RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 LMTK3Q96Q04 1460 aa18.18■□□□□ 0.5
CACNB3-217ENST00000550483 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
CACNB3-217ENST00000550483 ARID4BQ4LE39 1312 aaPredicted RBP18.17■□□□□ 0.5
CACNB3-217ENST00000550483 TONSLQ96HA7 1378 aa18.17■□□□□ 0.5
CACNB3-217ENST00000550483 ILDR2Q71H61 639 aa18.16■□□□□ 0.5
CACNB3-217ENST00000550483 ANKRD30BQ9BXX2 1392 aa18.16■□□□□ 0.5
CACNB3-217ENST00000550483 DHX29Q7Z478 1369 aaKnown RBP18.15■□□□□ 0.5
CACNB3-217ENST00000550483 FAM135AQ9P2D6 1515 aa18.14■□□□□ 0.49
CACNB3-217ENST00000550483 IQGAP3Q86VI3 1631 aa18.14■□□□□ 0.49
CACNB3-217ENST00000550483 ADAMTSL3P82987 1691 aa18.14■□□□□ 0.49
CACNB3-217ENST00000550483 RPRD2Q5VT52 1461 aaKnown RBP18.12■□□□□ 0.49
CACNB3-217ENST00000550483 NEUROD1Q13562 356 aa18.11■□□□□ 0.49
CACNB3-217ENST00000550483 SIN3AQ96ST3 1273 aa18.11■□□□□ 0.49
CACNB3-217ENST00000550483 DEPDC5O75140 1603 aa18.11■□□□□ 0.49
CACNB3-217ENST00000550483 KIDINS220Q9ULH0 1771 aa18.11■□□□□ 0.49
CACNB3-217ENST00000550483 KANK1Q14678 1352 aa18.1■□□□□ 0.49
CACNB3-217ENST00000550483 CERKQ8TCT0 537 aa18.1■□□□□ 0.49
CACNB3-217ENST00000550483 MYT1LQ9UL68 1186 aa18.1■□□□□ 0.49
CACNB3-217ENST00000550483 ZMYM4Q5VZL5 1548 aa18.09■□□□□ 0.49
CACNB3-217ENST00000550483 PKD2Q13563 968 aa18.09■□□□□ 0.49
CACNB3-217ENST00000550483 A2MP01023 1474 aa18.08■□□□□ 0.49
CACNB3-217ENST00000550483 BCORL1Q5H9F3 1711 aa18.07■□□□□ 0.48
CACNB3-217ENST00000550483 RICTORQ6R327 1708 aa18.07■□□□□ 0.48
CACNB3-217ENST00000550483 PRDM15P57071 1507 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-217ENST00000550483 MADDQ8WXG6 1647 aa18.05■□□□□ 0.48
CACNB3-217ENST00000550483 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
CACNB3-217ENST00000550483 ATP10AO60312 1499 aa18.05■□□□□ 0.48
CACNB3-217ENST00000550483 VWDEQ8N2E2 1590 aa18.04■□□□□ 0.48
CACNB3-217ENST00000550483 ZNF316A6NFI3 1004 aaPredicted RBP18.04■□□□□ 0.48
CACNB3-217ENST00000550483 DISP3Q9P2K9 1392 aa18.04■□□□□ 0.48
CACNB3-217ENST00000550483 RNF17Q9BXT8 1623 aaKnown RBP18.03■□□□□ 0.48
CACNB3-217ENST00000550483 SOCS7O14512 581 aa18.02■□□□□ 0.48
CACNB3-217ENST00000550483 LMTK2Q8IWU2 1503 aa18.01■□□□□ 0.47
CACNB3-217ENST00000550483 ABCA6Q8N139 1617 aa18.01■□□□□ 0.47
CACNB3-217ENST00000550483 FRMPD1Q5SYB0 1578 aa18■□□□□ 0.47
CACNB3-217ENST00000550483 DIP2CQ9Y2E4 1556 aa18■□□□□ 0.47
CACNB3-217ENST00000550483 TET3O43151 1660 aa18■□□□□ 0.47
CACNB3-217ENST00000550483 REREQ9P2R6 1566 aa18■□□□□ 0.47
CACNB3-217ENST00000550483 KIF3BO15066 747 aa17.99■□□□□ 0.47
CACNB3-217ENST00000550483 MLECQ14165 292 aa17.98■□□□□ 0.47
CACNB3-217ENST00000550483 FOXD1Q16676 465 aa17.98■□□□□ 0.47
CACNB3-217ENST00000550483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.98■□□□□ 0.47
CACNB3-217ENST00000550483 CCDC144AA2RUR9 1427 aa17.98■□□□□ 0.47
CACNB3-217ENST00000550483 MROH1Q8NDA8 1641 aa17.97■□□□□ 0.47
CACNB3-217ENST00000550483 RIMS1Q86UR5 1692 aaKnown RBP17.96■□□□□ 0.47
CACNB3-217ENST00000550483 TRPM2O94759 1503 aa17.93■□□□□ 0.46
CACNB3-217ENST00000550483 AGLP35573 1532 aa17.93■□□□□ 0.46
CACNB3-217ENST00000550483 PTPRTO14522 1441 aa17.92■□□□□ 0.46
CACNB3-217ENST00000550483 ZC3H13Q5T200 1668 aaKnown RBP17.92■□□□□ 0.46
CACNB3-217ENST00000550483 EFCAB6Q5THR3 1501 aa17.92■□□□□ 0.46
CACNB3-217ENST00000550483 L3MBTL2Q969R5 705 aa17.91■□□□□ 0.46
CACNB3-217ENST00000550483 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
CACNB3-217ENST00000550483 NEURL4Q96JN8 1562 aa17.9■□□□□ 0.46
CACNB3-217ENST00000550483 E9PCH4 1651 aa17.9■□□□□ 0.46
CACNB3-217ENST00000550483 ARHGEF40Q8TER5 1519 aa17.89■□□□□ 0.45
CACNB3-217ENST00000550483 CEBPAP49715 358 aaPredicted RBP17.89■□□□□ 0.45
CACNB3-217ENST00000550483 STAC3Q96MF2 364 aa17.89■□□□□ 0.45
CACNB3-217ENST00000550483 YEATS2Q9ULM3 1422 aa17.89■□□□□ 0.45
CACNB3-217ENST00000550483 PLA2R1Q13018 1463 aa17.88■□□□□ 0.45
CACNB3-217ENST00000550483 UHRF1BP1Q6BDS2 1440 aa17.88■□□□□ 0.45
CACNB3-217ENST00000550483 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
CACNB3-217ENST00000550483 ABCC3O15438 1527 aa17.86■□□□□ 0.45
CACNB3-217ENST00000550483 ARHGAP31Q2M1Z3 1444 aa17.85■□□□□ 0.45
CACNB3-217ENST00000550483 SIGLEC1Q9BZZ2 1709 aa17.84■□□□□ 0.45
CACNB3-217ENST00000550483 CNTLNQ9NXG0 1405 aa17.82■□□□□ 0.44
CACNB3-217ENST00000550483 WASHC2CQ9Y4E1 1318 aa17.82■□□□□ 0.44
CACNB3-217ENST00000550483 GGT6Q6P531 493 aa17.81■□□□□ 0.44
CACNB3-217ENST00000550483 CAMSAP1Q5T5Y3 1602 aa17.8■□□□□ 0.44
CACNB3-217ENST00000550483 DIEXFQ68CQ4 756 aaKnown RBP17.8■□□□□ 0.44
CACNB3-217ENST00000550483 CEP152O94986 1710 aa17.8■□□□□ 0.44
CACNB3-217ENST00000550483 SPATA31E1Q6ZUB1 1445 aa17.79■□□□□ 0.44
CACNB3-217ENST00000550483 RALGAPBQ86X10 1494 aa17.78■□□□□ 0.44
CACNB3-217ENST00000550483 NPATQ14207 1427 aa17.78■□□□□ 0.44
CACNB3-217ENST00000550483 CLTCL1P53675 1640 aa17.76■□□□□ 0.43
CACNB3-217ENST00000550483 EIF4G2P78344 907 aaKnown RBP eCLIP17.76■□□□□ 0.43
CACNB3-217ENST00000550483 DMRT2Q9Y5R5 561 aa17.76■□□□□ 0.43
CACNB3-217ENST00000550483 NOS1P29475 1434 aa17.75■□□□□ 0.43
CACNB3-217ENST00000550483 PRAG1Q86YV5 1406 aa17.73■□□□□ 0.43
CACNB3-217ENST00000550483 NBPF8Q3BBV2 869 aa17.73■□□□□ 0.43
CACNB3-217ENST00000550483 DCAF11Q8TEB1 546 aa17.73■□□□□ 0.43
CACNB3-217ENST00000550483 STRCQ7RTU9 1775 aa17.72■□□□□ 0.43
CACNB3-217ENST00000550483 FER1L4A9Z1Z3 1794 aa17.71■□□□□ 0.43
CACNB3-217ENST00000550483 SPATA31D1Q6ZQQ2 1576 aa17.7■□□□□ 0.42
CACNB3-217ENST00000550483 MYOM2P54296 1465 aa17.7■□□□□ 0.42
CACNB3-217ENST00000550483 LAMC1P11047 1609 aa17.7■□□□□ 0.42
CACNB3-217ENST00000550483 KIF1BO60333 1816 aa17.7■□□□□ 0.42
CACNB3-217ENST00000550483 ADGRB3O60242 1522 aa17.69■□□□□ 0.42
CACNB3-217ENST00000550483 SLC52A1Q9NWF4 448 aa17.69■□□□□ 0.42
CACNB3-217ENST00000550483 GPRASP1Q5JY77 1395 aa17.68■□□□□ 0.42
CACNB3-217ENST00000550483 PIK3C2BO00750 1634 aa17.68■□□□□ 0.42
CACNB3-217ENST00000550483 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
CACNB3-217ENST00000550483 RGL3Q3MIN7 710 aa17.67■□□□□ 0.42
CACNB3-217ENST00000550483 TRPM1Q7Z4N2 1603 aa17.66■□□□□ 0.42
CACNB3-217ENST00000550483 HSPA5P11021 654 aaKnown RBP17.65■□□□□ 0.42
CACNB3-217ENST00000550483 ZNF326Q5BKZ1 582 aaKnown RBP17.65■□□□□ 0.42
CACNB3-217ENST00000550483 ESF1Q9H501 851 aaKnown RBP17.65■□□□□ 0.42
CACNB3-217ENST00000550483 KDM2AQ9Y2K7 1162 aa17.65■□□□□ 0.42
CACNB3-217ENST00000550483 ROCK2O75116 1388 aaKnown RBP17.65■□□□□ 0.42
CACNB3-217ENST00000550483 PREX1Q8TCU6 1659 aa17.64■□□□□ 0.42
CACNB3-217ENST00000550483 USP47Q96K76 1375 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms