RNA–Protein interactions for RNA: ENST00000550723.1

LINC02444-201, Transcript of long intergenic non-protein coding RNA 2444, humanhuman

TSL 1 (best) BASIC

Gene LINC02444, Length 1,256 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02444-201ENST00000550723 PCDHGA10Q9Y5H3 936 aa11.98□□□□□ -0.49
LINC02444-201ENST00000550723 LARP6Q9BRS8 491 aaKnown RBP11.96□□□□□ -0.49
LINC02444-201ENST00000550723 ZFRQ96KR1 1074 aaKnown RBP11.95□□□□□ -0.5
LINC02444-201ENST00000550723 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
LINC02444-201ENST00000550723 KIAA1468Q9P260 1216 aa11.95□□□□□ -0.5
LINC02444-201ENST00000550723 DDX27Q96GQ7 796 aaKnown RBP11.94□□□□□ -0.5
LINC02444-201ENST00000550723 LAPTM4AQ15012 233 aa11.92□□□□□ -0.5
LINC02444-201ENST00000550723 TYW1BQ6NUM6 668 aa11.91□□□□□ -0.5
LINC02444-201ENST00000550723 FBXW7Q969H0 707 aa11.91□□□□□ -0.5
LINC02444-201ENST00000550723 ONECUT3O60422 494 aaPredicted RBP11.9□□□□□ -0.5
LINC02444-201ENST00000550723 PHF14O94880 888 aa11.9□□□□□ -0.5
LINC02444-201ENST00000550723 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
LINC02444-201ENST00000550723 SEPT9Q9UHD8 586 aaPredicted RBP11.88□□□□□ -0.51
LINC02444-201ENST00000550723 MFSD10Q14728 455 aa11.87□□□□□ -0.51
LINC02444-201ENST00000550723 TRAF7Q6Q0C0 670 aa11.87□□□□□ -0.51
LINC02444-201ENST00000550723 GFRA3O60609 400 aa11.86□□□□□ -0.51
LINC02444-201ENST00000550723 LCE2BO14633 110 aa11.85□□□□□ -0.51
LINC02444-201ENST00000550723 C6orf132Q5T0Z8 1188 aa11.84□□□□□ -0.51
LINC02444-201ENST00000550723 TSR3Q9UJK0 312 aaKnown RBP11.84□□□□□ -0.51
LINC02444-201ENST00000550723 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.83□□□□□ -0.52
LINC02444-201ENST00000550723 FAM98CQ17RN3 349 aaKnown RBP11.82□□□□□ -0.52
LINC02444-201ENST00000550723 HPS5Q9UPZ3 1129 aa11.82□□□□□ -0.52
LINC02444-201ENST00000550723 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
LINC02444-201ENST00000550723 GTPBP6O43824 516 aaPredicted RBP11.8□□□□□ -0.52
LINC02444-201ENST00000550723 LRCH3Q96II8 777 aa11.8□□□□□ -0.52
LINC02444-201ENST00000550723 EPAS1Q99814 870 aa11.8□□□□□ -0.52
LINC02444-201ENST00000550723 PRKD2Q9BZL6 878 aa11.74□□□□□ -0.53
LINC02444-201ENST00000550723 NRG2O14511 850 aaPredicted RBP11.73□□□□□ -0.53
LINC02444-201ENST00000550723 PPP4CP60510 307 aa11.73□□□□□ -0.53
LINC02444-201ENST00000550723 RBM33Q96EV2 1170 aaKnown RBP11.73□□□□□ -0.53
LINC02444-201ENST00000550723 TJAP1Q5JTD0 557 aa11.71□□□□□ -0.53
LINC02444-201ENST00000550723 PACS2Q86VP3 889 aa11.69□□□□□ -0.54
LINC02444-201ENST00000550723 PPP1R18Q6NYC8 613 aa11.67□□□□□ -0.54
LINC02444-201ENST00000550723 TSKSQ9UJT2 592 aa11.67□□□□□ -0.54
LINC02444-201ENST00000550723 DPYSL4O14531 572 aa11.66□□□□□ -0.54
LINC02444-201ENST00000550723 CAMK2BQ13554 666 aa11.66□□□□□ -0.54
LINC02444-201ENST00000550723 CADPS2Q86UW7 1296 aa11.66□□□□□ -0.54
LINC02444-201ENST00000550723 DDX12PQ92771 950 aa11.66□□□□□ -0.54
LINC02444-201ENST00000550723 V9GY48 417 aaPredicted RBP11.66□□□□□ -0.54
LINC02444-201ENST00000550723 ZNF787Q6DD87 383 aa11.65□□□□□ -0.54
LINC02444-201ENST00000550723 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
LINC02444-201ENST00000550723 MTRQ99707 1265 aa11.63□□□□□ -0.55
LINC02444-201ENST00000550723 SAMD7Q7Z3H4 446 aa11.62□□□□□ -0.55
LINC02444-201ENST00000550723 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.61□□□□□ -0.55
LINC02444-201ENST00000550723 TSR1Q2NL82 804 aaKnown RBP11.6□□□□□ -0.55
LINC02444-201ENST00000550723 SMAPO00193 183 aa11.59□□□□□ -0.55
LINC02444-201ENST00000550723 MAP3K7O43318 606 aa11.59□□□□□ -0.55
LINC02444-201ENST00000550723 EN1Q05925 392 aaPredicted RBP11.59□□□□□ -0.55
LINC02444-201ENST00000550723 NBR1Q14596 966 aa11.58□□□□□ -0.56
LINC02444-201ENST00000550723 ZNF516Q92618 1163 aa11.58□□□□□ -0.56
LINC02444-201ENST00000550723 PDZRN3Q9UPQ7 1066 aa11.58□□□□□ -0.56
LINC02444-201ENST00000550723 CDCA7LQ96GN5 454 aa11.57□□□□□ -0.56
LINC02444-201ENST00000550723 ZNF775Q96BV0 537 aaPredicted RBP11.55□□□□□ -0.56
LINC02444-201ENST00000550723 PRSS12P56730 875 aa11.54□□□□□ -0.56
LINC02444-201ENST00000550723 FAM198AQ9UFP1 575 aa11.54□□□□□ -0.56
LINC02444-201ENST00000550723 TATDN2Q93075 761 aa11.52□□□□□ -0.57
LINC02444-201ENST00000550723 C3orf80F5H4A9 247 aa11.51□□□□□ -0.57
LINC02444-201ENST00000550723 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
LINC02444-201ENST00000550723 PNMA3Q9UL41 463 aa11.51□□□□□ -0.57
LINC02444-201ENST00000550723 HDGFP51858 240 aaKnown RBP11.5□□□□□ -0.57
LINC02444-201ENST00000550723 APLP1P51693 650 aa11.49□□□□□ -0.57
LINC02444-201ENST00000550723 CERKQ8TCT0 537 aa11.49□□□□□ -0.57
LINC02444-201ENST00000550723 NBPF26B4DH59 902 aa11.48□□□□□ -0.57
LINC02444-201ENST00000550723 RNF40O75150 1001 aa11.48□□□□□ -0.57
LINC02444-201ENST00000550723 GGCXP38435 758 aa11.48□□□□□ -0.57
LINC02444-201ENST00000550723 PDIA6Q15084 440 aa11.46□□□□□ -0.57
LINC02444-201ENST00000550723 SPDYE16A6NNV3 312 aaPredicted RBP11.44□□□□□ -0.58
LINC02444-201ENST00000550723 NUDT18Q6ZVK8 323 aa11.44□□□□□ -0.58
LINC02444-201ENST00000550723 TMUB1Q9BVT8 246 aa11.44□□□□□ -0.58
LINC02444-201ENST00000550723 COPS2P61201 443 aa11.43□□□□□ -0.58
LINC02444-201ENST00000550723 DCAF8L2P0C7V8 631 aa11.41□□□□□ -0.58
LINC02444-201ENST00000550723 PRIM1P49642 420 aaKnown RBP11.41□□□□□ -0.58
LINC02444-201ENST00000550723 NECTIN2Q92692 538 aa11.41□□□□□ -0.58
LINC02444-201ENST00000550723 TRIM67Q6ZTA4 783 aa11.38□□□□□ -0.59
LINC02444-201ENST00000550723 GRXCR2A6NFK2 248 aa11.37□□□□□ -0.59
LINC02444-201ENST00000550723 ZPR1O75312 459 aa11.37□□□□□ -0.59
LINC02444-201ENST00000550723 PKDCCQ504Y2 493 aa11.37□□□□□ -0.59
LINC02444-201ENST00000550723 SLC19A1P41440 591 aa11.36□□□□□ -0.59
LINC02444-201ENST00000550723 MYT1Q01538 1121 aa11.36□□□□□ -0.59
LINC02444-201ENST00000550723 SWT1Q5T5J6 900 aaKnown RBP11.36□□□□□ -0.59
LINC02444-201ENST00000550723 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
LINC02444-201ENST00000550723 RBM27Q9P2N5 1060 aaKnown RBP11.35□□□□□ -0.59
LINC02444-201ENST00000550723 DGAT1O75907 488 aa11.34□□□□□ -0.59
LINC02444-201ENST00000550723 CDHR5Q9HBB8 845 aa11.34□□□□□ -0.59
LINC02444-201ENST00000550723 POTECB2RU33 542 aa11.33□□□□□ -0.6
LINC02444-201ENST00000550723 RNF223E7ERA6 249 aa11.32□□□□□ -0.6
LINC02444-201ENST00000550723 OSBPP22059 807 aa11.31□□□□□ -0.6
LINC02444-201ENST00000550723 SPRYD7Q5W111 196 aa11.31□□□□□ -0.6
LINC02444-201ENST00000550723 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
LINC02444-201ENST00000550723 ZNF598Q86UK7 904 aaKnown RBP11.3□□□□□ -0.6
LINC02444-201ENST00000550723 SLC4A3P48751 1232 aa11.29□□□□□ -0.6
LINC02444-201ENST00000550723 TTC13Q8NBP0 860 aa11.29□□□□□ -0.6
LINC02444-201ENST00000550723 PCDHB3Q9Y5E6 796 aa11.29□□□□□ -0.6
LINC02444-201ENST00000550723 PRR20EP86478 221 aa11.28□□□□□ -0.6
LINC02444-201ENST00000550723 PRR20CP86479 221 aa11.28□□□□□ -0.6
LINC02444-201ENST00000550723 PRR20DP86480 221 aa11.28□□□□□ -0.6
LINC02444-201ENST00000550723 PRR20BP86481 221 aa11.28□□□□□ -0.6
LINC02444-201ENST00000550723 PRR20AP86496 221 aa11.28□□□□□ -0.6
LINC02444-201ENST00000550723 PRR14Q9BWN1 585 aa11.27□□□□□ -0.61
LINC02444-201ENST00000550723 E2F4Q16254 413 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms