RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 NCOA1Q15788 1441 aa17.3■□□□□ 0.36
RAB5B-208ENST00000550283 C3P01024 1663 aa17.29■□□□□ 0.36
RAB5B-208ENST00000550283 CLTCQ00610 1675 aaKnown RBP17.29■□□□□ 0.36
RAB5B-208ENST00000550283 RRBP1Q9P2E9 1410 aaKnown RBP17.29■□□□□ 0.36
RAB5B-208ENST00000550283 ADGRL2O95490 1459 aa17.28■□□□□ 0.36
RAB5B-208ENST00000550283 DUOX2Q9NRD8 1548 aa17.27■□□□□ 0.36
RAB5B-208ENST00000550283 ITGAEP38570 1179 aa17.27■□□□□ 0.36
RAB5B-208ENST00000550283 RNF17Q9BXT8 1623 aaKnown RBP17.25■□□□□ 0.35
RAB5B-208ENST00000550283 ZMYM3Q14202 1370 aa17.25■□□□□ 0.35
RAB5B-208ENST00000550283 ANKRD30AQ9BXX3 1397 aa17.24■□□□□ 0.35
RAB5B-208ENST00000550283 EIF2AK4Q9P2K8 1649 aaKnown RBP17.23■□□□□ 0.35
RAB5B-208ENST00000550283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.23■□□□□ 0.35
RAB5B-208ENST00000550283 MROH2AA6NES4 1674 aa17.23■□□□□ 0.35
RAB5B-208ENST00000550283 ERBINQ96RT1 1412 aa17.21■□□□□ 0.35
RAB5B-208ENST00000550283 CNTLNQ9NXG0 1405 aa17.21■□□□□ 0.35
RAB5B-208ENST00000550283 HSPA2P54652 639 aa17.21■□□□□ 0.35
RAB5B-208ENST00000550283 ABCC3O15438 1527 aa17.21■□□□□ 0.34
RAB5B-208ENST00000550283 DISP3Q9P2K9 1392 aa17.2■□□□□ 0.34
RAB5B-208ENST00000550283 FBXO31Q5XUX0 539 aaPredicted RBP17.2■□□□□ 0.34
RAB5B-208ENST00000550283 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
RAB5B-208ENST00000550283 ESF1Q9H501 851 aaKnown RBP17.19■□□□□ 0.34
RAB5B-208ENST00000550283 DEPDC5O75140 1603 aa17.18■□□□□ 0.34
RAB5B-208ENST00000550283 CEP152O94986 1710 aa17.18■□□□□ 0.34
RAB5B-208ENST00000550283 PRDM15P57071 1507 aaPredicted RBP17.17■□□□□ 0.34
RAB5B-208ENST00000550283 WASHC2CQ9Y4E1 1318 aa17.17■□□□□ 0.34
RAB5B-208ENST00000550283 ROCK1Q13464 1354 aa17.16■□□□□ 0.34
RAB5B-208ENST00000550283 ANKRD50Q9ULJ7 1429 aa17.16■□□□□ 0.34
RAB5B-208ENST00000550283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.34
RAB5B-208ENST00000550283 PPP6R1Q9UPN7 881 aa17.16■□□□□ 0.34
RAB5B-208ENST00000550283 VWDEQ8N2E2 1590 aa17.15■□□□□ 0.34
RAB5B-208ENST00000550283 PREX1Q8TCU6 1659 aa17.14■□□□□ 0.33
RAB5B-208ENST00000550283 PZPP20742 1482 aa17.13■□□□□ 0.33
RAB5B-208ENST00000550283 NPATQ14207 1427 aa17.13■□□□□ 0.33
RAB5B-208ENST00000550283 CAMSAP1Q5T5Y3 1602 aa17.12■□□□□ 0.33
RAB5B-208ENST00000550283 FAM135AQ9P2D6 1515 aa17.11■□□□□ 0.33
RAB5B-208ENST00000550283 MYO3AQ8NEV4 1616 aa17.1■□□□□ 0.33
RAB5B-208ENST00000550283 ZC3H13Q5T200 1668 aaKnown RBP17.1■□□□□ 0.33
RAB5B-208ENST00000550283 NAIPQ13075 1403 aa17.1■□□□□ 0.33
RAB5B-208ENST00000550283 UHRF1BP1Q6BDS2 1440 aa17.1■□□□□ 0.33
RAB5B-208ENST00000550283 UNC13BO14795 1591 aa17.08■□□□□ 0.32
RAB5B-208ENST00000550283 LMTK2Q8IWU2 1503 aa17.07■□□□□ 0.32
RAB5B-208ENST00000550283 ERVK-7P63135 1459 aa17.07■□□□□ 0.32
RAB5B-208ENST00000550283 TNRQ92752 1358 aa17.07■□□□□ 0.32
RAB5B-208ENST00000550283 SPATA31D1Q6ZQQ2 1576 aa17.06■□□□□ 0.32
RAB5B-208ENST00000550283 SETD1BQ9UPS6 1966 aaKnown RBP17.06■□□□□ 0.32
RAB5B-208ENST00000550283 CEP170BQ9Y4F5 1589 aaPredicted RBP17.04■□□□□ 0.32
RAB5B-208ENST00000550283 EFCAB6Q5THR3 1501 aa17.04■□□□□ 0.32
RAB5B-208ENST00000550283 STRCQ7RTU9 1775 aa17.04■□□□□ 0.32
RAB5B-208ENST00000550283 ARHGAP31Q2M1Z3 1444 aa17.04■□□□□ 0.32
RAB5B-208ENST00000550283 ZNF142P52746 1687 aaPredicted RBP17.04■□□□□ 0.32
RAB5B-208ENST00000550283 GCC2Q8IWJ2 1684 aa17.04■□□□□ 0.32
RAB5B-208ENST00000550283 CFAP65Q6ZU64 1925 aaKnown RBP17.04■□□□□ 0.32
RAB5B-208ENST00000550283 HFM1A2PYH4 1435 aa17.03■□□□□ 0.32
RAB5B-208ENST00000550283 KANK1Q14678 1352 aa17.02■□□□□ 0.31
RAB5B-208ENST00000550283 A2ML1A8K2U0 1454 aa17.01■□□□□ 0.31
RAB5B-208ENST00000550283 SYNMO15061 1565 aa17.01■□□□□ 0.31
RAB5B-208ENST00000550283 IQGAP3Q86VI3 1631 aa17■□□□□ 0.31
RAB5B-208ENST00000550283 NUP155O75694 1391 aa17■□□□□ 0.31
RAB5B-208ENST00000550283 TET3O43151 1660 aa16.98■□□□□ 0.31
RAB5B-208ENST00000550283 E9PCH4 1651 aa16.97■□□□□ 0.31
RAB5B-208ENST00000550283 NCKAP5LQ9HCH0 1330 aa16.97■□□□□ 0.31
RAB5B-208ENST00000550283 NOS1P29475 1434 aa16.97■□□□□ 0.31
RAB5B-208ENST00000550283 UGGT1Q9NYU2 1555 aa16.96■□□□□ 0.31
RAB5B-208ENST00000550283 NLRP1Q9C000 1473 aa16.95■□□□□ 0.3
RAB5B-208ENST00000550283 CERKQ8TCT0 537 aa16.95■□□□□ 0.3
RAB5B-208ENST00000550283 PIK3C2BO00750 1634 aa16.93■□□□□ 0.3
RAB5B-208ENST00000550283 IDI1Q13907 227 aa16.93■□□□□ 0.3
RAB5B-208ENST00000550283 UBR1Q8IWV7 1749 aa16.92■□□□□ 0.3
RAB5B-208ENST00000550283 NEURL4Q96JN8 1562 aa16.91■□□□□ 0.3
RAB5B-208ENST00000550283 PLA2R1Q13018 1463 aa16.91■□□□□ 0.3
RAB5B-208ENST00000550283 RPRD2Q5VT52 1461 aaKnown RBP16.9■□□□□ 0.3
RAB5B-208ENST00000550283 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
RAB5B-208ENST00000550283 SETD5Q9C0A6 1442 aa16.87■□□□□ 0.29
RAB5B-208ENST00000550283 LTKP29376 864 aa16.86■□□□□ 0.29
RAB5B-208ENST00000550283 RAB3GAP2Q9H2M9 1393 aa16.86■□□□□ 0.29
RAB5B-208ENST00000550283 PTPRTO14522 1441 aa16.86■□□□□ 0.29
RAB5B-208ENST00000550283 ARHGAP23Q9P227 1491 aa16.85■□□□□ 0.29
RAB5B-208ENST00000550283 PKD2Q13563 968 aa16.84■□□□□ 0.29
RAB5B-208ENST00000550283 THEMISQ8N1K5 641 aaPredicted RBP16.84■□□□□ 0.29
RAB5B-208ENST00000550283 ADGRB3O60242 1522 aa16.84■□□□□ 0.29
RAB5B-208ENST00000550283 TMEM131LA2VDJ0 1609 aa16.83■□□□□ 0.28
RAB5B-208ENST00000550283 SLIT1O75093 1534 aa16.83■□□□□ 0.28
RAB5B-208ENST00000550283 POLR1AO95602 1720 aaPredicted RBP16.83■□□□□ 0.28
RAB5B-208ENST00000550283 MYO5BQ9ULV0 1848 aa16.83■□□□□ 0.28
RAB5B-208ENST00000550283 SPHKAPQ2M3C7 1700 aa16.82■□□□□ 0.28
RAB5B-208ENST00000550283 TMEM2Q9UHN6 1383 aa16.81■□□□□ 0.28
RAB5B-208ENST00000550283 SLC4A1APQ9BWU0 796 aaKnown RBP16.81■□□□□ 0.28
RAB5B-208ENST00000550283 CLTCL1P53675 1640 aa16.81■□□□□ 0.28
RAB5B-208ENST00000550283 ZNF335Q9H4Z2 1342 aaPredicted RBP16.8■□□□□ 0.28
RAB5B-208ENST00000550283 SLC52A1Q9NWF4 448 aa16.8■□□□□ 0.28
RAB5B-208ENST00000550283 MED14O60244 1454 aa16.8■□□□□ 0.28
RAB5B-208ENST00000550283 LTBP4Q8N2S1 1624 aa16.79■□□□□ 0.28
RAB5B-208ENST00000550283 ANKLE2Q86XL3 938 aa16.79■□□□□ 0.28
RAB5B-208ENST00000550283 MPHOSPH9Q99550 1183 aa16.79■□□□□ 0.28
RAB5B-208ENST00000550283 NPHP4O75161 1426 aaPredicted RBP16.79■□□□□ 0.28
RAB5B-208ENST00000550283 KDM5AP29375 1690 aaKnown RBP16.78■□□□□ 0.28
RAB5B-208ENST00000550283 TRPM2O94759 1503 aa16.78■□□□□ 0.28
RAB5B-208ENST00000550283 SCAF11Q99590 1463 aaKnown RBP16.78■□□□□ 0.28
RAB5B-208ENST00000550283 ZFYVE9O95405 1425 aa16.78■□□□□ 0.28
RAB5B-208ENST00000550283 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms