□□ 0.91
SNRPF-204ENST00000552085 CFDP1Q9UEE9 299 aaPredicted RBP20.71■□□□□ 0.91
SNRPF-204ENST00000552085 CASKIN1Q8WXD9 1431 aa20.7■□□□□ 0.9
SNRPF-204ENST00000552085 KIF3BO15066 747 aa20.7■□□□□ 0.9
SNRPF-204ENST00000552085 PHLPP1O60346 1717 aa20.7■□□□□ 0.9
SNRPF-204ENST00000552085 RTEL1-TNFRSF6BF6WH68 1400 aa20.69■□□□□ 0.9
SNRPF-204ENST00000552085 UBR1Q8IWV7 1749 aa20.68■□□□□ 0.9
SNRPF-204ENST00000552085 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
SNRPF-204ENST00000552085 SCAF11Q99590 1463 aaKnown RBP20.67■□□□□ 0.9
SNRPF-204ENST00000552085 JCADQ9P266 1359 aa20.65■□□□□ 0.9
SNRPF-204ENST00000552085 LRRC9Q6ZRR7 1453 aa20.64■□□□□ 0.89
SNRPF-204ENST00000552085 EHMT2Q96KQ7 1210 aa20.64■□□□□ 0.89
SNRPF-204ENST00000552085 CCNB3Q8WWL7 1395 aa20.63■□□□□ 0.89
SNRPF-204ENST00000552085 MBD5Q9P267 1494 aa20.62■□□□□ 0.89
SNRPF-204ENST00000552085 ZNF772Q68DY9 489 aaPredicted RBP20.62■□□□□ 0.89
SNRPF-204ENST00000552085 TMEM94Q12767 1356 aa20.61■□□□□ 0.89
SNRPF-204ENST00000552085 CFAP65Q6ZU64 1925 aaKnown RBP20.6■□□□□ 0.89
SNRPF-204ENST00000552085 MAP3K1Q13233 1512 aa20.59■□□□□ 0.89
SNRPF-204ENST00000552085 SLIT1O75093 1534 aa20.58■□□□□ 0.89
SNRPF-204ENST00000552085 FYCO1Q9BQS8 1478 aa20.58■□□□□ 0.89
SNRPF-204ENST00000552085 ARHGAP23Q9P227 1491 aa20.58■□□□□ 0.89
SNRPF-204ENST00000552085 LRP6O75581 1613 aa20.58■□□□□ 0.89
SNRPF-204ENST00000552085 LTKP29376 864 aa20.58■□□□□ 0.89
SNRPF-204ENST00000552085 ZNF644Q9H582 1327 aaPredicted RBP20.57■□□□□ 0.88
SNRPF-204ENST00000552085 ERVK-7P63135 1459 aa20.57■□□□□ 0.88
SNRPF-204ENST00000552085 TXNDC2Q86VQ3 553 aa20.57■□□□□ 0.88
SNRPF-204ENST00000552085 NCOA2Q15596 1464 aa20.56■□□□□ 0.88
SNRPF-204ENST00000552085 CDK12Q9NYV4 1490 aaPredicted RBP20.56■□□□□ 0.88
SNRPF-204ENST00000552085 MEX3CQ5U5Q3 659 aaKnown RBP20.56■□□□□ 0.88
SNRPF-204ENST00000552085 COL16A1Q07092 1604 aaPredicted RBP20.56■□□□□ 0.88
SNRPF-204ENST00000552085 RXRBP28702 533 aa20.55■□□□□ 0.88
SNRPF-204ENST00000552085 SPATA31A6Q5VVP1 1343 aa20.53■□□□□ 0.88
SNRPF-204ENST00000552085 ABCC3O15438 1527 aa20.53■□□□□ 0.88
SNRPF-204ENST00000552085 TIAM1Q13009 1591 aa20.52■□□□□ 0.88
SNRPF-204ENST00000552085 PROSER2Q86WR7 435 aaPredicted RBP20.51■□□□□ 0.87
SNRPF-204ENST00000552085 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
SNRPF-204ENST00000552085 KCNA6P17658 529 aa20.5■□□□□ 0.87
SNRPF-204ENST00000552085 RBM33Q96EV2 1170 aaKnown RBP20.5■□□□□ 0.87
SNRPF-204ENST00000552085 FGD6Q6ZV73 1430 aa20.5■□□□□ 0.87
SNRPF-204ENST00000552085 PRDM15P57071 1507 aaPredicted RBP20.49■□□□□ 0.87
SNRPF-204ENST00000552085 SHPRHQ149N8 1683 aa20.49■□□□□ 0.87
SNRPF-204ENST00000552085 SLAIN2Q9P270 581 aa20.49■□□□□ 0.87
SNRPF-204ENST00000552085 CCDC141Q6ZP82 1450 aa20.49■□□□□ 0.87
SNRPF-204ENST00000552085 CEP152O94986 1710 aa20.48■□□□□ 0.87
SNRPF-204ENST00000552085 SRCAPQ6ZRS2 3230 aa20.48■□□□□ 0.87
SNRPF-204ENST00000552085 MSH6P52701 1360 aa20.47■□□□□ 0.87
SNRPF-204ENST00000552085 NKTRP30414 1462 aaKnown RBP20.45■□□□□ 0.86
SNRPF-204ENST00000552085 NWD1Q149M9 1564 aa20.45■□□□□ 0.86
SNRPF-204ENST00000552085 MTUS2Q5JR59 1369 aa20.44■□□□□ 0.86
SNRPF-204ENST00000552085 PIK3C2BO00750 1634 aa20.42■□□□□ 0.86
SNRPF-204ENST00000552085 CAMSAP2Q08AD1 1489 aa20.42■□□□□ 0.86
SNRPF-204ENST00000552085 TET3O43151 1660 aa20.42■□□□□ 0.86
SNRPF-204ENST00000552085 KDM5AP29375 1690 aaKnown RBP20.42■□□□□ 0.86
SNRPF-204ENST00000552085 TMEM2Q9UHN6 1383 aa20.41■□□□□ 0.86
SNRPF-204ENST00000552085 MROH1Q8NDA8 1641 aa20.41■□□□□ 0.86
SNRPF-204ENST00000552085 EIF2AK4Q9P2K8 1649 aaKnown RBP20.41■□□□□ 0.86
SNRPF-204ENST00000552085 RSPH4AQ5TD94 716 aa20.4■□□□□ 0.86
SNRPF-204ENST00000552085 AHDC1Q5TGY3 1603 aaPredicted RBP20.39■□□□□ 0.86
SNRPF-204ENST00000552085 RGS12O14924 1447 aa20.39■□□□□ 0.85
SNRPF-204ENST00000552085 SLC26A8Q96RN1 970 aa20.38■□□□□ 0.85
SNRPF-204ENST00000552085 ZRANB1Q9UGI0 708 aa20.38■□□□□ 0.85
SNRPF-204ENST00000552085 FOXD1Q16676 465 aa20.37■□□□□ 0.85
SNRPF-204ENST00000552085 SETBP1Q9Y6X0 1596 aa20.37■□□□□ 0.85
SNRPF-204ENST00000552085 AFF2P51816 1311 aa20.36■□□□□ 0.85
SNRPF-204ENST00000552085 ARHGEF5Q12774 1597 aa20.34■□□□□ 0.85
SNRPF-204ENST00000552085 EHBP1L1Q8N3D4 1523 aa20.34■□□□□ 0.85
SNRPF-204ENST00000552085 NUTM2BA6NNL0 878 aaPredicted RBP20.34■□□□□ 0.85
SNRPF-204ENST00000552085 NUTM2EB1AL46 878 aaPredicted RBP20.34■□□□□ 0.85
SNRPF-204ENST00000552085 NUTM2DQ5VT03 806 aaPredicted RBP20.34■□□□□ 0.85
SNRPF-204ENST00000552085 NUTM2AQ8IVF1 878 aaPredicted RBP20.34■□□□□ 0.85
SNRPF-204ENST00000552085 CHD2O14647 1828 aaKnown RBP20.34■□□□□ 0.85
SNRPF-204ENST00000552085 EFCAB6Q5THR3 1501 aa20.33■□□□□ 0.85
SNRPF-204ENST00000552085 DIP2AQ14689 1571 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms