RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 FLIIQ13045 1269 aa10.73□□□□□ -0.69
HCFC2-204ENST00000550335 TSR1Q2NL82 804 aaKnown RBP10.73□□□□□ -0.69
HCFC2-204ENST00000550335 NPDC1Q9NQX5 325 aaPredicted RBP10.73□□□□□ -0.69
HCFC2-204ENST00000550335 METRNQ9UJH8 293 aa10.73□□□□□ -0.69
HCFC2-204ENST00000550335 UBTFP17480 764 aaKnown RBP10.72□□□□□ -0.69
HCFC2-204ENST00000550335 CLCN1P35523 988 aa10.72□□□□□ -0.69
HCFC2-204ENST00000550335 FAM161AQ3B820 660 aa10.72□□□□□ -0.69
HCFC2-204ENST00000550335 ARID3CA6NKF2 412 aa10.71□□□□□ -0.69
HCFC2-204ENST00000550335 SLAIN1Q8ND83 568 aa10.71□□□□□ -0.69
HCFC2-204ENST00000550335 PCDHGA10Q9Y5H3 936 aa10.71□□□□□ -0.69
HCFC2-204ENST00000550335 SLC34A2O95436 690 aa10.7□□□□□ -0.7
HCFC2-204ENST00000550335 SSTR3P32745 418 aaPredicted RBP10.7□□□□□ -0.7
HCFC2-204ENST00000550335 TYW1BQ6NUM6 668 aa10.7□□□□□ -0.7
HCFC2-204ENST00000550335 GPCPD1Q9NPB8 672 aa10.7□□□□□ -0.7
HCFC2-204ENST00000550335 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.7□□□□□ -0.7
HCFC2-204ENST00000550335 GOPCQ9HD26 462 aa10.69□□□□□ -0.7
HCFC2-204ENST00000550335 PCDHGA4Q9Y5G9 962 aa10.69□□□□□ -0.7
HCFC2-204ENST00000550335 APBB1O00213 710 aa10.68□□□□□ -0.7
HCFC2-204ENST00000550335 NLRP7Q8WX94 980 aa10.68□□□□□ -0.7
HCFC2-204ENST00000550335 PHOX2BQ99453 314 aa10.68□□□□□ -0.7
HCFC2-204ENST00000550335 BEGAINQ9BUH8 593 aa10.65□□□□□ -0.7
HCFC2-204ENST00000550335 FBXW7Q969H0 707 aa10.64□□□□□ -0.71
HCFC2-204ENST00000550335 CLUAP1Q96AJ1 413 aa10.64□□□□□ -0.71
HCFC2-204ENST00000550335 POLR3EQ9NVU0 708 aa10.64□□□□□ -0.71
HCFC2-204ENST00000550335 SH3D19Q5HYK7 790 aa10.63□□□□□ -0.71
HCFC2-204ENST00000550335 PADI6Q6TGC4 694 aa10.63□□□□□ -0.71
HCFC2-204ENST00000550335 OATP04181 439 aa10.62□□□□□ -0.71
HCFC2-204ENST00000550335 ZNF454Q8N9F8 522 aa10.62□□□□□ -0.71
HCFC2-204ENST00000550335 TMUB1Q9BVT8 246 aa10.62□□□□□ -0.71
HCFC2-204ENST00000550335 C1orf115Q9H7X2 142 aa10.62□□□□□ -0.71
HCFC2-204ENST00000550335 SKIV2LQ15477 1246 aaKnown RBP10.61□□□□□ -0.71
HCFC2-204ENST00000550335 C6orf132Q5T0Z8 1188 aa10.61□□□□□ -0.71
HCFC2-204ENST00000550335 PROCA1Q8NCQ7 364 aaPredicted RBP10.61□□□□□ -0.71
HCFC2-204ENST00000550335 JPH4Q96JJ6 628 aa10.61□□□□□ -0.71
HCFC2-204ENST00000550335 METTL3Q86U44 580 aaKnown RBP10.6□□□□□ -0.71
HCFC2-204ENST00000550335 ZDHHC16Q969W1 377 aa10.58□□□□□ -0.72
HCFC2-204ENST00000550335 FAM217BQ9NTX9 383 aaPredicted RBP10.58□□□□□ -0.72
HCFC2-204ENST00000550335 NUDT7P0C024 238 aa10.57□□□□□ -0.72
HCFC2-204ENST00000550335 POTEIP0CG38 1075 aa10.57□□□□□ -0.72
HCFC2-204ENST00000550335 FOSBP53539 338 aa10.57□□□□□ -0.72
HCFC2-204ENST00000550335 CERKQ8TCT0 537 aa10.57□□□□□ -0.72
HCFC2-204ENST00000550335 KHSRPQ92945 711 aaKnown RBP eCLIP10.57□□□□□ -0.72
HCFC2-204ENST00000550335 ADGRG1Q9Y653 693 aa10.57□□□□□ -0.72
HCFC2-204ENST00000550335 ONECUT3O60422 494 aaPredicted RBP10.56□□□□□ -0.72
HCFC2-204ENST00000550335 PXYLP1Q8TE99 480 aa10.56□□□□□ -0.72
HCFC2-204ENST00000550335 ARSIQ5FYB1 569 aa10.55□□□□□ -0.72
HCFC2-204ENST00000550335 TRAK2O60296 914 aa10.54□□□□□ -0.72
HCFC2-204ENST00000550335 MCM6Q14566 821 aa10.53□□□□□ -0.72
HCFC2-204ENST00000550335 RBM46Q8TBY0 533 aaKnown RBP10.53□□□□□ -0.72
HCFC2-204ENST00000550335 ADAM33Q9BZ11 813 aa10.53□□□□□ -0.72
HCFC2-204ENST00000550335 PODXL2Q9NZ53 605 aa10.53□□□□□ -0.72
HCFC2-204ENST00000550335 A6NJR5 290 aa10.52□□□□□ -0.73
HCFC2-204ENST00000550335 RAD21O60216 631 aa10.52□□□□□ -0.73
HCFC2-204ENST00000550335 MYSM1Q5VVJ2 828 aa10.52□□□□□ -0.73
HCFC2-204ENST00000550335 ZNF777Q9ULD5 760 aaPredicted RBP10.52□□□□□ -0.73
HCFC2-204ENST00000550335 PRSS12P56730 875 aa10.51□□□□□ -0.73
HCFC2-204ENST00000550335 CDCA7LQ96GN5 454 aa10.51□□□□□ -0.73
HCFC2-204ENST00000550335 TBC1D2Q9BYX2 928 aa10.51□□□□□ -0.73
HCFC2-204ENST00000550335 KDM4FA0A1W2PPD8 638 aa10.5□□□□□ -0.73
HCFC2-204ENST00000550335 CLK2P49760 499 aaKnown RBP10.5□□□□□ -0.73
HCFC2-204ENST00000550335 DOK7Q18PE1 504 aa10.49□□□□□ -0.73
HCFC2-204ENST00000550335 CCDC82Q8N4S0 544 aa10.49□□□□□ -0.73
HCFC2-204ENST00000550335 POM121Q96HA1 1249 aa10.49□□□□□ -0.73
HCFC2-204ENST00000550335 RIMBP2O15034 1052 aa10.48□□□□□ -0.73
HCFC2-204ENST00000550335 PROSER2Q86WR7 435 aaPredicted RBP10.47□□□□□ -0.73
HCFC2-204ENST00000550335 ZNF710Q8N1W2 664 aa10.47□□□□□ -0.73
HCFC2-204ENST00000550335 DIXDC1Q155Q3 683 aa10.46□□□□□ -0.73
HCFC2-204ENST00000550335 CSPP1Q1MSJ5 1256 aa10.46□□□□□ -0.73
HCFC2-204ENST00000550335 TTC13Q8NBP0 860 aa10.46□□□□□ -0.73
HCFC2-204ENST00000550335 RCCD1A6NED2 376 aa10.45□□□□□ -0.74
HCFC2-204ENST00000550335 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
HCFC2-204ENST00000550335 RBM27Q9P2N5 1060 aaKnown RBP10.45□□□□□ -0.74
HCFC2-204ENST00000550335 RFC5P40937 340 aa10.44□□□□□ -0.74
HCFC2-204ENST00000550335 RIC3Q7Z5B4 369 aa10.44□□□□□ -0.74
HCFC2-204ENST00000550335 NUTM1Q86Y26 1132 aa10.44□□□□□ -0.74
HCFC2-204ENST00000550335 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.44□□□□□ -0.74
HCFC2-204ENST00000550335 SNRKQ9NRH2 765 aa10.44□□□□□ -0.74
HCFC2-204ENST00000550335 LHX6Q9UPM6 363 aa10.44□□□□□ -0.74
HCFC2-204ENST00000550335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.43□□□□□ -0.74
HCFC2-204ENST00000550335 DDX11L8A8MPP1 907 aa10.43□□□□□ -0.74
HCFC2-204ENST00000550335 COL9A1P20849 921 aa10.43□□□□□ -0.74
HCFC2-204ENST00000550335 LIMD1Q9UGP4 676 aa10.43□□□□□ -0.74
HCFC2-204ENST00000550335 PPP4R3BQ5MIZ7 849 aa10.42□□□□□ -0.74
HCFC2-204ENST00000550335 NUDT18Q6ZVK8 323 aa10.42□□□□□ -0.74
HCFC2-204ENST00000550335 SPIRE2Q8WWL2 714 aa10.42□□□□□ -0.74
HCFC2-204ENST00000550335 FAM198AQ9UFP1 575 aa10.42□□□□□ -0.74
HCFC2-204ENST00000550335 SPDYE5A6NIY4 337 aa10.4□□□□□ -0.74
HCFC2-204ENST00000550335 HOXB3P14651 431 aaPredicted RBP10.4□□□□□ -0.74
HCFC2-204ENST00000550335 GPR153Q6NV75 609 aa10.4□□□□□ -0.74
HCFC2-204ENST00000550335 PNMA3Q9UL41 463 aa10.4□□□□□ -0.74
HCFC2-204ENST00000550335 PDIA4P13667 645 aaKnown RBP10.39□□□□□ -0.75
HCFC2-204ENST00000550335 FBXO31Q5XUX0 539 aaPredicted RBP10.39□□□□□ -0.75
HCFC2-204ENST00000550335 CCDC97Q96F63 343 aaPredicted RBP10.39□□□□□ -0.75
HCFC2-204ENST00000550335 TSKSQ9UJT2 592 aa10.39□□□□□ -0.75
HCFC2-204ENST00000550335 COG6Q9Y2V7 657 aa10.39□□□□□ -0.75
HCFC2-204ENST00000550335 PTPREP23469 700 aa10.38□□□□□ -0.75
HCFC2-204ENST00000550335 TMEM259Q4ZIN3 620 aa10.38□□□□□ -0.75
HCFC2-204ENST00000550335 SULF1Q8IWU6 871 aa10.38□□□□□ -0.75
HCFC2-204ENST00000550335 BANK1Q8NDB2 785 aa10.38□□□□□ -0.75
HCFC2-204ENST00000550335 EYA1Q99502 592 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms