RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 KDM5DQ9BY66 1539 aa20.19■□□□□ 0.82
LETMD1-222ENST00000550274 SPATA31D1Q6ZQQ2 1576 aa20.19■□□□□ 0.82
LETMD1-222ENST00000550274 DISP3Q9P2K9 1392 aa20.19■□□□□ 0.82
LETMD1-222ENST00000550274 PKD2Q13563 968 aa20.18■□□□□ 0.82
LETMD1-222ENST00000550274 FAM135AQ9P2D6 1515 aa20.17■□□□□ 0.82
LETMD1-222ENST00000550274 KIF3BO15066 747 aa20.16■□□□□ 0.82
LETMD1-222ENST00000550274 PZPP20742 1482 aa20.16■□□□□ 0.82
LETMD1-222ENST00000550274 NEURL4Q96JN8 1562 aa20.16■□□□□ 0.82
LETMD1-222ENST00000550274 ILDR2Q71H61 639 aa20.14■□□□□ 0.81
LETMD1-222ENST00000550274 FBXO31Q5XUX0 539 aaPredicted RBP20.13■□□□□ 0.81
LETMD1-222ENST00000550274 LRRC9Q6ZRR7 1453 aa20.12■□□□□ 0.81
LETMD1-222ENST00000550274 TNRQ92752 1358 aa20.12■□□□□ 0.81
LETMD1-222ENST00000550274 RNF17Q9BXT8 1623 aaKnown RBP20.12■□□□□ 0.81
LETMD1-222ENST00000550274 MAST1Q9Y2H9 1570 aa20.11■□□□□ 0.81
LETMD1-222ENST00000550274 VPS8Q8N3P4 1428 aa20.1■□□□□ 0.81
LETMD1-222ENST00000550274 RSPH4AQ5TD94 716 aa20.1■□□□□ 0.81
LETMD1-222ENST00000550274 ZC3H13Q5T200 1668 aaKnown RBP20.1■□□□□ 0.81
LETMD1-222ENST00000550274 CFAP65Q6ZU64 1925 aaKnown RBP20.1■□□□□ 0.81
LETMD1-222ENST00000550274 WASHC2CQ9Y4E1 1318 aa20.08■□□□□ 0.81
LETMD1-222ENST00000550274 EIF2AK4Q9P2K8 1649 aaKnown RBP20.08■□□□□ 0.8
LETMD1-222ENST00000550274 CEP152O94986 1710 aa20.07■□□□□ 0.8
LETMD1-222ENST00000550274 UBAP1LF5GYI3 381 aa20.07■□□□□ 0.8
LETMD1-222ENST00000550274 MROH1Q8NDA8 1641 aa20.06■□□□□ 0.8
LETMD1-222ENST00000550274 ABCC3O15438 1527 aa20.05■□□□□ 0.8
LETMD1-222ENST00000550274 UGGT1Q9NYU2 1555 aa20.04■□□□□ 0.8
LETMD1-222ENST00000550274 MIA2Q96PC5 1412 aa20.04■□□□□ 0.8
LETMD1-222ENST00000550274 TSPY4P0CV99 314 aa20.04■□□□□ 0.8
LETMD1-222ENST00000550274 TSPY10P0CW01 314 aa20.04■□□□□ 0.8
LETMD1-222ENST00000550274 DEPDC5O75140 1603 aa20.04■□□□□ 0.8
LETMD1-222ENST00000550274 NLRP1Q9C000 1473 aa20.04■□□□□ 0.8
LETMD1-222ENST00000550274 MAP3K1Q13233 1512 aa20.03■□□□□ 0.8
LETMD1-222ENST00000550274 LOC105371045A0A1W2PR82 267 aa20.03■□□□□ 0.8
LETMD1-222ENST00000550274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.03■□□□□ 0.8
LETMD1-222ENST00000550274 VWDEQ8N2E2 1590 aa20.03■□□□□ 0.8
LETMD1-222ENST00000550274 CPS1P31327 1500 aa20.02■□□□□ 0.8
LETMD1-222ENST00000550274 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.8
LETMD1-222ENST00000550274 CROCC2H7BZ55 1655 aa20.02■□□□□ 0.8
LETMD1-222ENST00000550274 IQGAP1P46940 1657 aa20.02■□□□□ 0.8
LETMD1-222ENST00000550274 SHANK2Q9UPX8 1470 aa20.01■□□□□ 0.79
LETMD1-222ENST00000550274 STRCP1A6NGW2 1772 aa20■□□□□ 0.79
LETMD1-222ENST00000550274 MYOM3Q5VTT5 1437 aa20■□□□□ 0.79
LETMD1-222ENST00000550274 MED14O60244 1454 aa19.99■□□□□ 0.79
LETMD1-222ENST00000550274 SOCS7O14512 581 aa19.99■□□□□ 0.79
LETMD1-222ENST00000550274 UBR1Q8IWV7 1749 aa19.99■□□□□ 0.79
LETMD1-222ENST00000550274 ERVK-7P63135 1459 aa19.98■□□□□ 0.79
LETMD1-222ENST00000550274 NPHP4O75161 1426 aaPredicted RBP19.97■□□□□ 0.79
LETMD1-222ENST00000550274 ANKLE2Q86XL3 938 aa19.97■□□□□ 0.79
LETMD1-222ENST00000550274 THEMISQ8N1K5 641 aaPredicted RBP19.97■□□□□ 0.79
LETMD1-222ENST00000550274 DUOX2Q9NRD8 1548 aa19.96■□□□□ 0.79
LETMD1-222ENST00000550274 ALKQ9UM73 1620 aa19.94■□□□□ 0.78
LETMD1-222ENST00000550274 PTPN23Q9H3S7 1636 aa19.94■□□□□ 0.78
LETMD1-222ENST00000550274 PRDM15P57071 1507 aaPredicted RBP19.93■□□□□ 0.78
LETMD1-222ENST00000550274 PIP4K2BP78356 416 aa19.9■□□□□ 0.78
LETMD1-222ENST00000550274 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
LETMD1-222ENST00000550274 SYNMO15061 1565 aa19.89■□□□□ 0.77
LETMD1-222ENST00000550274 HSPA1LP34931 641 aa19.89■□□□□ 0.77
LETMD1-222ENST00000550274 MED1Q15648 1581 aaPredicted RBP19.88■□□□□ 0.77
LETMD1-222ENST00000550274 ABCC5O15440 1437 aa19.88■□□□□ 0.77
LETMD1-222ENST00000550274 KIF15Q9NS87 1388 aa19.88■□□□□ 0.77
LETMD1-222ENST00000550274 TOM1O60784 492 aa19.87■□□□□ 0.77
LETMD1-222ENST00000550274 ERBINQ96RT1 1412 aa19.86■□□□□ 0.77
LETMD1-222ENST00000550274 XIRP1Q702N8 1843 aaKnown RBP19.86■□□□□ 0.77
LETMD1-222ENST00000550274 PIK3C2BO00750 1634 aa19.86■□□□□ 0.77
LETMD1-222ENST00000550274 LRRC7Q96NW7 1537 aa19.86■□□□□ 0.77
LETMD1-222ENST00000550274 SLIT1O75093 1534 aa19.84■□□□□ 0.77
LETMD1-222ENST00000550274 SCAF11Q99590 1463 aaKnown RBP19.84■□□□□ 0.77
LETMD1-222ENST00000550274 ARHGAP23Q9P227 1491 aa19.84■□□□□ 0.77
LETMD1-222ENST00000550274 DAPK1P53355 1430 aa19.84■□□□□ 0.77
LETMD1-222ENST00000550274 ARHGAP31Q2M1Z3 1444 aa19.84■□□□□ 0.77
LETMD1-222ENST00000550274 RRP7BPQ9NSQ0 103 aa19.82■□□□□ 0.76
LETMD1-222ENST00000550274 FGD6Q6ZV73 1430 aa19.81■□□□□ 0.76
LETMD1-222ENST00000550274 KDM5AP29375 1690 aaKnown RBP19.8■□□□□ 0.76
LETMD1-222ENST00000550274 LTKP29376 864 aa19.78■□□□□ 0.76
LETMD1-222ENST00000550274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.77■□□□□ 0.763e-14■□□□□ 10.9
LETMD1-222ENST00000550274 LMTK2Q8IWU2 1503 aa19.76■□□□□ 0.75
LETMD1-222ENST00000550274 APLP2Q06481 763 aa19.75■□□□□ 0.75
LETMD1-222ENST00000550274 TXNDC2Q86VQ3 553 aa19.75■□□□□ 0.75
LETMD1-222ENST00000550274 MYO5BQ9ULV0 1848 aa19.74■□□□□ 0.75
LETMD1-222ENST00000550274 KANK1Q14678 1352 aa19.73■□□□□ 0.75
LETMD1-222ENST00000550274 EFCAB6Q5THR3 1501 aa19.73■□□□□ 0.75
LETMD1-222ENST00000550274 ANKRD30AQ9BXX3 1397 aa19.72■□□□□ 0.75
LETMD1-222ENST00000550274 TMEM2Q9UHN6 1383 aa19.72■□□□□ 0.75
LETMD1-222ENST00000550274 CHIC2Q9UKJ5 165 aa19.72■□□□□ 0.75
LETMD1-222ENST00000550274 FOXD1Q16676 465 aa19.7■□□□□ 0.74
LETMD1-222ENST00000550274 ADGRL2O95490 1459 aa19.7■□□□□ 0.74
LETMD1-222ENST00000550274 EID1Q9Y6B2 187 aa19.69■□□□□ 0.74
LETMD1-222ENST00000550274 ADGRB3O60242 1522 aa19.69■□□□□ 0.74
LETMD1-222ENST00000550274 TET3O43151 1660 aa19.68■□□□□ 0.74
LETMD1-222ENST00000550274 NOS1P29475 1434 aa19.68■□□□□ 0.74
LETMD1-222ENST00000550274 IDI1Q13907 227 aa19.67■□□□□ 0.74
LETMD1-222ENST00000550274 GCC2Q8IWJ2 1684 aa19.66■□□□□ 0.74
LETMD1-222ENST00000550274 STAG3Q9UJ98 1225 aa19.66■□□□□ 0.74
LETMD1-222ENST00000550274 NWD1Q149M9 1564 aa19.63■□□□□ 0.73
LETMD1-222ENST00000550274 ROBO1Q9Y6N7 1651 aa19.62■□□□□ 0.73
LETMD1-222ENST00000550274 ANKRD50Q9ULJ7 1429 aa19.6■□□□□ 0.73
LETMD1-222ENST00000550274 CHD2O14647 1828 aaKnown RBP19.6■□□□□ 0.73
LETMD1-222ENST00000550274 TMEM94Q12767 1356 aa19.6■□□□□ 0.73
LETMD1-222ENST00000550274 UNC13BO14795 1591 aa19.6■□□□□ 0.73
LETMD1-222ENST00000550274 RPRD2Q5VT52 1461 aaKnown RBP19.6■□□□□ 0.73
LETMD1-222ENST00000550274 TMEM131LA2VDJ0 1609 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms