RNA–Protein interactions for RNA: ENST00000551280.1

LINC02258-201, Transcript of long intergenic non-protein coding RNA 2258, humanhuman

TSL 2 BASIC

Gene LINC02258, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02258-201ENST00000551280 KCNH8Q96L42 1107 aa11.56□□□□□ -0.56
LINC02258-201ENST00000551280 PTPREP23469 700 aa11.55□□□□□ -0.56
LINC02258-201ENST00000551280 DMRTA1Q5VZB9 504 aa11.55□□□□□ -0.56
LINC02258-201ENST00000551280 KCNK17Q96T54 332 aa11.55□□□□□ -0.56
LINC02258-201ENST00000551280 TK2O00142 265 aa11.54□□□□□ -0.56
LINC02258-201ENST00000551280 DDX12PQ92771 950 aa11.54□□□□□ -0.56
LINC02258-201ENST00000551280 TULP1O00294 542 aaPredicted RBP11.51□□□□□ -0.57
LINC02258-201ENST00000551280 ADGRD1Q6QNK2 874 aa11.51□□□□□ -0.57
LINC02258-201ENST00000551280 SLC4A5Q9BY07 1137 aa11.51□□□□□ -0.57
LINC02258-201ENST00000551280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC02258-201ENST00000551280 TESPA1A2RU30 521 aaPredicted RBP11.48□□□□□ -0.57
LINC02258-201ENST00000551280 HRO43593 1189 aa11.47□□□□□ -0.57
LINC02258-201ENST00000551280 EN1Q05925 392 aaPredicted RBP11.47□□□□□ -0.57
LINC02258-201ENST00000551280 C6orf132Q5T0Z8 1188 aa11.47□□□□□ -0.57
LINC02258-201ENST00000551280 ZBED2Q9BTP6 218 aa11.47□□□□□ -0.57
LINC02258-201ENST00000551280 PPP1R3GB7ZBB8 358 aa11.46□□□□□ -0.57
LINC02258-201ENST00000551280 MYT1LQ9UL68 1186 aa11.46□□□□□ -0.57
LINC02258-201ENST00000551280 GRXCR2A6NFK2 248 aa11.45□□□□□ -0.58
LINC02258-201ENST00000551280 LMOD2Q6P5Q4 547 aa11.45□□□□□ -0.58
LINC02258-201ENST00000551280 VPS9D1Q9Y2B5 631 aa11.45□□□□□ -0.58
LINC02258-201ENST00000551280 SEMA3EO15041 775 aa11.44□□□□□ -0.58
LINC02258-201ENST00000551280 RBM33Q96EV2 1170 aaKnown RBP11.44□□□□□ -0.58
LINC02258-201ENST00000551280 COL9A1P20849 921 aa11.43□□□□□ -0.58
LINC02258-201ENST00000551280 OSBPP22059 807 aa11.43□□□□□ -0.58
LINC02258-201ENST00000551280 SMYD5Q6GMV2 418 aa11.43□□□□□ -0.58
LINC02258-201ENST00000551280 MAP3K7O43318 606 aa11.41□□□□□ -0.58
LINC02258-201ENST00000551280 RNF166Q96A37 237 aaPredicted RBP11.41□□□□□ -0.58
LINC02258-201ENST00000551280 BHMG1C9JSJ3 638 aaPredicted RBP11.4□□□□□ -0.58
LINC02258-201ENST00000551280 PRIM1P49642 420 aaKnown RBP11.4□□□□□ -0.58
LINC02258-201ENST00000551280 MLLT3P42568 568 aaPredicted RBP11.39□□□□□ -0.59
LINC02258-201ENST00000551280 TSR1Q2NL82 804 aaKnown RBP11.38□□□□□ -0.59
LINC02258-201ENST00000551280 ONECUT3O60422 494 aaPredicted RBP11.37□□□□□ -0.59
LINC02258-201ENST00000551280 PROX2Q3B8N5 592 aa11.36□□□□□ -0.59
LINC02258-201ENST00000551280 CERKQ8TCT0 537 aa11.35□□□□□ -0.59
LINC02258-201ENST00000551280 STAC3Q96MF2 364 aa11.35□□□□□ -0.59
LINC02258-201ENST00000551280 RABGEF1Q9UJ41 708 aa11.35□□□□□ -0.59
LINC02258-201ENST00000551280 TRIM6-TRIM34B2RNG4 842 aa11.32□□□□□ -0.6
LINC02258-201ENST00000551280 NBPF3Q9H094 633 aa11.32□□□□□ -0.6
LINC02258-201ENST00000551280 MRPL50Q8N5N7 158 aaKnown RBP11.3□□□□□ -0.6
LINC02258-201ENST00000551280 CDHR5Q9HBB8 845 aa11.3□□□□□ -0.6
LINC02258-201ENST00000551280 KIAA1468Q9P260 1216 aa11.29□□□□□ -0.6
LINC02258-201ENST00000551280 PRSS12P56730 875 aa11.28□□□□□ -0.6
LINC02258-201ENST00000551280 ZC3H15Q8WU90 426 aaKnown RBP11.28□□□□□ -0.6
LINC02258-201ENST00000551280 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
LINC02258-201ENST00000551280 NPDC1Q9NQX5 325 aaPredicted RBP11.28□□□□□ -0.6
LINC02258-201ENST00000551280 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
LINC02258-201ENST00000551280 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
LINC02258-201ENST00000551280 TSKSQ9UJT2 592 aa11.27□□□□□ -0.61
LINC02258-201ENST00000551280 PACS2Q86VP3 889 aa11.25□□□□□ -0.61
LINC02258-201ENST00000551280 KCTD12Q96CX2 325 aaKnown RBP11.25□□□□□ -0.61
LINC02258-201ENST00000551280 GOLGA8CPA6NN73 597 aa11.23□□□□□ -0.61
LINC02258-201ENST00000551280 TTC13Q8NBP0 860 aa11.22□□□□□ -0.61
LINC02258-201ENST00000551280 HCSTQ9UBK5 93 aa11.22□□□□□ -0.61
LINC02258-201ENST00000551280 FAM198AQ9UFP1 575 aa11.22□□□□□ -0.61
LINC02258-201ENST00000551280 ZMYND10O75800 440 aa11.21□□□□□ -0.61
LINC02258-201ENST00000551280 PTGDRQ13258 359 aa11.21□□□□□ -0.61
LINC02258-201ENST00000551280 FAM98CQ17RN3 349 aaKnown RBP11.2□□□□□ -0.62
LINC02258-201ENST00000551280 WNT2BQ93097 391 aa11.2□□□□□ -0.62
LINC02258-201ENST00000551280 SEPT9Q9UHD8 586 aaPredicted RBP11.2□□□□□ -0.62
LINC02258-201ENST00000551280 NUTM2FA1L443 756 aa11.19□□□□□ -0.62
LINC02258-201ENST00000551280 RBM26Q5T8P6 1007 aaKnown RBP11.19□□□□□ -0.62
LINC02258-201ENST00000551280 THSD4Q6ZMP0 1018 aa11.19□□□□□ -0.62
LINC02258-201ENST00000551280 GPIHBP1Q8IV16 184 aa11.19□□□□□ -0.62
LINC02258-201ENST00000551280 ZFRQ96KR1 1074 aaKnown RBP11.18□□□□□ -0.62
LINC02258-201ENST00000551280 NBPF26B4DH59 902 aa11.17□□□□□ -0.62
LINC02258-201ENST00000551280 PADI6Q6TGC4 694 aa11.17□□□□□ -0.62
LINC02258-201ENST00000551280 BARGINQ6ZT62 677 aa11.17□□□□□ -0.62
LINC02258-201ENST00000551280 ANKK1Q8NFD2 765 aa11.17□□□□□ -0.62
LINC02258-201ENST00000551280 TATDN2Q93075 761 aa11.17□□□□□ -0.62
LINC02258-201ENST00000551280 C3orf80F5H4A9 247 aa11.16□□□□□ -0.62
LINC02258-201ENST00000551280 FCHSD2O94868 740 aa11.15□□□□□ -0.62
LINC02258-201ENST00000551280 PNMA3Q9UL41 463 aa11.15□□□□□ -0.62
LINC02258-201ENST00000551280 SOWAHBA6NEL2 793 aa11.13□□□□□ -0.63
LINC02258-201ENST00000551280 SMAPO00193 183 aa11.13□□□□□ -0.63
LINC02258-201ENST00000551280 PTPN5P54829 565 aa11.13□□□□□ -0.63
LINC02258-201ENST00000551280 NUDT18Q6ZVK8 323 aa11.13□□□□□ -0.63
LINC02258-201ENST00000551280 HIC1Q14526 733 aa11.1□□□□□ -0.63
LINC02258-201ENST00000551280 SLC24A3Q9HC58 644 aa11.1□□□□□ -0.63
LINC02258-201ENST00000551280 GPR37O15354 613 aa11.09□□□□□ -0.63
LINC02258-201ENST00000551280 BCAMP50895 628 aa11.09□□□□□ -0.63
LINC02258-201ENST00000551280 EYA1Q99502 592 aa11.09□□□□□ -0.63
LINC02258-201ENST00000551280 LRCH3Q96II8 777 aa11.08□□□□□ -0.64
LINC02258-201ENST00000551280 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.08□□□□□ -0.64
LINC02258-201ENST00000551280 SAMD7Q7Z3H4 446 aa11.06□□□□□ -0.64
LINC02258-201ENST00000551280 ADGRG1Q9Y653 693 aa11.06□□□□□ -0.64
LINC02258-201ENST00000551280 GNPATO15228 680 aa11.05□□□□□ -0.64
LINC02258-201ENST00000551280 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
LINC02258-201ENST00000551280 AK7Q96M32 723 aa11.05□□□□□ -0.64
LINC02258-201ENST00000551280 TSR3Q9UJK0 312 aaKnown RBP11.05□□□□□ -0.64
LINC02258-201ENST00000551280 HDGFP51858 240 aaKnown RBP11.04□□□□□ -0.64
LINC02258-201ENST00000551280 BRPF1P55201 1214 aaPredicted RBP11.04□□□□□ -0.64
LINC02258-201ENST00000551280 RBM46Q8TBY0 533 aaKnown RBP11.04□□□□□ -0.64
LINC02258-201ENST00000551280 TMEM132AQ24JP5 1023 aa11.02□□□□□ -0.65
LINC02258-201ENST00000551280 KRI1Q8N9T8 703 aaKnown RBP11.02□□□□□ -0.65
LINC02258-201ENST00000551280 WBP1LQ9NX94 342 aa11.02□□□□□ -0.65
LINC02258-201ENST00000551280 HPS5Q9UPZ3 1129 aa11.02□□□□□ -0.65
LINC02258-201ENST00000551280 FECHP22830 423 aa11.01□□□□□ -0.65
LINC02258-201ENST00000551280 OATP04181 439 aa11□□□□□ -0.65
LINC02258-201ENST00000551280 DNAJB2P25686 324 aa11□□□□□ -0.65
LINC02258-201ENST00000551280 PLA2G2EQ9NZK7 142 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms