RNA–Protein interactions for RNA: ENST00000550798.1

PPFIA2-221, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-221ENST00000550798 LTBP4Q8N2S1 1624 aa18.46■□□□□ 0.55
PPFIA2-221ENST00000550798 PKD2Q13563 968 aa18.46■□□□□ 0.55
PPFIA2-221ENST00000550798 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.55
PPFIA2-221ENST00000550798 MAST1Q9Y2H9 1570 aa18.46■□□□□ 0.55
PPFIA2-221ENST00000550798 NCKAP5LQ9HCH0 1330 aa18.46■□□□□ 0.55
PPFIA2-221ENST00000550798 MIA2Q96PC5 1412 aa18.45■□□□□ 0.54
PPFIA2-221ENST00000550798 WASHC2CQ9Y4E1 1318 aa18.45■□□□□ 0.54
PPFIA2-221ENST00000550798 A2ML1A8K2U0 1454 aa18.45■□□□□ 0.54
PPFIA2-221ENST00000550798 MYOM3Q5VTT5 1437 aa18.44■□□□□ 0.54
PPFIA2-221ENST00000550798 PZPP20742 1482 aa18.44■□□□□ 0.54
PPFIA2-221ENST00000550798 DNMT1P26358 1616 aaKnown RBP18.43■□□□□ 0.54
PPFIA2-221ENST00000550798 TCOF1Q13428 1488 aaKnown RBP18.43■□□□□ 0.54
PPFIA2-221ENST00000550798 IQSEC2Q5JU85 1478 aa18.43■□□□□ 0.54
PPFIA2-221ENST00000550798 APLP2Q06481 763 aa18.42■□□□□ 0.54
PPFIA2-221ENST00000550798 TNRQ92752 1358 aa18.42■□□□□ 0.54
PPFIA2-221ENST00000550798 EIF2AK4Q9P2K8 1649 aaKnown RBP18.41■□□□□ 0.54
PPFIA2-221ENST00000550798 FBXO31Q5XUX0 539 aaPredicted RBP18.4■□□□□ 0.54
PPFIA2-221ENST00000550798 RNF17Q9BXT8 1623 aaKnown RBP18.4■□□□□ 0.54
PPFIA2-221ENST00000550798 ZC3H13Q5T200 1668 aaKnown RBP18.39■□□□□ 0.53
PPFIA2-221ENST00000550798 POLR1AO95602 1720 aaPredicted RBP18.38■□□□□ 0.53
PPFIA2-221ENST00000550798 ZNF335Q9H4Z2 1342 aaPredicted RBP18.36■□□□□ 0.53
PPFIA2-221ENST00000550798 NLRP1Q9C000 1473 aa18.35■□□□□ 0.53
PPFIA2-221ENST00000550798 ABCC3O15438 1527 aa18.34■□□□□ 0.53
PPFIA2-221ENST00000550798 DUOX2Q9NRD8 1548 aa18.34■□□□□ 0.53
PPFIA2-221ENST00000550798 CROCC2H7BZ55 1655 aa18.34■□□□□ 0.53
PPFIA2-221ENST00000550798 PTPN23Q9H3S7 1636 aa18.34■□□□□ 0.53
PPFIA2-221ENST00000550798 THEMISQ8N1K5 641 aaPredicted RBP18.32■□□□□ 0.52
PPFIA2-221ENST00000550798 UGGT1Q9NYU2 1555 aa18.32■□□□□ 0.52
PPFIA2-221ENST00000550798 SHANK2Q9UPX8 1470 aa18.32■□□□□ 0.52
PPFIA2-221ENST00000550798 MROH1Q8NDA8 1641 aa18.31■□□□□ 0.52
PPFIA2-221ENST00000550798 CEP152O94986 1710 aa18.31■□□□□ 0.52
PPFIA2-221ENST00000550798 SPATA31D1Q6ZQQ2 1576 aa18.3■□□□□ 0.52
PPFIA2-221ENST00000550798 NEURL4Q96JN8 1562 aa18.3■□□□□ 0.52
PPFIA2-221ENST00000550798 ANKLE2Q86XL3 938 aa18.3■□□□□ 0.52
PPFIA2-221ENST00000550798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.52
PPFIA2-221ENST00000550798 ABCC5O15440 1437 aa18.29■□□□□ 0.52
PPFIA2-221ENST00000550798 CFAP65Q6ZU64 1925 aaKnown RBP18.29■□□□□ 0.52
PPFIA2-221ENST00000550798 KIF15Q9NS87 1388 aa18.29■□□□□ 0.52
PPFIA2-221ENST00000550798 ERBINQ96RT1 1412 aa18.28■□□□□ 0.52
PPFIA2-221ENST00000550798 ERVK-7P63135 1459 aa18.27■□□□□ 0.52
PPFIA2-221ENST00000550798 DAPK1P53355 1430 aa18.27■□□□□ 0.52
PPFIA2-221ENST00000550798 FGD6Q6ZV73 1430 aa18.27■□□□□ 0.52
PPFIA2-221ENST00000550798 DEPDC5O75140 1603 aa18.27■□□□□ 0.51
PPFIA2-221ENST00000550798 PRDM15P57071 1507 aaPredicted RBP18.25■□□□□ 0.51
PPFIA2-221ENST00000550798 UBAP1LF5GYI3 381 aa18.25■□□□□ 0.51
PPFIA2-221ENST00000550798 RRP7BPQ9NSQ0 103 aa18.25■□□□□ 0.51
PPFIA2-221ENST00000550798 CPS1P31327 1500 aa18.24■□□□□ 0.51
PPFIA2-221ENST00000550798 MED14O60244 1454 aa18.24■□□□□ 0.51
PPFIA2-221ENST00000550798 NPHP4O75161 1426 aaPredicted RBP18.23■□□□□ 0.51
PPFIA2-221ENST00000550798 IQGAP1P46940 1657 aa18.22■□□□□ 0.51
PPFIA2-221ENST00000550798 DISP3Q9P2K9 1392 aa18.22■□□□□ 0.51
PPFIA2-221ENST00000550798 ARHGAP31Q2M1Z3 1444 aa18.22■□□□□ 0.51
PPFIA2-221ENST00000550798 UBR1Q8IWV7 1749 aa18.21■□□□□ 0.51
PPFIA2-221ENST00000550798 ANKRD30AQ9BXX3 1397 aa18.21■□□□□ 0.51
PPFIA2-221ENST00000550798 KANK1Q14678 1352 aa18.2■□□□□ 0.5
PPFIA2-221ENST00000550798 VWDEQ8N2E2 1590 aa18.19■□□□□ 0.5
PPFIA2-221ENST00000550798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.5
PPFIA2-221ENST00000550798 CHIC2Q9UKJ5 165 aa18.19■□□□□ 0.5
PPFIA2-221ENST00000550798 TOM1O60784 492 aa18.16■□□□□ 0.5
PPFIA2-221ENST00000550798 LMTK2Q8IWU2 1503 aa18.14■□□□□ 0.49
PPFIA2-221ENST00000550798 FAM50AQ14320 339 aaKnown RBP18.14■□□□□ 0.49
PPFIA2-221ENST00000550798 ADGRL2O95490 1459 aa18.14■□□□□ 0.49
PPFIA2-221ENST00000550798 SCAF11Q99590 1463 aaKnown RBP18.14■□□□□ 0.49
PPFIA2-221ENST00000550798 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
PPFIA2-221ENST00000550798 SLIT1O75093 1534 aa18.13■□□□□ 0.49
PPFIA2-221ENST00000550798 PIK3C2BO00750 1634 aa18.12■□□□□ 0.49
PPFIA2-221ENST00000550798 ARHGAP23Q9P227 1491 aa18.12■□□□□ 0.49
PPFIA2-221ENST00000550798 STAG3Q9UJ98 1225 aa18.11■□□□□ 0.49
PPFIA2-221ENST00000550798 STRCP1A6NGW2 1772 aa18.11■□□□□ 0.49
PPFIA2-221ENST00000550798 KDM5AP29375 1690 aaKnown RBP18.1■□□□□ 0.49
PPFIA2-221ENST00000550798 SYNMO15061 1565 aa18.1■□□□□ 0.49
PPFIA2-221ENST00000550798 PIP4K2BP78356 416 aa18.1■□□□□ 0.49
PPFIA2-221ENST00000550798 TXNDC2Q86VQ3 553 aa18.1■□□□□ 0.49
PPFIA2-221ENST00000550798 EID1Q9Y6B2 187 aa18.1■□□□□ 0.49
PPFIA2-221ENST00000550798 EFCAB6Q5THR3 1501 aa18.08■□□□□ 0.49
PPFIA2-221ENST00000550798 LTKP29376 864 aa18.08■□□□□ 0.48
PPFIA2-221ENST00000550798 ILDR2Q71H61 639 aa18.07■□□□□ 0.48
PPFIA2-221ENST00000550798 LRRC7Q96NW7 1537 aa18.07■□□□□ 0.48
PPFIA2-221ENST00000550798 ANKRD50Q9ULJ7 1429 aa18.06■□□□□ 0.48
PPFIA2-221ENST00000550798 TMEM2Q9UHN6 1383 aa18.05■□□□□ 0.48
PPFIA2-221ENST00000550798 IDI1Q13907 227 aa18.05■□□□□ 0.48
PPFIA2-221ENST00000550798 HSPA1LP34931 641 aa18.04■□□□□ 0.48
PPFIA2-221ENST00000550798 NOS1P29475 1434 aa18.04■□□□□ 0.48
PPFIA2-221ENST00000550798 RPRD2Q5VT52 1461 aaKnown RBP18.03■□□□□ 0.48
PPFIA2-221ENST00000550798 ALKQ9UM73 1620 aa18.02■□□□□ 0.48
PPFIA2-221ENST00000550798 SLC52A1Q9NWF4 448 aa18.02■□□□□ 0.48
PPFIA2-221ENST00000550798 TET3O43151 1660 aa18.02■□□□□ 0.47
PPFIA2-221ENST00000550798 ADGRB3O60242 1522 aa18.02■□□□□ 0.47
PPFIA2-221ENST00000550798 GCC2Q8IWJ2 1684 aa18■□□□□ 0.47
PPFIA2-221ENST00000550798 SOCS7O14512 581 aa18■□□□□ 0.47
PPFIA2-221ENST00000550798 UNC13BO14795 1591 aa18■□□□□ 0.47
PPFIA2-221ENST00000550798 XIRP1Q702N8 1843 aaKnown RBP17.98■□□□□ 0.47
PPFIA2-221ENST00000550798 ROCK1Q13464 1354 aa17.97■□□□□ 0.47
PPFIA2-221ENST00000550798 MYO5BQ9ULV0 1848 aa17.95■□□□□ 0.46
PPFIA2-221ENST00000550798 MED1Q15648 1581 aaPredicted RBP17.95■□□□□ 0.46
PPFIA2-221ENST00000550798 KCNA6P17658 529 aa17.93■□□□□ 0.46
PPFIA2-221ENST00000550798 HDGFP51858 240 aaKnown RBP17.93■□□□□ 0.46
PPFIA2-221ENST00000550798 BCANQ96GW7 911 aa17.93■□□□□ 0.46
PPFIA2-221ENST00000550798 SLC26A8Q96RN1 970 aa17.93■□□□□ 0.46
PPFIA2-221ENST00000550798 IQGAP3Q86VI3 1631 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms