RNA–Protein interactions for RNA: ENST00000551436.1

KRT4-203, Transcript of keratin 4, humanhuman

TSL 2

Gene KRT4, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-203ENST00000551436 PCDH10Q9P2E7 1040 aa14.27□□□□□ -0.13
KRT4-203ENST00000551436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.26□□□□□ -0.13
KRT4-203ENST00000551436 MYO5CQ9NQX4 1742 aa14.26□□□□□ -0.13
KRT4-203ENST00000551436 PREX2Q70Z35 1606 aa14.25□□□□□ -0.13
KRT4-203ENST00000551436 FANCAO15360 1455 aa14.25□□□□□ -0.13
KRT4-203ENST00000551436 ZNF644Q9H582 1327 aaPredicted RBP14.24□□□□□ -0.13
KRT4-203ENST00000551436 POTEFA5A3E0 1075 aa14.24□□□□□ -0.13
KRT4-203ENST00000551436 PLEKHH2Q8IVE3 1493 aa14.24□□□□□ -0.13
KRT4-203ENST00000551436 CDC42BPAQ5VT25 1732 aa14.24□□□□□ -0.13
KRT4-203ENST00000551436 PTPN23Q9H3S7 1636 aa14.23□□□□□ -0.13
KRT4-203ENST00000551436 MAP3K4Q9Y6R4 1608 aa14.23□□□□□ -0.13
KRT4-203ENST00000551436 RSPH4AQ5TD94 716 aa14.23□□□□□ -0.13
KRT4-203ENST00000551436 KIF12Q96FN5 646 aa14.23□□□□□ -0.13
KRT4-203ENST00000551436 TCOF1Q13428 1488 aaKnown RBP14.23□□□□□ -0.13
KRT4-203ENST00000551436 FAM163AQ96GL9 167 aaPredicted RBP14.22□□□□□ -0.13
KRT4-203ENST00000551436 TRPC6Q9Y210 931 aa14.22□□□□□ -0.13
KRT4-203ENST00000551436 CAMSAP2Q08AD1 1489 aa14.22□□□□□ -0.13
KRT4-203ENST00000551436 TEX14Q8IWB6 1497 aa14.22□□□□□ -0.13
KRT4-203ENST00000551436 ITGAEP38570 1179 aa14.21□□□□□ -0.13
KRT4-203ENST00000551436 KIAA1107Q9UPP5 1409 aa14.21□□□□□ -0.13
KRT4-203ENST00000551436 CDC42BPBQ9Y5S2 1711 aa14.21□□□□□ -0.14
KRT4-203ENST00000551436 NEO1Q92859 1461 aa14.2□□□□□ -0.14
KRT4-203ENST00000551436 HNRNPMP52272 730 aaKnown RBP eCLIP14.2□□□□□ -0.14
KRT4-203ENST00000551436 PROM2Q8N271 834 aa14.2□□□□□ -0.14
KRT4-203ENST00000551436 BMP2KQ9NSY1 1161 aaPredicted RBP14.2□□□□□ -0.14
KRT4-203ENST00000551436 AKNAQ7Z591 1439 aa14.2□□□□□ -0.14
KRT4-203ENST00000551436 CFAP74Q9C0B2 1584 aa14.19□□□□□ -0.14
KRT4-203ENST00000551436 TSPY4P0CV99 314 aa14.19□□□□□ -0.14
KRT4-203ENST00000551436 TSPY10P0CW01 314 aa14.19□□□□□ -0.14
KRT4-203ENST00000551436 SCUBE2Q9NQ36 999 aa14.19□□□□□ -0.14
KRT4-203ENST00000551436 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
KRT4-203ENST00000551436 ADGRL1O94910 1474 aa14.18□□□□□ -0.14
KRT4-203ENST00000551436 KIF13AQ9H1H9 1805 aa14.18□□□□□ -0.14
KRT4-203ENST00000551436 SAMD9LQ8IVG5 1584 aa14.17□□□□□ -0.14
KRT4-203ENST00000551436 SCAPERQ9BY12 1400 aa14.16□□□□□ -0.14
KRT4-203ENST00000551436 ABCC1P33527 1531 aa14.15□□□□□ -0.14
KRT4-203ENST00000551436 MBD5Q9P267 1494 aa14.14□□□□□ -0.15
KRT4-203ENST00000551436 SYCP2Q9BX26 1530 aa14.14□□□□□ -0.15
KRT4-203ENST00000551436 DAPK1P53355 1430 aa14.14□□□□□ -0.15
KRT4-203ENST00000551436 CCDC141Q6ZP82 1450 aa14.13□□□□□ -0.15
KRT4-203ENST00000551436 ABCC5O15440 1437 aa14.13□□□□□ -0.15
KRT4-203ENST00000551436 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
KRT4-203ENST00000551436 DENND4BO75064 1496 aaPredicted RBP14.12□□□□□ -0.15
KRT4-203ENST00000551436 MAP3K13O43283 966 aa14.12□□□□□ -0.15
KRT4-203ENST00000551436 AFAP1Q8N556 730 aa14.12□□□□□ -0.15
KRT4-203ENST00000551436 CHIC2Q9UKJ5 165 aa14.12□□□□□ -0.15
KRT4-203ENST00000551436 ARHGEF12Q9NZN5 1544 aa14.11□□□□□ -0.15
KRT4-203ENST00000551436 TSPOAP1O95153 1857 aa14.11□□□□□ -0.15
KRT4-203ENST00000551436 MYT1LQ9UL68 1186 aa14.11□□□□□ -0.15
KRT4-203ENST00000551436 DNMT1P26358 1616 aaKnown RBP14.11□□□□□ -0.15
KRT4-203ENST00000551436 ZNF518AQ6AHZ1 1483 aa14.11□□□□□ -0.15
KRT4-203ENST00000551436 SPAG9O60271 1321 aaKnown RBP14.11□□□□□ -0.15
KRT4-203ENST00000551436 TRAPPC8Q9Y2L5 1435 aa14.1□□□□□ -0.15
KRT4-203ENST00000551436 PPRC1Q5VV67 1664 aaKnown RBP14.1□□□□□ -0.15
KRT4-203ENST00000551436 POGZQ7Z3K3 1410 aa14.09□□□□□ -0.15
KRT4-203ENST00000551436 RAPGEF3O95398 923 aa14.09□□□□□ -0.15
KRT4-203ENST00000551436 SHANK2Q9UPX8 1470 aa14.09□□□□□ -0.15
KRT4-203ENST00000551436 ANKRD30AQ9BXX3 1397 aa14.09□□□□□ -0.15
KRT4-203ENST00000551436 C9orf84Q5VXU9 1444 aa14.08□□□□□ -0.15
KRT4-203ENST00000551436 ROCK1Q13464 1354 aa14.08□□□□□ -0.16
KRT4-203ENST00000551436 PTPRKQ15262 1439 aa14.07□□□□□ -0.16
KRT4-203ENST00000551436 TIE1P35590 1138 aa14.07□□□□□ -0.16
KRT4-203ENST00000551436 RASEFQ8IZ41 740 aa14.07□□□□□ -0.16
KRT4-203ENST00000551436 COLQQ9Y215 455 aaPredicted RBP14.07□□□□□ -0.16
KRT4-203ENST00000551436 RTEL1-TNFRSF6BF6WH68 1400 aa14.07□□□□□ -0.16
KRT4-203ENST00000551436 RRP7BPQ9NSQ0 103 aa14.05□□□□□ -0.16
KRT4-203ENST00000551436 NCOA1Q15788 1441 aa14.04□□□□□ -0.16
KRT4-203ENST00000551436 ADGRL2O95490 1459 aa14.03□□□□□ -0.16
KRT4-203ENST00000551436 MLH3Q9UHC1 1453 aa14.03□□□□□ -0.16
KRT4-203ENST00000551436 MAST1Q9Y2H9 1570 aa14.03□□□□□ -0.16
KRT4-203ENST00000551436 CROCC2H7BZ55 1655 aa14.03□□□□□ -0.16
KRT4-203ENST00000551436 KDM5CP41229 1560 aa14.02□□□□□ -0.16
KRT4-203ENST00000551436 HFM1A2PYH4 1435 aa14.02□□□□□ -0.16
KRT4-203ENST00000551436 TTLL13PA6NNM8 815 aa14.02□□□□□ -0.17
KRT4-203ENST00000551436 MAGI2Q86UL8 1455 aa14.01□□□□□ -0.17
KRT4-203ENST00000551436 SETD5Q9C0A6 1442 aa14.01□□□□□ -0.17
KRT4-203ENST00000551436 KIF15Q9NS87 1388 aa14.01□□□□□ -0.17
KRT4-203ENST00000551436 ACIN1Q9UKV3 1341 aaKnown RBP14.01□□□□□ -0.17
KRT4-203ENST00000551436 ATP7AQ04656 1500 aa14□□□□□ -0.17
KRT4-203ENST00000551436 COL17A1Q9UMD9 1497 aaPredicted RBP14□□□□□ -0.17
KRT4-203ENST00000551436 NAIPQ13075 1403 aa13.99□□□□□ -0.17
KRT4-203ENST00000551436 ZFYVE16Q7Z3T8 1539 aa13.99□□□□□ -0.17
KRT4-203ENST00000551436 RICTORQ6R327 1708 aa13.98□□□□□ -0.17
KRT4-203ENST00000551436 ADGBQ8N7X0 1667 aa13.98□□□□□ -0.17
KRT4-203ENST00000551436 KDM6BO15054 1643 aa13.98□□□□□ -0.17
KRT4-203ENST00000551436 HECW2Q9P2P5 1572 aa13.98□□□□□ -0.17
KRT4-203ENST00000551436 INO80Q9ULG1 1556 aaPredicted RBP13.98□□□□□ -0.17
KRT4-203ENST00000551436 HRCP23327 699 aa13.98□□□□□ -0.17
KRT4-203ENST00000551436 ZMYM4Q5VZL5 1548 aa13.98□□□□□ -0.17
KRT4-203ENST00000551436 PLXNC1O60486 1568 aa13.97□□□□□ -0.17
KRT4-203ENST00000551436 SEC24BO95487 1268 aa13.97□□□□□ -0.17
KRT4-203ENST00000551436 MIER1Q8N108 512 aa13.97□□□□□ -0.17
KRT4-203ENST00000551436 ANKRD50Q9ULJ7 1429 aa13.97□□□□□ -0.17
KRT4-203ENST00000551436 FRMPD1Q5SYB0 1578 aa13.96□□□□□ -0.17
KRT4-203ENST00000551436 DUOX2Q9NRD8 1548 aa13.96□□□□□ -0.17
KRT4-203ENST00000551436 DHX29Q7Z478 1369 aaKnown RBP13.96□□□□□ -0.18
KRT4-203ENST00000551436 RAB3GAP2Q9H2M9 1393 aa13.96□□□□□ -0.18
KRT4-203ENST00000551436 ERBINQ96RT1 1412 aa13.94□□□□□ -0.18
KRT4-203ENST00000551436 KIDINS220Q9ULH0 1771 aa13.94□□□□□ -0.18
KRT4-203ENST00000551436 ATP10AO60312 1499 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms