RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 KANK1Q14678 1352 aa15.27■□□□□ 0.04
NEK3-203ENST00000551355 KIF3BO15066 747 aa15.27■□□□□ 0.04
NEK3-203ENST00000551355 MPHOSPH9Q99550 1183 aa15.27■□□□□ 0.04
NEK3-203ENST00000551355 REREQ9P2R6 1566 aa15.27■□□□□ 0.03
NEK3-203ENST00000551355 ABCA6Q8N139 1617 aa15.26■□□□□ 0.03
NEK3-203ENST00000551355 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
NEK3-203ENST00000551355 KDM5DQ9BY66 1539 aa15.26■□□□□ 0.03
NEK3-203ENST00000551355 ZEB1P37275 1124 aaPredicted RBP15.25■□□□□ 0.03
NEK3-203ENST00000551355 PPP6R1Q9UPN7 881 aa15.25■□□□□ 0.03
NEK3-203ENST00000551355 ARHGEF40Q8TER5 1519 aa15.24■□□□□ 0.03
NEK3-203ENST00000551355 UNC13BO14795 1591 aa15.24■□□□□ 0.03
NEK3-203ENST00000551355 AGLP35573 1532 aa15.23■□□□□ 0.03
NEK3-203ENST00000551355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.22■□□□□ 0.037e-6■■■□□ 15
NEK3-203ENST00000551355 BCORL1Q5H9F3 1711 aa15.22■□□□□ 0.03
NEK3-203ENST00000551355 PZPP20742 1482 aa15.2■□□□□ 0.02
NEK3-203ENST00000551355 DEPDC5O75140 1603 aa15.2■□□□□ 0.02
NEK3-203ENST00000551355 PRDM15P57071 1507 aaPredicted RBP15.19■□□□□ 0.02
NEK3-203ENST00000551355 FAM135AQ9P2D6 1515 aa15.19■□□□□ 0.02
NEK3-203ENST00000551355 RNF17Q9BXT8 1623 aaKnown RBP15.19■□□□□ 0.02
NEK3-203ENST00000551355 PKD2Q13563 968 aa15.18■□□□□ 0.02
NEK3-203ENST00000551355 GGT6Q6P531 493 aa15.18■□□□□ 0.02
NEK3-203ENST00000551355 IQGAP3Q86VI3 1631 aa15.17■□□□□ 0.02
NEK3-203ENST00000551355 VWDEQ8N2E2 1590 aa15.16■□□□□ 0.02
NEK3-203ENST00000551355 LMTK2Q8IWU2 1503 aa15.16■□□□□ 0.02
NEK3-203ENST00000551355 WASHC2CQ9Y4E1 1318 aa15.16■□□□□ 0.02
NEK3-203ENST00000551355 TIMELESSQ9UNS1 1208 aa15.14■□□□□ 0.01
NEK3-203ENST00000551355 ARID4BQ4LE39 1312 aaPredicted RBP15.14■□□□□ 0.01
NEK3-203ENST00000551355 ANKRD30BQ9BXX2 1392 aa15.13■□□□□ 0.01
NEK3-203ENST00000551355 MROH1Q8NDA8 1641 aa15.13■□□□□ 0.01
NEK3-203ENST00000551355 ESF1Q9H501 851 aaKnown RBP15.11■□□□□ 0.01
NEK3-203ENST00000551355 RPRD2Q5VT52 1461 aaKnown RBP15.11■□□□□ 0.01
NEK3-203ENST00000551355 TET3O43151 1660 aa15.09■□□□□ 0.01
NEK3-203ENST00000551355 ARHGAP31Q2M1Z3 1444 aa15.09■□□□□ 0.01
NEK3-203ENST00000551355 ABCC3O15438 1527 aa15.09■□□□□ 0.01
NEK3-203ENST00000551355 ZC3H13Q5T200 1668 aaKnown RBP15.09■□□□□ 0.01
NEK3-203ENST00000551355 FOXD1Q16676 465 aa15.08■□□□□ 0
NEK3-203ENST00000551355 CNTLNQ9NXG0 1405 aa15.08■□□□□ 0
NEK3-203ENST00000551355 EFCAB6Q5THR3 1501 aa15.07■□□□□ 0
NEK3-203ENST00000551355 PTPRTO14522 1441 aa15.06■□□□□ 0
NEK3-203ENST00000551355 NEUROD1Q13562 356 aa15.05■□□□□ -0
NEK3-203ENST00000551355 MLECQ14165 292 aa15.05■□□□□ -0
NEK3-203ENST00000551355 SIN3AQ96ST3 1273 aa15.05■□□□□ -0
NEK3-203ENST00000551355 CCDC144AA2RUR9 1427 aa15.04■□□□□ -0
NEK3-203ENST00000551355 NPATQ14207 1427 aa15.03■□□□□ -0
NEK3-203ENST00000551355 TONSLQ96HA7 1378 aa15.02■□□□□ -0
NEK3-203ENST00000551355 PLA2R1Q13018 1463 aa15.01□□□□□ -0.01
NEK3-203ENST00000551355 E9PCH4 1651 aa15.01□□□□□ -0.01
NEK3-203ENST00000551355 TRPM2O94759 1503 aa15.01□□□□□ -0.01
NEK3-203ENST00000551355 SIGLEC1Q9BZZ2 1709 aa15□□□□□ -0.01
NEK3-203ENST00000551355 CAMSAP1Q5T5Y3 1602 aa15□□□□□ -0.01
NEK3-203ENST00000551355 SLC52A1Q9NWF4 448 aa15□□□□□ -0.01
NEK3-203ENST00000551355 ZMYM3Q14202 1370 aa14.99□□□□□ -0.01
NEK3-203ENST00000551355 CEP152O94986 1710 aa14.99□□□□□ -0.01
NEK3-203ENST00000551355 NOS1P29475 1434 aa14.99□□□□□ -0.01
NEK3-203ENST00000551355 STAC3Q96MF2 364 aa14.97□□□□□ -0.01
NEK3-203ENST00000551355 ERVK-7P63135 1459 aa14.95□□□□□ -0.02
NEK3-203ENST00000551355 SPHKAPQ2M3C7 1700 aa14.95□□□□□ -0.02
NEK3-203ENST00000551355 MROH2AA6NES4 1674 aa14.94□□□□□ -0.02
NEK3-203ENST00000551355 CLTCQ00610 1675 aaKnown RBP14.94□□□□□ -0.02
NEK3-203ENST00000551355 NEURL4Q96JN8 1562 aa14.94□□□□□ -0.02
NEK3-203ENST00000551355 PPP1R15AO75807 674 aaPredicted RBP14.93□□□□□ -0.02
NEK3-203ENST00000551355 L3MBTL2Q969R5 705 aa14.93□□□□□ -0.02
NEK3-203ENST00000551355 SPATA31D1Q6ZQQ2 1576 aa14.92□□□□□ -0.02
NEK3-203ENST00000551355 FBXO31Q5XUX0 539 aaPredicted RBP14.91□□□□□ -0.02
NEK3-203ENST00000551355 SPATA31E1Q6ZUB1 1445 aa14.91□□□□□ -0.02
NEK3-203ENST00000551355 RPGRIP1LQ68CZ1 1315 aa14.9□□□□□ -0.02
NEK3-203ENST00000551355 TNRQ92752 1358 aa14.89□□□□□ -0.03
NEK3-203ENST00000551355 IDI1Q13907 227 aa14.89□□□□□ -0.03
NEK3-203ENST00000551355 PREX1Q8TCU6 1659 aa14.89□□□□□ -0.03
NEK3-203ENST00000551355 CLTCL1P53675 1640 aa14.88□□□□□ -0.03
NEK3-203ENST00000551355 ADAMTSL3P82987 1691 aa14.88□□□□□ -0.03
NEK3-203ENST00000551355 FER1L4A9Z1Z3 1794 aa14.88□□□□□ -0.03
NEK3-203ENST00000551355 SYNMO15061 1565 aa14.87□□□□□ -0.03
NEK3-203ENST00000551355 RGL3Q3MIN7 710 aa14.87□□□□□ -0.03
NEK3-203ENST00000551355 DCAF11Q8TEB1 546 aa14.87□□□□□ -0.03
NEK3-203ENST00000551355 PIK3C2BO00750 1634 aa14.87□□□□□ -0.03
NEK3-203ENST00000551355 STAG3Q9UJ98 1225 aa14.86□□□□□ -0.03
NEK3-203ENST00000551355 NLRP1Q9C000 1473 aa14.86□□□□□ -0.03
NEK3-203ENST00000551355 CHGAP10645 457 aaKnown RBP14.85□□□□□ -0.03
NEK3-203ENST00000551355 MADDQ8WXG6 1647 aa14.84□□□□□ -0.03
NEK3-203ENST00000551355 ADGRB3O60242 1522 aa14.84□□□□□ -0.03
NEK3-203ENST00000551355 ZNF326Q5BKZ1 582 aaKnown RBP14.84□□□□□ -0.03
NEK3-203ENST00000551355 UGGT1Q9NYU2 1555 aa14.84□□□□□ -0.03
NEK3-203ENST00000551355 UHRF1BP1Q6BDS2 1440 aa14.83□□□□□ -0.03
NEK3-203ENST00000551355 CEBPAP49715 358 aaPredicted RBP14.83□□□□□ -0.04
NEK3-203ENST00000551355 HDGFP51858 240 aaKnown RBP14.83□□□□□ -0.04
NEK3-203ENST00000551355 VGFO15240 615 aaPredicted RBP14.82□□□□□ -0.04
NEK3-203ENST00000551355 C3P01024 1663 aa14.81□□□□□ -0.04
NEK3-203ENST00000551355 KIF1BO60333 1816 aa14.81□□□□□ -0.04
NEK3-203ENST00000551355 KDM2AQ9Y2K7 1162 aa14.81□□□□□ -0.04
NEK3-203ENST00000551355 PTPRMP28827 1452 aa14.8□□□□□ -0.04
NEK3-203ENST00000551355 MYOM2P54296 1465 aa14.8□□□□□ -0.04
NEK3-203ENST00000551355 RIMS1Q86UR5 1692 aaKnown RBP14.8□□□□□ -0.04
NEK3-203ENST00000551355 ZFYVE9O95405 1425 aa14.79□□□□□ -0.04
NEK3-203ENST00000551355 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.79□□□□□ -0.04
NEK3-203ENST00000551355 KDM5AP29375 1690 aaKnown RBP14.78□□□□□ -0.04
NEK3-203ENST00000551355 A2ML1A8K2U0 1454 aa14.78□□□□□ -0.04
NEK3-203ENST00000551355 PRAG1Q86YV5 1406 aa14.78□□□□□ -0.04
NEK3-203ENST00000551355 TMEM131LA2VDJ0 1609 aa14.77□□□□□ -0.04
NEK3-203ENST00000551355 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms