RNA–Protein interactions for RNA: ENST00000550559.5

TSFM-210, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 5 BASIC

Gene TSFM, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-210ENST00000550559 KDM5DQ9BY66 1539 aa25.46■■□□□ 1.67
TSFM-210ENST00000550559 DUOX2Q9NRD8 1548 aa25.46■■□□□ 1.67
TSFM-210ENST00000550559 KIF15Q9NS87 1388 aa25.44■■□□□ 1.66
TSFM-210ENST00000550559 RNF17Q9BXT8 1623 aaKnown RBP25.42■■□□□ 1.66
TSFM-210ENST00000550559 WASHC2CQ9Y4E1 1318 aa25.4■■□□□ 1.66
TSFM-210ENST00000550559 FAM50AQ14320 339 aaKnown RBP25.4■■□□□ 1.66
TSFM-210ENST00000550559 ANKRD30AQ9BXX3 1397 aa25.4■■□□□ 1.66
TSFM-210ENST00000550559 PTPRKQ15262 1439 aa25.39■■□□□ 1.66
TSFM-210ENST00000550559 ERBINQ96RT1 1412 aa25.39■■□□□ 1.66
TSFM-210ENST00000550559 RRP7BPQ9NSQ0 103 aa25.36■■□□□ 1.65
TSFM-210ENST00000550559 ZC3H13Q5T200 1668 aaKnown RBP25.36■■□□□ 1.65
TSFM-210ENST00000550559 PZPP20742 1482 aa25.34■■□□□ 1.65
TSFM-210ENST00000550559 ADGRL2O95490 1459 aa25.34■■□□□ 1.65
TSFM-210ENST00000550559 CHIC2Q9UKJ5 165 aa25.33■■□□□ 1.65
TSFM-210ENST00000550559 MYO3AQ8NEV4 1616 aa25.32■■□□□ 1.64
TSFM-210ENST00000550559 NCOA1Q15788 1441 aa25.31■■□□□ 1.64
TSFM-210ENST00000550559 ABCC3O15438 1527 aa25.31■■□□□ 1.64
TSFM-210ENST00000550559 MROH1Q8NDA8 1641 aa25.3■■□□□ 1.64
TSFM-210ENST00000550559 ZNF142P52746 1687 aaPredicted RBP25.3■■□□□ 1.64
TSFM-210ENST00000550559 PRDM15P57071 1507 aaPredicted RBP25.29■■□□□ 1.64
TSFM-210ENST00000550559 DMRT2Q9Y5R5 561 aa25.29■■□□□ 1.64
TSFM-210ENST00000550559 TNRQ92752 1358 aa25.28■■□□□ 1.64
TSFM-210ENST00000550559 CEP170BQ9Y4F5 1589 aaPredicted RBP25.27■■□□□ 1.64
TSFM-210ENST00000550559 PPARGC1BQ86YN6 1023 aaKnown RBP25.25■■□□□ 1.63
TSFM-210ENST00000550559 KANK1Q14678 1352 aa25.25■■□□□ 1.63
TSFM-210ENST00000550559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.25■■□□□ 1.63
TSFM-210ENST00000550559 DEPDC5O75140 1603 aa25.24■■□□□ 1.63
TSFM-210ENST00000550559 A2ML1A8K2U0 1454 aa25.24■■□□□ 1.63
TSFM-210ENST00000550559 STRCQ7RTU9 1775 aa25.23■■□□□ 1.63
TSFM-210ENST00000550559 FBXO31Q5XUX0 539 aaPredicted RBP25.23■■□□□ 1.63
TSFM-210ENST00000550559 CEP152O94986 1710 aa25.23■■□□□ 1.63
TSFM-210ENST00000550559 CAMSAP1Q5T5Y3 1602 aa25.23■■□□□ 1.63
TSFM-210ENST00000550559 PLA2R1Q13018 1463 aa25.21■■□□□ 1.63
TSFM-210ENST00000550559 NLRP1Q9C000 1473 aa25.2■■□□□ 1.62
TSFM-210ENST00000550559 ANKRD50Q9ULJ7 1429 aa25.2■■□□□ 1.62
TSFM-210ENST00000550559 PTPRTO14522 1441 aa25.19■■□□□ 1.62
TSFM-210ENST00000550559 ROCK1Q13464 1354 aa25.18■■□□□ 1.62
TSFM-210ENST00000550559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.18■■□□□ 1.62
TSFM-210ENST00000550559 ARHGAP31Q2M1Z3 1444 aa25.18■■□□□ 1.62
TSFM-210ENST00000550559 SPATA31D1Q6ZQQ2 1576 aa25.18■■□□□ 1.62
TSFM-210ENST00000550559 ERVK-7P63135 1459 aa25.17■■□□□ 1.62
TSFM-210ENST00000550559 LMTK2Q8IWU2 1503 aa25.14■■□□□ 1.62
TSFM-210ENST00000550559 VWDEQ8N2E2 1590 aa25.14■■□□□ 1.61
TSFM-210ENST00000550559 RRBP1Q9P2E9 1410 aaKnown RBP25.13■■□□□ 1.61
TSFM-210ENST00000550559 PKD2Q13563 968 aa25.13■■□□□ 1.61
TSFM-210ENST00000550559 ITGAEP38570 1179 aa25.1■■□□□ 1.61
TSFM-210ENST00000550559 UGGT1Q9NYU2 1555 aa25.1■■□□□ 1.61
TSFM-210ENST00000550559 THEMISQ8N1K5 641 aaPredicted RBP25.08■■□□□ 1.61
TSFM-210ENST00000550559 NCKAP5LQ9HCH0 1330 aa25.07■■□□□ 1.6
TSFM-210ENST00000550559 CFAP65Q6ZU64 1925 aaKnown RBP25.06■■□□□ 1.6
TSFM-210ENST00000550559 EFCAB6Q5THR3 1501 aa25.06■■□□□ 1.6
TSFM-210ENST00000550559 UNC13BO14795 1591 aa25.05■■□□□ 1.6
TSFM-210ENST00000550559 ILDR1Q86SU0 546 aaPredicted RBP25.04■■□□□ 1.6
TSFM-210ENST00000550559 POLR1AO95602 1720 aaPredicted RBP25.02■■□□□ 1.6
TSFM-210ENST00000550559 CERKQ8TCT0 537 aa25.01■■□□□ 1.59
TSFM-210ENST00000550559 FBXO41Q8TF61 875 aa25.01■■□□□ 1.59
TSFM-210ENST00000550559 RPRD2Q5VT52 1461 aaKnown RBP25.01■■□□□ 1.59
TSFM-210ENST00000550559 ANKLE2Q86XL3 938 aa25■■□□□ 1.59
TSFM-210ENST00000550559 TET3O43151 1660 aa25■■□□□ 1.59
TSFM-210ENST00000550559 NOS1P29475 1434 aa24.96■■□□□ 1.59
TSFM-210ENST00000550559 UBR1Q8IWV7 1749 aa24.96■■□□□ 1.59
TSFM-210ENST00000550559 GCC2Q8IWJ2 1684 aa24.96■■□□□ 1.59
TSFM-210ENST00000550559 NEURL4Q96JN8 1562 aa24.95■■□□□ 1.58
TSFM-210ENST00000550559 IQGAP3Q86VI3 1631 aa24.94■■□□□ 1.58
TSFM-210ENST00000550559 SYNMO15061 1565 aa24.93■■□□□ 1.58
TSFM-210ENST00000550559 MED14O60244 1454 aa24.92■■□□□ 1.58
TSFM-210ENST00000550559 STAG3Q9UJ98 1225 aa24.92■■□□□ 1.58
TSFM-210ENST00000550559 NUP155O75694 1391 aa24.92■■□□□ 1.58
TSFM-210ENST00000550559 PIK3C2BO00750 1634 aa24.91■■□□□ 1.58
TSFM-210ENST00000550559 LTBP4Q8N2S1 1624 aa24.91■■□□□ 1.58
TSFM-210ENST00000550559 NPHP4O75161 1426 aaPredicted RBP24.91■■□□□ 1.58
TSFM-210ENST00000550559 KDM5AP29375 1690 aaKnown RBP24.91■■□□□ 1.58
TSFM-210ENST00000550559 SLC52A1Q9NWF4 448 aa24.9■■□□□ 1.58
TSFM-210ENST00000550559 SLIT1O75093 1534 aa24.89■■□□□ 1.57
TSFM-210ENST00000550559 ARHGAP23Q9P227 1491 aa24.88■■□□□ 1.57
TSFM-210ENST00000550559 ZNF335Q9H4Z2 1342 aaPredicted RBP24.87■■□□□ 1.57
TSFM-210ENST00000550559 NAIPQ13075 1403 aa24.87■■□□□ 1.57
TSFM-210ENST00000550559 IDI1Q13907 227 aa24.87■■□□□ 1.57
TSFM-210ENST00000550559 IQSEC2Q5JU85 1478 aa24.87■■□□□ 1.57
TSFM-210ENST00000550559 SCAF11Q99590 1463 aaKnown RBP24.87■■□□□ 1.57
TSFM-210ENST00000550559 IQGAP1P46940 1657 aa24.86■■□□□ 1.57
TSFM-210ENST00000550559 HFM1A2PYH4 1435 aa24.86■■□□□ 1.57
TSFM-210ENST00000550559 EID1Q9Y6B2 187 aa24.85■■□□□ 1.57
TSFM-210ENST00000550559 ADGRB3O60242 1522 aa24.85■■□□□ 1.57
TSFM-210ENST00000550559 E9PCH4 1651 aa24.85■■□□□ 1.57
TSFM-210ENST00000550559 TMEM2Q9UHN6 1383 aa24.83■■□□□ 1.57
TSFM-210ENST00000550559 TXNDC2Q86VQ3 553 aa24.81■■□□□ 1.56
TSFM-210ENST00000550559 CPS1P31327 1500 aa24.79■■□□□ 1.56
TSFM-210ENST00000550559 LTKP29376 864 aa24.77■■□□□ 1.56
TSFM-210ENST00000550559 TRIM52Q96A61 297 aa24.72■■□□□ 1.55
TSFM-210ENST00000550559 TMEM131LA2VDJ0 1609 aa24.72■■□□□ 1.55
TSFM-210ENST00000550559 HDGFP51858 240 aaKnown RBP24.71■■□□□ 1.55
TSFM-210ENST00000550559 SPHKAPQ2M3C7 1700 aa24.71■■□□□ 1.55
TSFM-210ENST00000550559 CHGAP10645 457 aaKnown RBP24.7■■□□□ 1.54
TSFM-210ENST00000550559 RIMS2Q9UQ26 1411 aa24.68■■□□□ 1.54
TSFM-210ENST00000550559 MYO5BQ9ULV0 1848 aa24.68■■□□□ 1.54
TSFM-210ENST00000550559 ZFYVE9O95405 1425 aa24.67■■□□□ 1.54
TSFM-210ENST00000550559 PPP1R15AO75807 674 aaPredicted RBP24.66■■□□□ 1.54
TSFM-210ENST00000550559 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.66■■□□□ 1.54
TSFM-210ENST00000550559 ACIN1Q9UKV3 1341 aaKnown RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms