RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 NCKAP5LQ9HCH0 1330 aa21.09■□□□□ 0.97
NUP188-211ENST00000550219 MAST1Q9Y2H9 1570 aa21.09■□□□□ 0.97
NUP188-211ENST00000550219 FAM135AQ9P2D6 1515 aa21.09■□□□□ 0.97
NUP188-211ENST00000550219 PLA2R1Q13018 1463 aa21.07■□□□□ 0.96
NUP188-211ENST00000550219 LTBP4Q8N2S1 1624 aa21.07■□□□□ 0.96
NUP188-211ENST00000550219 A2ML1A8K2U0 1454 aa21.07■□□□□ 0.96
NUP188-211ENST00000550219 PZPP20742 1482 aa21.07■□□□□ 0.96
NUP188-211ENST00000550219 WASHC2CQ9Y4E1 1318 aa21.05■□□□□ 0.96
NUP188-211ENST00000550219 MIA2Q96PC5 1412 aa21.05■□□□□ 0.96
NUP188-211ENST00000550219 TNRQ92752 1358 aa21.05■□□□□ 0.96
NUP188-211ENST00000550219 DNMT1P26358 1616 aaKnown RBP21.04■□□□□ 0.96
NUP188-211ENST00000550219 RNF17Q9BXT8 1623 aaKnown RBP21.04■□□□□ 0.96
NUP188-211ENST00000550219 TCOF1Q13428 1488 aaKnown RBP21.03■□□□□ 0.96
NUP188-211ENST00000550219 APLP2Q06481 763 aa21.03■□□□□ 0.96
NUP188-211ENST00000550219 FBXO31Q5XUX0 539 aaPredicted RBP21.03■□□□□ 0.96
NUP188-211ENST00000550219 EIF2AK4Q9P2K8 1649 aaKnown RBP21.01■□□□□ 0.95
NUP188-211ENST00000550219 PKD2Q13563 968 aa21.01■□□□□ 0.95
NUP188-211ENST00000550219 CROCC2H7BZ55 1655 aa21■□□□□ 0.95
NUP188-211ENST00000550219 ZC3H13Q5T200 1668 aaKnown RBP21■□□□□ 0.95
NUP188-211ENST00000550219 ZNF335Q9H4Z2 1342 aaPredicted RBP21■□□□□ 0.95
NUP188-211ENST00000550219 PTPN23Q9H3S7 1636 aa21■□□□□ 0.95
NUP188-211ENST00000550219 ABCC3O15438 1527 aa20.99■□□□□ 0.95
NUP188-211ENST00000550219 POLR1AO95602 1720 aaPredicted RBP20.98■□□□□ 0.95
NUP188-211ENST00000550219 MROH1Q8NDA8 1641 aa20.97■□□□□ 0.95
NUP188-211ENST00000550219 IQSEC2Q5JU85 1478 aa20.96■□□□□ 0.95
NUP188-211ENST00000550219 CEP152O94986 1710 aa20.96■□□□□ 0.95
NUP188-211ENST00000550219 DUOX2Q9NRD8 1548 aa20.96■□□□□ 0.95
NUP188-211ENST00000550219 SHANK2Q9UPX8 1470 aa20.94■□□□□ 0.94
NUP188-211ENST00000550219 NEURL4Q96JN8 1562 aa20.94■□□□□ 0.94
NUP188-211ENST00000550219 KIF15Q9NS87 1388 aa20.94■□□□□ 0.94
NUP188-211ENST00000550219 NLRP1Q9C000 1473 aa20.94■□□□□ 0.94
NUP188-211ENST00000550219 UGGT1Q9NYU2 1555 aa20.93■□□□□ 0.94
NUP188-211ENST00000550219 ABCC5O15440 1437 aa20.93■□□□□ 0.94
NUP188-211ENST00000550219 DAPK1P53355 1430 aa20.92■□□□□ 0.94
NUP188-211ENST00000550219 FGD6Q6ZV73 1430 aa20.92■□□□□ 0.94
NUP188-211ENST00000550219 ERVK-7P63135 1459 aa20.91■□□□□ 0.94
NUP188-211ENST00000550219 SPATA31D1Q6ZQQ2 1576 aa20.91■□□□□ 0.94
NUP188-211ENST00000550219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.91■□□□□ 0.949e-6■□□□□ 9.6
NUP188-211ENST00000550219 RRP7BPQ9NSQ0 103 aa20.89■□□□□ 0.93
NUP188-211ENST00000550219 PRDM15P57071 1507 aaPredicted RBP20.88■□□□□ 0.93
NUP188-211ENST00000550219 ERBINQ96RT1 1412 aa20.88■□□□□ 0.93
NUP188-211ENST00000550219 THEMISQ8N1K5 641 aaPredicted RBP20.86■□□□□ 0.93
NUP188-211ENST00000550219 ANKLE2Q86XL3 938 aa20.85■□□□□ 0.93
NUP188-211ENST00000550219 UBAP1LF5GYI3 381 aa20.84■□□□□ 0.93
NUP188-211ENST00000550219 DEPDC5O75140 1603 aa20.83■□□□□ 0.93
NUP188-211ENST00000550219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.83■□□□□ 0.93
NUP188-211ENST00000550219 CHIC2Q9UKJ5 165 aa20.83■□□□□ 0.93
NUP188-211ENST00000550219 NPHP4O75161 1426 aaPredicted RBP20.83■□□□□ 0.93
NUP188-211ENST00000550219 IQGAP1P46940 1657 aa20.82■□□□□ 0.92
NUP188-211ENST00000550219 CPS1P31327 1500 aa20.81■□□□□ 0.92
NUP188-211ENST00000550219 ANKRD30AQ9BXX3 1397 aa20.81■□□□□ 0.92
NUP188-211ENST00000550219 DISP3Q9P2K9 1392 aa20.81■□□□□ 0.92
NUP188-211ENST00000550219 UBR1Q8IWV7 1749 aa20.8■□□□□ 0.92
NUP188-211ENST00000550219 CFAP65Q6ZU64 1925 aaKnown RBP20.8■□□□□ 0.92
NUP188-211ENST00000550219 VWDEQ8N2E2 1590 aa20.8■□□□□ 0.92
NUP188-211ENST00000550219 KANK1Q14678 1352 aa20.79■□□□□ 0.92
NUP188-211ENST00000550219 MED14O60244 1454 aa20.78■□□□□ 0.92
NUP188-211ENST00000550219 FAM50AQ14320 339 aaKnown RBP20.78■□□□□ 0.92
NUP188-211ENST00000550219 ARHGAP31Q2M1Z3 1444 aa20.76■□□□□ 0.91
NUP188-211ENST00000550219 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
NUP188-211ENST00000550219 PIK3C2BO00750 1634 aa20.74■□□□□ 0.91
NUP188-211ENST00000550219 ADGRL2O95490 1459 aa20.74■□□□□ 0.91
NUP188-211ENST00000550219 SCAF11Q99590 1463 aaKnown RBP20.73■□□□□ 0.91
NUP188-211ENST00000550219 LMTK2Q8IWU2 1503 aa20.71■□□□□ 0.91
NUP188-211ENST00000550219 EFCAB6Q5THR3 1501 aa20.7■□□□□ 0.9
NUP188-211ENST00000550219 PIP4K2BP78356 416 aa20.7■□□□□ 0.9
NUP188-211ENST00000550219 ARHGAP23Q9P227 1491 aa20.69■□□□□ 0.9
NUP188-211ENST00000550219 SLIT1O75093 1534 aa20.68■□□□□ 0.9
NUP188-211ENST00000550219 SYNMO15061 1565 aa20.68■□□□□ 0.9
NUP188-211ENST00000550219 STRCP1A6NGW2 1772 aa20.68■□□□□ 0.9
NUP188-211ENST00000550219 STAG3Q9UJ98 1225 aa20.68■□□□□ 0.9
NUP188-211ENST00000550219 ANKRD50Q9ULJ7 1429 aa20.66■□□□□ 0.9
NUP188-211ENST00000550219 TOM1O60784 492 aa20.65■□□□□ 0.9
NUP188-211ENST00000550219 LTKP29376 864 aa20.65■□□□□ 0.9
NUP188-211ENST00000550219 TXNDC2Q86VQ3 553 aa20.65■□□□□ 0.9
NUP188-211ENST00000550219 ILDR2Q71H61 639 aa20.64■□□□□ 0.89
NUP188-211ENST00000550219 LRRC7Q96NW7 1537 aa20.63■□□□□ 0.89
NUP188-211ENST00000550219 EID1Q9Y6B2 187 aa20.63■□□□□ 0.89
NUP188-211ENST00000550219 ADGRB3O60242 1522 aa20.63■□□□□ 0.89
NUP188-211ENST00000550219 TMEM2Q9UHN6 1383 aa20.62■□□□□ 0.89
NUP188-211ENST00000550219 KDM5AP29375 1690 aaKnown RBP20.61■□□□□ 0.89
NUP188-211ENST00000550219 NOS1P29475 1434 aa20.61■□□□□ 0.89
NUP188-211ENST00000550219 ALKQ9UM73 1620 aa20.6■□□□□ 0.89
NUP188-211ENST00000550219 HSPA1LP34931 641 aa20.6■□□□□ 0.89
NUP188-211ENST00000550219 UNC13BO14795 1591 aa20.59■□□□□ 0.89
NUP188-211ENST00000550219 TET3O43151 1660 aa20.59■□□□□ 0.89
NUP188-211ENST00000550219 IDI1Q13907 227 aa20.59■□□□□ 0.89
NUP188-211ENST00000550219 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.89
NUP188-211ENST00000550219 SENP3Q9H4L4 574 aaPredicted RBP20.58■□□□□ 0.89
NUP188-211ENST00000550219 RPRD2Q5VT52 1461 aaKnown RBP20.56■□□□□ 0.88
NUP188-211ENST00000550219 ITGAEP38570 1179 aa20.56■□□□□ 0.88
NUP188-211ENST00000550219 GCC2Q8IWJ2 1684 aa20.56■□□□□ 0.88
NUP188-211ENST00000550219 MED1Q15648 1581 aaPredicted RBP20.54■□□□□ 0.88
NUP188-211ENST00000550219 ROCK1Q13464 1354 aa20.51■□□□□ 0.87
NUP188-211ENST00000550219 SLC52A1Q9NWF4 448 aa20.51■□□□□ 0.87
NUP188-211ENST00000550219 E9PCH4 1651 aa20.51■□□□□ 0.87
NUP188-211ENST00000550219 XIRP1Q702N8 1843 aaKnown RBP20.5■□□□□ 0.87
NUP188-211ENST00000550219 IQGAP3Q86VI3 1631 aa20.5■□□□□ 0.87
NUP188-211ENST00000550219 BCANQ96GW7 911 aa20.5■□□□□ 0.87
NUP188-211ENST00000550219 SLC26A8Q96RN1 970 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms