RNA–Protein interactions for RNA: ENST00000552004.2

RACGAP1-225, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-225	ENST00000552004	NCKAP5L	Q9HCH0	1330 aa		33.23	■■■□□ 2.91
RACGAP1-225	ENST00000552004	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.22	■■■□□ 2.91
RACGAP1-225	ENST00000552004	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.21	■■■□□ 2.91
RACGAP1-225	ENST00000552004	KDM5D	Q9BY66	1539 aa		33.2	■■■□□ 2.91
RACGAP1-225	ENST00000552004	ZNF142	P52746	1687 aa	Predicted RBP	33.2	■■■□□ 2.9
RACGAP1-225	ENST00000552004	MAST1	Q9Y2H9	1570 aa		33.19	■■■□□ 2.9
RACGAP1-225	ENST00000552004	FAM135A	Q9P2D6	1515 aa		33.17	■■■□□ 2.9
RACGAP1-225	ENST00000552004	PZP	P20742	1482 aa		33.14	■■■□□ 2.9
RACGAP1-225	ENST00000552004	PLA2R1	Q13018	1463 aa		33.14	■■■□□ 2.9
RACGAP1-225	ENST00000552004	TNR	Q92752	1358 aa		33.14	■■■□□ 2.9
RACGAP1-225	ENST00000552004	PKD2	Q13563	968 aa		33.14	■■■□□ 2.9
RACGAP1-225	ENST00000552004	A2ML1	A8K2U0	1454 aa		33.13	■■■□□ 2.89
RACGAP1-225	ENST00000552004	LTBP4	Q8N2S1	1624 aa		33.1	■■■□□ 2.89
RACGAP1-225	ENST00000552004	TCOF1	Q13428	1488 aa	Known RBP	33.1	■■■□□ 2.89
RACGAP1-225	ENST00000552004	DNMT1	P26358	1616 aa	Known RBP	33.07	■■■□□ 2.88
RACGAP1-225	ENST00000552004	RNF17	Q9BXT8	1623 aa	Known RBP	33.06	■■■□□ 2.88
RACGAP1-225	ENST00000552004	ABCC5	O15440	1437 aa		33.05	■■■□□ 2.88
RACGAP1-225	ENST00000552004	PTPN23	Q9H3S7	1636 aa		33.04	■■■□□ 2.88
RACGAP1-225	ENST00000552004	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.03	■■■□□ 2.88
RACGAP1-225	ENST00000552004	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.02	■■■□□ 2.88
RACGAP1-225	ENST00000552004	ABCC3	O15438	1527 aa		33.02	■■■□□ 2.88
RACGAP1-225	ENST00000552004	DUOX2	Q9NRD8	1548 aa		33.02	■■■□□ 2.88
RACGAP1-225	ENST00000552004	FGD6	Q6ZV73	1430 aa		33.02	■■■□□ 2.88
RACGAP1-225	ENST00000552004	RRP7BP	Q9NSQ0	103 aa		33.01	■■■□□ 2.87
RACGAP1-225	ENST00000552004	KIF15	Q9NS87	1388 aa		33	■■■□□ 2.87
RACGAP1-225	ENST00000552004	SHANK2	Q9UPX8	1470 aa		32.99	■■■□□ 2.87
RACGAP1-225	ENST00000552004	DAPK1	P53355	1430 aa		32.97	■■■□□ 2.87
RACGAP1-225	ENST00000552004	MROH1	Q8NDA8	1641 aa		32.97	■■■□□ 2.87
RACGAP1-225	ENST00000552004	NLRP1	Q9C000	1473 aa		32.96	■■■□□ 2.87
RACGAP1-225	ENST00000552004	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.95	■■■□□ 2.87
RACGAP1-225	ENST00000552004	CROCC2	H7BZ55	1655 aa		32.94	■■■□□ 2.86
RACGAP1-225	ENST00000552004	ZC3H13	Q5T200	1668 aa	Known RBP	32.94	■■■□□ 2.86
RACGAP1-225	ENST00000552004	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.94	■■■□□ 2.86
RACGAP1-225	ENST00000552004	IQSEC2	Q5JU85	1478 aa		32.93	■■■□□ 2.86
RACGAP1-225	ENST00000552004	ANKLE2	Q86XL3	938 aa		32.91	■■■□□ 2.86
RACGAP1-225	ENST00000552004	CHIC2	Q9UKJ5	165 aa		32.91	■■■□□ 2.86
RACGAP1-225	ENST00000552004	ERBIN	Q96RT1	1412 aa		32.9	■■■□□ 2.86
RACGAP1-225	ENST00000552004	UGGT1	Q9NYU2	1555 aa		32.9	■■■□□ 2.86
RACGAP1-225	ENST00000552004	SPATA31D1	Q6ZQQ2	1576 aa		32.89	■■■□□ 2.86
RACGAP1-225	ENST00000552004	ERVK-7	P63135	1459 aa		32.88	■■■□□ 2.85
RACGAP1-225	ENST00000552004	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.87	■■■□□ 2.85	5e-9	■□□□□ 10.1
RACGAP1-225	ENST00000552004	CEP152	O94986	1710 aa		32.87	■■■□□ 2.85
RACGAP1-225	ENST00000552004	NEURL4	Q96JN8	1562 aa		32.87	■■■□□ 2.85
RACGAP1-225	ENST00000552004	POLR1A	O95602	1720 aa	Predicted RBP	32.85	■■■□□ 2.85
RACGAP1-225	ENST00000552004	ANKRD30A	Q9BXX3	1397 aa		32.84	■■■□□ 2.85
RACGAP1-225	ENST00000552004	PRDM15	P57071	1507 aa	Predicted RBP	32.83	■■■□□ 2.85
RACGAP1-225	ENST00000552004	FAM50A	Q14320	339 aa	Known RBP	32.81	■■■□□ 2.84
RACGAP1-225	ENST00000552004	CFAP65	Q6ZU64	1925 aa	Known RBP	32.79	■■■□□ 2.84
RACGAP1-225	ENST00000552004	ARHGAP31	Q2M1Z3	1444 aa		32.78	■■■□□ 2.84
RACGAP1-225	ENST00000552004	UBAP1L	F5GYI3	381 aa		32.78	■■■□□ 2.84
RACGAP1-225	ENST00000552004	KANK1	Q14678	1352 aa		32.77	■■■□□ 2.84
RACGAP1-225	ENST00000552004	NPHP4	O75161	1426 aa	Predicted RBP	32.77	■■■□□ 2.84
RACGAP1-225	ENST00000552004	MED14	O60244	1454 aa		32.75	■■■□□ 2.83
RACGAP1-225	ENST00000552004	DEPDC5	O75140	1603 aa		32.75	■■■□□ 2.83
RACGAP1-225	ENST00000552004	ADGRL2	O95490	1459 aa		32.7	■■■□□ 2.83
RACGAP1-225	ENST00000552004	CPS1	P31327	1500 aa		32.67	■■■□□ 2.82
RACGAP1-225	ENST00000552004	VWDE	Q8N2E2	1590 aa		32.67	■■■□□ 2.82
RACGAP1-225	ENST00000552004	UBR1	Q8IWV7	1749 aa		32.67	■■■□□ 2.82
RACGAP1-225	ENST00000552004	LMTK2	Q8IWU2	1503 aa		32.65	■■■□□ 2.82
RACGAP1-225	ENST00000552004	IQGAP1	P46940	1657 aa		32.65	■■■□□ 2.82
RACGAP1-225	ENST00000552004	LTK	P29376	864 aa		32.61	■■■□□ 2.81
RACGAP1-225	ENST00000552004	TXNDC2	Q86VQ3	553 aa		32.61	■■■□□ 2.81
RACGAP1-225	ENST00000552004	ANKRD50	Q9ULJ7	1429 aa		32.6	■■■□□ 2.81
RACGAP1-225	ENST00000552004	SCAF11	Q99590	1463 aa	Known RBP	32.6	■■■□□ 2.81
RACGAP1-225	ENST00000552004	DISP3	Q9P2K9	1392 aa		32.59	■■■□□ 2.81
RACGAP1-225	ENST00000552004	ARHGAP23	Q9P227	1491 aa		32.59	■■■□□ 2.81
RACGAP1-225	ENST00000552004	STAG3	Q9UJ98	1225 aa		32.58	■■■□□ 2.81
RACGAP1-225	ENST00000552004	SLIT1	O75093	1534 aa		32.57	■■■□□ 2.8
RACGAP1-225	ENST00000552004	IDI1	Q13907	227 aa		32.57	■■■□□ 2.8
RACGAP1-225	ENST00000552004	PIK3C2B	O00750	1634 aa		32.56	■■■□□ 2.8
RACGAP1-225	ENST00000552004	TOM1	O60784	492 aa		32.55	■■■□□ 2.8
RACGAP1-225	ENST00000552004	EID1	Q9Y6B2	187 aa		32.55	■■■□□ 2.8
RACGAP1-225	ENST00000552004	PIP4K2B	P78356	416 aa		32.54	■■■□□ 2.8
RACGAP1-225	ENST00000552004	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.54	■■■□□ 2.8
RACGAP1-225	ENST00000552004	EFCAB6	Q5THR3	1501 aa		32.54	■■■□□ 2.8
RACGAP1-225	ENST00000552004	SCAF1	Q9H7N4	1312 aa	Known RBP	32.53	■■■□□ 2.8
RACGAP1-225	ENST00000552004	TMEM2	Q9UHN6	1383 aa		32.52	■■■□□ 2.8
RACGAP1-225	ENST00000552004	NOS1	P29475	1434 aa		32.51	■■■□□ 2.8
RACGAP1-225	ENST00000552004	SYNM	O15061	1565 aa		32.51	■■■□□ 2.79
RACGAP1-225	ENST00000552004	STRCP1	A6NGW2	1772 aa		32.48	■■■□□ 2.79
RACGAP1-225	ENST00000552004	LRRC7	Q96NW7	1537 aa		32.46	■■■□□ 2.79
RACGAP1-225	ENST00000552004	ITGAE	P38570	1179 aa		32.45	■■■□□ 2.79
RACGAP1-225	ENST00000552004	SLC52A1	Q9NWF4	448 aa		32.45	■■■□□ 2.79
RACGAP1-225	ENST00000552004	ROCK1	Q13464	1354 aa		32.45	■■■□□ 2.78
RACGAP1-225	ENST00000552004	HSPA1L	P34931	641 aa		32.43	■■■□□ 2.78
RACGAP1-225	ENST00000552004	KDM5A	P29375	1690 aa	Known RBP	32.43	■■■□□ 2.78
RACGAP1-225	ENST00000552004	RPRD2	Q5VT52	1461 aa	Known RBP	32.42	■■■□□ 2.78
RACGAP1-225	ENST00000552004	ILDR2	Q71H61	639 aa		32.41	■■■□□ 2.78
RACGAP1-225	ENST00000552004	ADGRB3	O60242	1522 aa		32.38	■■■□□ 2.77
RACGAP1-225	ENST00000552004	TET3	O43151	1660 aa		32.37	■■■□□ 2.77
RACGAP1-225	ENST00000552004	ALK	Q9UM73	1620 aa		32.37	■■■□□ 2.77
RACGAP1-225	ENST00000552004	UNC13B	O14795	1591 aa		32.36	■■■□□ 2.77
RACGAP1-225	ENST00000552004	SLC26A8	Q96RN1	970 aa		32.34	■■■□□ 2.77
RACGAP1-225	ENST00000552004	GCC2	Q8IWJ2	1684 aa		32.3	■■■□□ 2.76
RACGAP1-225	ENST00000552004	BCAN	Q96GW7	911 aa		32.28	■■■□□ 2.76
RACGAP1-225	ENST00000552004	NUP155	O75694	1391 aa		32.28	■■■□□ 2.76
RACGAP1-225	ENST00000552004	KCNA6	P17658	529 aa		32.27	■■■□□ 2.76
RACGAP1-225	ENST00000552004	SENP3	Q9H4L4	574 aa	Predicted RBP	32.27	■■■□□ 2.76
RACGAP1-225	ENST00000552004	CHGA	P10645	457 aa	Known RBP	32.25	■■■□□ 2.75
RACGAP1-225	ENST00000552004	IQGAP3	Q86VI3	1631 aa		32.25	■■■□□ 2.75

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