RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 NCOA1Q15788 1441 aa31.04■■■□□ 2.56
GCN1-207ENST00000550471 EIF2AK4Q9P2K8 1649 aaKnown RBP31.02■■■□□ 2.56
GCN1-207ENST00000550471 FGD6Q6ZV73 1430 aa31.01■■■□□ 2.55
GCN1-207ENST00000550471 PTPN23Q9H3S7 1636 aa31.01■■■□□ 2.55
GCN1-207ENST00000550471 PZPP20742 1482 aa31.01■■■□□ 2.55
GCN1-207ENST00000550471 ZNF142P52746 1687 aaPredicted RBP31■■■□□ 2.55
GCN1-207ENST00000550471 DUOX2Q9NRD8 1548 aa31■■■□□ 2.55
GCN1-207ENST00000550471 CERKQ8TCT0 537 aa31■■■□□ 2.55
GCN1-207ENST00000550471 PLA2R1Q13018 1463 aa31■■■□□ 2.55
GCN1-207ENST00000550471 TCOF1Q13428 1488 aaKnown RBP31■■■□□ 2.55
GCN1-207ENST00000550471 MYO3AQ8NEV4 1616 aa30.99■■■□□ 2.55
GCN1-207ENST00000550471 PKD2Q13563 968 aa30.99■■■□□ 2.55
GCN1-207ENST00000550471 RNF17Q9BXT8 1623 aaKnown RBP30.98■■■□□ 2.55
GCN1-207ENST00000550471 CEP170BQ9Y4F5 1589 aaPredicted RBP30.97■■■□□ 2.55
GCN1-207ENST00000550471 CAMSAP1Q5T5Y3 1602 aa30.97■■■□□ 2.55
GCN1-207ENST00000550471 ABCC5O15440 1437 aa30.96■■■□□ 2.55
GCN1-207ENST00000550471 A2ML1A8K2U0 1454 aa30.95■■■□□ 2.55
GCN1-207ENST00000550471 TNRQ92752 1358 aa30.95■■■□□ 2.55
GCN1-207ENST00000550471 ZC3H13Q5T200 1668 aaKnown RBP30.93■■■□□ 2.54
GCN1-207ENST00000550471 ERBINQ96RT1 1412 aa30.93■■■□□ 2.54
GCN1-207ENST00000550471 KIF15Q9NS87 1388 aa30.92■■■□□ 2.54
GCN1-207ENST00000550471 DAPK1P53355 1430 aa30.92■■■□□ 2.54
GCN1-207ENST00000550471 DNMT1P26358 1616 aaKnown RBP30.91■■■□□ 2.54
GCN1-207ENST00000550471 CROCC2H7BZ55 1655 aa30.9■■■□□ 2.54
GCN1-207ENST00000550471 ANKRD30AQ9BXX3 1397 aa30.89■■■□□ 2.54
GCN1-207ENST00000550471 NLRP1Q9C000 1473 aa30.89■■■□□ 2.53
GCN1-207ENST00000550471 ABCC3O15438 1527 aa30.86■■■□□ 2.53
GCN1-207ENST00000550471 FBXO31Q5XUX0 539 aaPredicted RBP30.85■■■□□ 2.53
GCN1-207ENST00000550471 THEMISQ8N1K5 641 aaPredicted RBP30.83■■■□□ 2.53
GCN1-207ENST00000550471 RRP7BPQ9NSQ0 103 aa30.83■■■□□ 2.53
GCN1-207ENST00000550471 NCKAP5LQ9HCH0 1330 aa30.81■■■□□ 2.52
GCN1-207ENST00000550471 KANK1Q14678 1352 aa30.8■■■□□ 2.52
GCN1-207ENST00000550471 IQSEC2Q5JU85 1478 aa30.79■■■□□ 2.52
GCN1-207ENST00000550471 PRDM15P57071 1507 aaPredicted RBP30.78■■■□□ 2.52
GCN1-207ENST00000550471 MROH1Q8NDA8 1641 aa30.78■■■□□ 2.52
GCN1-207ENST00000550471 ARHGAP31Q2M1Z3 1444 aa30.77■■■□□ 2.52
GCN1-207ENST00000550471 SPATA31D1Q6ZQQ2 1576 aa30.77■■■□□ 2.52
GCN1-207ENST00000550471 ADGRL2O95490 1459 aa30.76■■■□□ 2.51
GCN1-207ENST00000550471 FAM50AQ14320 339 aaKnown RBP30.75■■■□□ 2.51
GCN1-207ENST00000550471 ANKLE2Q86XL3 938 aa30.74■■■□□ 2.51
GCN1-207ENST00000550471 ERVK-7P63135 1459 aa30.73■■■□□ 2.51
GCN1-207ENST00000550471 UGGT1Q9NYU2 1555 aa30.73■■■□□ 2.51
GCN1-207ENST00000550471 CHIC2Q9UKJ5 165 aa30.72■■■□□ 2.51
GCN1-207ENST00000550471 LTBP4Q8N2S1 1624 aa30.72■■■□□ 2.51
GCN1-207ENST00000550471 DEPDC5O75140 1603 aa30.7■■■□□ 2.51
GCN1-207ENST00000550471 CEP152O94986 1710 aa30.66■■■□□ 2.5
GCN1-207ENST00000550471 LMTK2Q8IWU2 1503 aa30.65■■■□□ 2.5
GCN1-207ENST00000550471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.65■■■□□ 2.55e-10■■□□□ 13.3
GCN1-207ENST00000550471 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.64■■■□□ 2.5
GCN1-207ENST00000550471 POLR1AO95602 1720 aaPredicted RBP30.64■■■□□ 2.5
GCN1-207ENST00000550471 MED14O60244 1454 aa30.62■■■□□ 2.49
GCN1-207ENST00000550471 ZNF335Q9H4Z2 1342 aaPredicted RBP30.61■■■□□ 2.49
GCN1-207ENST00000550471 ANKRD50Q9ULJ7 1429 aa30.61■■■□□ 2.49
GCN1-207ENST00000550471 VWDEQ8N2E2 1590 aa30.6■■■□□ 2.49
GCN1-207ENST00000550471 ROCK1Q13464 1354 aa30.58■■■□□ 2.49
GCN1-207ENST00000550471 NEURL4Q96JN8 1562 aa30.57■■■□□ 2.48
GCN1-207ENST00000550471 NPHP4O75161 1426 aaPredicted RBP30.56■■■□□ 2.48
GCN1-207ENST00000550471 CPS1P31327 1500 aa30.53■■■□□ 2.48
GCN1-207ENST00000550471 RPRD2Q5VT52 1461 aaKnown RBP30.51■■■□□ 2.48
GCN1-207ENST00000550471 EID1Q9Y6B2 187 aa30.49■■■□□ 2.47
GCN1-207ENST00000550471 UBR1Q8IWV7 1749 aa30.49■■■□□ 2.47
GCN1-207ENST00000550471 CFAP65Q6ZU64 1925 aaKnown RBP30.49■■■□□ 2.47
GCN1-207ENST00000550471 EFCAB6Q5THR3 1501 aa30.48■■■□□ 2.47
GCN1-207ENST00000550471 SLC52A1Q9NWF4 448 aa30.48■■■□□ 2.47
GCN1-207ENST00000550471 STAG3Q9UJ98 1225 aa30.48■■■□□ 2.47
GCN1-207ENST00000550471 SLIT1O75093 1534 aa30.47■■■□□ 2.47
GCN1-207ENST00000550471 KDM5AP29375 1690 aaKnown RBP30.47■■■□□ 2.47
GCN1-207ENST00000550471 ARHGAP23Q9P227 1491 aa30.46■■■□□ 2.47
GCN1-207ENST00000550471 IQGAP1P46940 1657 aa30.46■■■□□ 2.47
GCN1-207ENST00000550471 SCAF11Q99590 1463 aaKnown RBP30.45■■■□□ 2.47
GCN1-207ENST00000550471 NOS1P29475 1434 aa30.45■■■□□ 2.46
GCN1-207ENST00000550471 TXNDC2Q86VQ3 553 aa30.42■■■□□ 2.46
GCN1-207ENST00000550471 TMEM2Q9UHN6 1383 aa30.41■■■□□ 2.46
GCN1-207ENST00000550471 UBAP1LF5GYI3 381 aa30.4■■■□□ 2.46
GCN1-207ENST00000550471 IDI1Q13907 227 aa30.4■■■□□ 2.46
GCN1-207ENST00000550471 TET3O43151 1660 aa30.39■■■□□ 2.45
GCN1-207ENST00000550471 UNC13BO14795 1591 aa30.38■■■□□ 2.45
GCN1-207ENST00000550471 PIK3C2BO00750 1634 aa30.37■■■□□ 2.45
GCN1-207ENST00000550471 TOM1O60784 492 aa30.36■■■□□ 2.45
GCN1-207ENST00000550471 LTKP29376 864 aa30.34■■■□□ 2.45
GCN1-207ENST00000550471 HDGFP51858 240 aaKnown RBP30.34■■■□□ 2.45
GCN1-207ENST00000550471 SYNMO15061 1565 aa30.33■■■□□ 2.45
GCN1-207ENST00000550471 RRBP1Q9P2E9 1410 aaKnown RBP30.33■■■□□ 2.45
GCN1-207ENST00000550471 GCC2Q8IWJ2 1684 aa30.32■■■□□ 2.44
GCN1-207ENST00000550471 ITGAEP38570 1179 aa30.31■■■□□ 2.44
GCN1-207ENST00000550471 PPARGC1BQ86YN6 1023 aaKnown RBP30.3■■■□□ 2.44
GCN1-207ENST00000550471 ADGRB3O60242 1522 aa30.3■■■□□ 2.44
GCN1-207ENST00000550471 NUP155O75694 1391 aa30.28■■■□□ 2.44
GCN1-207ENST00000550471 IQGAP3Q86VI3 1631 aa30.27■■■□□ 2.44
GCN1-207ENST00000550471 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.2■■■□□ 2.43
GCN1-207ENST00000550471 LRRC7Q96NW7 1537 aa30.2■■■□□ 2.42
GCN1-207ENST00000550471 E9PCH4 1651 aa30.17■■■□□ 2.42
GCN1-207ENST00000550471 PPP1R15AO75807 674 aaPredicted RBP30.14■■■□□ 2.42
GCN1-207ENST00000550471 KCNA6P17658 529 aa30.14■■■□□ 2.42
GCN1-207ENST00000550471 PLEKHG1Q9ULL1 1385 aa30.13■■■□□ 2.41
GCN1-207ENST00000550471 ZFYVE9O95405 1425 aa30.13■■■□□ 2.41
GCN1-207ENST00000550471 TMEM131LA2VDJ0 1609 aa30.12■■■□□ 2.41
GCN1-207ENST00000550471 SCAF1Q9H7N4 1312 aaKnown RBP30.12■■■□□ 2.41
GCN1-207ENST00000550471 RIMS2Q9UQ26 1411 aa30.12■■■□□ 2.41
GCN1-207ENST00000550471 STRCP1A6NGW2 1772 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms