RNA–Protein interactions for RNA: ENST00000550352.1

GNPTAB-207, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-207ENST00000550352 HS3ST6Q96QI5 342 aa11.34□□□□□ -0.59
GNPTAB-207ENST00000550352 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
GNPTAB-207ENST00000550352 BCL2L12Q9HB09 334 aa11.33□□□□□ -0.6
GNPTAB-207ENST00000550352 PRKCSHP14314 528 aaPredicted RBP11.32□□□□□ -0.6
GNPTAB-207ENST00000550352 GPR37O15354 613 aa11.31□□□□□ -0.6
GNPTAB-207ENST00000550352 PTPREP23469 700 aa11.29□□□□□ -0.6
GNPTAB-207ENST00000550352 PTGDRQ13258 359 aa11.29□□□□□ -0.6
GNPTAB-207ENST00000550352 POTEEQ6S8J3 1075 aa11.29□□□□□ -0.6
GNPTAB-207ENST00000550352 ZNF687Q8N1G0 1237 aa11.29□□□□□ -0.6
GNPTAB-207ENST00000550352 KCNK17Q96T54 332 aa11.29□□□□□ -0.6
GNPTAB-207ENST00000550352 NPDC1Q9NQX5 325 aaPredicted RBP11.29□□□□□ -0.6
GNPTAB-207ENST00000550352 FCHSD2O94868 740 aa11.28□□□□□ -0.6
GNPTAB-207ENST00000550352 COL9A1P20849 921 aa11.28□□□□□ -0.6
GNPTAB-207ENST00000550352 AXIN2Q9Y2T1 843 aa11.28□□□□□ -0.6
GNPTAB-207ENST00000550352 PSEN2P49810 448 aa11.26□□□□□ -0.61
GNPTAB-207ENST00000550352 PPP1R3GB7ZBB8 358 aa11.24□□□□□ -0.61
GNPTAB-207ENST00000550352 ARHGAP33O14559 1287 aa11.24□□□□□ -0.61
GNPTAB-207ENST00000550352 ZMYND10O75800 440 aa11.24□□□□□ -0.61
GNPTAB-207ENST00000550352 FECHP22830 423 aa11.23□□□□□ -0.61
GNPTAB-207ENST00000550352 HIC1Q14526 733 aa11.23□□□□□ -0.61
GNPTAB-207ENST00000550352 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
GNPTAB-207ENST00000550352 GNPATO15228 680 aa11.22□□□□□ -0.61
GNPTAB-207ENST00000550352 CERKQ8TCT0 537 aa11.22□□□□□ -0.61
GNPTAB-207ENST00000550352 KCNH8Q96L42 1107 aa11.22□□□□□ -0.61
GNPTAB-207ENST00000550352 POTEMA6NI47 508 aa11.21□□□□□ -0.61
GNPTAB-207ENST00000550352 PBX2P40425 430 aa11.21□□□□□ -0.61
GNPTAB-207ENST00000550352 DMRTA1Q5VZB9 504 aa11.21□□□□□ -0.61
GNPTAB-207ENST00000550352 BARGINQ6ZT62 677 aa11.21□□□□□ -0.61
GNPTAB-207ENST00000550352 PRSS12P56730 875 aa11.19□□□□□ -0.62
GNPTAB-207ENST00000550352 PADI6Q6TGC4 694 aa11.18□□□□□ -0.62
GNPTAB-207ENST00000550352 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
GNPTAB-207ENST00000550352 PROX2Q3B8N5 592 aa11.17□□□□□ -0.62
GNPTAB-207ENST00000550352 KRI1Q8N9T8 703 aaKnown RBP11.17□□□□□ -0.62
GNPTAB-207ENST00000550352 ZBED2Q9BTP6 218 aa11.17□□□□□ -0.62
GNPTAB-207ENST00000550352 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
GNPTAB-207ENST00000550352 TTC13Q8NBP0 860 aa11.15□□□□□ -0.62
GNPTAB-207ENST00000550352 SLC24A3Q9HC58 644 aa11.15□□□□□ -0.62
GNPTAB-207ENST00000550352 RBM27Q9P2N5 1060 aaKnown RBP11.15□□□□□ -0.62
GNPTAB-207ENST00000550352 TSKSQ9UJT2 592 aa11.15□□□□□ -0.62
GNPTAB-207ENST00000550352 TRIM6-TRIM34B2RNG4 842 aa11.14□□□□□ -0.63
GNPTAB-207ENST00000550352 MAP2K5Q13163 448 aa11.14□□□□□ -0.63
GNPTAB-207ENST00000550352 LSM11P83369 360 aaKnown RBP eCLIP11.13□□□□□ -0.63
GNPTAB-207ENST00000550352 FAM161AQ3B820 660 aa11.12□□□□□ -0.63
GNPTAB-207ENST00000550352 CDAN1Q8IWY9 1227 aa11.12□□□□□ -0.63
GNPTAB-207ENST00000550352 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
GNPTAB-207ENST00000550352 KRTAP3-2Q9BYR7 98 aa11.12□□□□□ -0.63
GNPTAB-207ENST00000550352 MINK1Q8N4C8 1332 aaPredicted RBP11.11□□□□□ -0.63
GNPTAB-207ENST00000550352 IRF6O14896 467 aa11.11□□□□□ -0.63
GNPTAB-207ENST00000550352 SLC4A5Q9BY07 1137 aa11.11□□□□□ -0.63
GNPTAB-207ENST00000550352 VPS9D1Q9Y2B5 631 aa11.11□□□□□ -0.63
GNPTAB-207ENST00000550352 C3orf80F5H4A9 247 aa11.1□□□□□ -0.63
GNPTAB-207ENST00000550352 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
GNPTAB-207ENST00000550352 KIAA1468Q9P260 1216 aa11.1□□□□□ -0.63
GNPTAB-207ENST00000550352 CCDC102AQ96A19 550 aa11.09□□□□□ -0.63
GNPTAB-207ENST00000550352 ADGRG1Q9Y653 693 aa11.09□□□□□ -0.63
GNPTAB-207ENST00000550352 ONECUT3O60422 494 aaPredicted RBP11.08□□□□□ -0.64
GNPTAB-207ENST00000550352 PACS2Q86VP3 889 aa11.08□□□□□ -0.64
GNPTAB-207ENST00000550352 TK2O00142 265 aa11.07□□□□□ -0.64
GNPTAB-207ENST00000550352 ADGRD1Q6QNK2 874 aa11.07□□□□□ -0.64
GNPTAB-207ENST00000550352 AK7Q96M32 723 aa11.07□□□□□ -0.64
GNPTAB-207ENST00000550352 RABGEF1Q9UJ41 708 aa11.07□□□□□ -0.64
GNPTAB-207ENST00000550352 NUDT18Q6ZVK8 323 aa11.06□□□□□ -0.64
GNPTAB-207ENST00000550352 TATDN2Q93075 761 aa11.06□□□□□ -0.64
GNPTAB-207ENST00000550352 PNMA3Q9UL41 463 aa11.06□□□□□ -0.64
GNPTAB-207ENST00000550352 NBPF26B4DH59 902 aa11.05□□□□□ -0.64
GNPTAB-207ENST00000550352 SMAPO00193 183 aa11.05□□□□□ -0.64
GNPTAB-207ENST00000550352 OATP04181 439 aa11.03□□□□□ -0.64
GNPTAB-207ENST00000550352 METTL3Q86U44 580 aaKnown RBP11.03□□□□□ -0.64
GNPTAB-207ENST00000550352 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
GNPTAB-207ENST00000550352 PHOX2BQ99453 314 aa11.03□□□□□ -0.64
GNPTAB-207ENST00000550352 EYA1Q99502 592 aa11.03□□□□□ -0.64
GNPTAB-207ENST00000550352 SEPT9Q9UHD8 586 aaPredicted RBP11.03□□□□□ -0.64
GNPTAB-207ENST00000550352 BHMG1C9JSJ3 638 aaPredicted RBP11.02□□□□□ -0.65
GNPTAB-207ENST00000550352 TRIM66O15016 1216 aa11.02□□□□□ -0.65
GNPTAB-207ENST00000550352 PXYLP1Q8TE99 480 aa11.02□□□□□ -0.65
GNPTAB-207ENST00000550352 HRO43593 1189 aa11.01□□□□□ -0.65
GNPTAB-207ENST00000550352 NLRP7Q8WX94 980 aa11□□□□□ -0.65
GNPTAB-207ENST00000550352 NBPF3Q9H094 633 aa10.99□□□□□ -0.65
GNPTAB-207ENST00000550352 RCCD1A6NED2 376 aa10.97□□□□□ -0.65
GNPTAB-207ENST00000550352 MRPL50Q8N5N7 158 aaKnown RBP10.97□□□□□ -0.65
GNPTAB-207ENST00000550352 PDE4DQ08499 809 aa10.96□□□□□ -0.65
GNPTAB-207ENST00000550352 FAM98CQ17RN3 349 aaKnown RBP10.96□□□□□ -0.65
GNPTAB-207ENST00000550352 AMHR2Q16671 573 aa10.95□□□□□ -0.66
GNPTAB-207ENST00000550352 LAPTM4BQ86VI4 370 aa10.95□□□□□ -0.66
GNPTAB-207ENST00000550352 STAC3Q96MF2 364 aa10.95□□□□□ -0.66
GNPTAB-207ENST00000550352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.94□□□□□ -0.66
GNPTAB-207ENST00000550352 DNAJB2P25686 324 aa10.94□□□□□ -0.66
GNPTAB-207ENST00000550352 MDM2Q00987 491 aaPredicted RBP10.94□□□□□ -0.66
GNPTAB-207ENST00000550352 PCDH10Q9P2E7 1040 aa10.93□□□□□ -0.66
GNPTAB-207ENST00000550352 TTLL12Q14166 644 aaPredicted RBP10.92□□□□□ -0.66
GNPTAB-207ENST00000550352 REPIN1Q9BWE0 567 aaKnown RBP10.92□□□□□ -0.66
GNPTAB-207ENST00000550352 PARP9Q8IXQ6 854 aa10.91□□□□□ -0.66
GNPTAB-207ENST00000550352 ZFRQ96KR1 1074 aaKnown RBP10.91□□□□□ -0.66
GNPTAB-207ENST00000550352 TMEM134Q9H6X4 195 aa10.91□□□□□ -0.66
GNPTAB-207ENST00000550352 BRPF1P55201 1214 aaPredicted RBP10.9□□□□□ -0.66
GNPTAB-207ENST00000550352 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
GNPTAB-207ENST00000550352 SWT1Q5T5J6 900 aaKnown RBP10.9□□□□□ -0.66
GNPTAB-207ENST00000550352 GPBP1L1Q9HC44 474 aaPredicted RBP10.9□□□□□ -0.66
GNPTAB-207ENST00000550352 GOLGA8CPA6NN73 597 aa10.89□□□□□ -0.67
GNPTAB-207ENST00000550352 CLCN1P35523 988 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms