RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 ZMYM4Q5VZL5 1548 aa17.7■□□□□ 0.42
CACNB3-213ENST00000550064 COL17A1Q9UMD9 1497 aaPredicted RBP17.69■□□□□ 0.42
CACNB3-213ENST00000550064 FOXD1Q16676 465 aa17.69■□□□□ 0.42
CACNB3-213ENST00000550064 EIF2AK4Q9P2K8 1649 aaKnown RBP17.69■□□□□ 0.42
CACNB3-213ENST00000550064 DIP2CQ9Y2E4 1556 aa17.68■□□□□ 0.42
CACNB3-213ENST00000550064 MAGI2Q86UL8 1455 aa17.68■□□□□ 0.42
CACNB3-213ENST00000550064 YEATS2Q9ULM3 1422 aa17.67■□□□□ 0.42
CACNB3-213ENST00000550064 NEUROD1Q13562 356 aa17.67■□□□□ 0.42
CACNB3-213ENST00000550064 PKD2Q13563 968 aa17.67■□□□□ 0.42
CACNB3-213ENST00000550064 FAM135AQ9P2D6 1515 aa17.67■□□□□ 0.42
CACNB3-213ENST00000550064 IQGAP3Q86VI3 1631 aa17.66■□□□□ 0.42
CACNB3-213ENST00000550064 KIF3BO15066 747 aa17.66■□□□□ 0.42
CACNB3-213ENST00000550064 DEPDC5O75140 1603 aa17.65■□□□□ 0.42
CACNB3-213ENST00000550064 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
CACNB3-213ENST00000550064 ANKRD30BQ9BXX2 1392 aa17.65■□□□□ 0.42
CACNB3-213ENST00000550064 MROH1Q8NDA8 1641 aa17.61■□□□□ 0.41
CACNB3-213ENST00000550064 BCORL1Q5H9F3 1711 aa17.61■□□□□ 0.41
CACNB3-213ENST00000550064 KANK1Q14678 1352 aa17.6■□□□□ 0.41
CACNB3-213ENST00000550064 ATP10AO60312 1499 aa17.6■□□□□ 0.41
CACNB3-213ENST00000550064 RNF17Q9BXT8 1623 aaKnown RBP17.6■□□□□ 0.41
CACNB3-213ENST00000550064 VWDEQ8N2E2 1590 aa17.59■□□□□ 0.41
CACNB3-213ENST00000550064 PRDM15P57071 1507 aaPredicted RBP17.59■□□□□ 0.41
CACNB3-213ENST00000550064 TIMELESSQ9UNS1 1208 aa17.59■□□□□ 0.41
CACNB3-213ENST00000550064 REREQ9P2R6 1566 aa17.55■□□□□ 0.4
CACNB3-213ENST00000550064 GGT6Q6P531 493 aa17.55■□□□□ 0.4
CACNB3-213ENST00000550064 ARHGEF40Q8TER5 1519 aa17.55■□□□□ 0.4
CACNB3-213ENST00000550064 TET3O43151 1660 aa17.55■□□□□ 0.4
CACNB3-213ENST00000550064 TONSLQ96HA7 1378 aa17.54■□□□□ 0.4
CACNB3-213ENST00000550064 RPRD2Q5VT52 1461 aaKnown RBP17.54■□□□□ 0.4
CACNB3-213ENST00000550064 E9PCH4 1651 aa17.53■□□□□ 0.4
CACNB3-213ENST00000550064 CEP152O94986 1710 aa17.52■□□□□ 0.39
CACNB3-213ENST00000550064 LMTK2Q8IWU2 1503 aa17.52■□□□□ 0.39
CACNB3-213ENST00000550064 AGLP35573 1532 aa17.51■□□□□ 0.39
CACNB3-213ENST00000550064 PLA2R1Q13018 1463 aa17.5■□□□□ 0.39
CACNB3-213ENST00000550064 SIGLEC1Q9BZZ2 1709 aa17.5■□□□□ 0.39
CACNB3-213ENST00000550064 PPP1R15AO75807 674 aaPredicted RBP17.49■□□□□ 0.39
CACNB3-213ENST00000550064 ABCC3O15438 1527 aa17.48■□□□□ 0.39
CACNB3-213ENST00000550064 WASHC2CQ9Y4E1 1318 aa17.47■□□□□ 0.39
CACNB3-213ENST00000550064 EFCAB6Q5THR3 1501 aa17.47■□□□□ 0.39
CACNB3-213ENST00000550064 L3MBTL2Q969R5 705 aa17.46■□□□□ 0.39
CACNB3-213ENST00000550064 CCDC144AA2RUR9 1427 aa17.45■□□□□ 0.38
CACNB3-213ENST00000550064 PTPRTO14522 1441 aa17.45■□□□□ 0.38
CACNB3-213ENST00000550064 SPHKAPQ2M3C7 1700 aa17.44■□□□□ 0.38
CACNB3-213ENST00000550064 ZC3H13Q5T200 1668 aaKnown RBP17.44■□□□□ 0.38
CACNB3-213ENST00000550064 CAMSAP1Q5T5Y3 1602 aa17.43■□□□□ 0.38
CACNB3-213ENST00000550064 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
CACNB3-213ENST00000550064 TRPM2O94759 1503 aa17.42■□□□□ 0.38
CACNB3-213ENST00000550064 NPATQ14207 1427 aa17.4■□□□□ 0.38
CACNB3-213ENST00000550064 MLECQ14165 292 aa17.4■□□□□ 0.38
CACNB3-213ENST00000550064 CFAP65Q6ZU64 1925 aaKnown RBP17.4■□□□□ 0.38
CACNB3-213ENST00000550064 ARHGAP31Q2M1Z3 1444 aa17.38■□□□□ 0.37
CACNB3-213ENST00000550064 CLTCL1P53675 1640 aa17.38■□□□□ 0.37
CACNB3-213ENST00000550064 ARID4BQ4LE39 1312 aaPredicted RBP17.38■□□□□ 0.37
CACNB3-213ENST00000550064 CLTCQ00610 1675 aaKnown RBP17.36■□□□□ 0.37
CACNB3-213ENST00000550064 NOS1P29475 1434 aa17.34■□□□□ 0.37
CACNB3-213ENST00000550064 RGL3Q3MIN7 710 aa17.34■□□□□ 0.37
CACNB3-213ENST00000550064 CNTLNQ9NXG0 1405 aa17.34■□□□□ 0.37
CACNB3-213ENST00000550064 UGGT1Q9NYU2 1555 aa17.33■□□□□ 0.37
CACNB3-213ENST00000550064 SPATA31E1Q6ZUB1 1445 aa17.33■□□□□ 0.36
CACNB3-213ENST00000550064 NBPF8Q3BBV2 869 aa17.33■□□□□ 0.36
CACNB3-213ENST00000550064 ZNF316A6NFI3 1004 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-213ENST00000550064 DCAF11Q8TEB1 546 aa17.32■□□□□ 0.36
CACNB3-213ENST00000550064 KIF1BO60333 1816 aa17.31■□□□□ 0.36
CACNB3-213ENST00000550064 PREX1Q8TCU6 1659 aa17.3■□□□□ 0.36
CACNB3-213ENST00000550064 ESF1Q9H501 851 aaKnown RBP17.3■□□□□ 0.36
CACNB3-213ENST00000550064 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
CACNB3-213ENST00000550064 SYNMO15061 1565 aa17.3■□□□□ 0.36
CACNB3-213ENST00000550064 UHRF1BP1Q6BDS2 1440 aa17.29■□□□□ 0.36
CACNB3-213ENST00000550064 NEURL4Q96JN8 1562 aa17.28■□□□□ 0.36
CACNB3-213ENST00000550064 FBXO31Q5XUX0 539 aaPredicted RBP17.28■□□□□ 0.36
CACNB3-213ENST00000550064 ZNF326Q5BKZ1 582 aaKnown RBP17.27■□□□□ 0.36
CACNB3-213ENST00000550064 PIK3C2BO00750 1634 aa17.27■□□□□ 0.36
CACNB3-213ENST00000550064 ERVK-7P63135 1459 aa17.26■□□□□ 0.35
CACNB3-213ENST00000550064 ZMYM3Q14202 1370 aa17.26■□□□□ 0.35
CACNB3-213ENST00000550064 MROH2AA6NES4 1674 aa17.25■□□□□ 0.35
CACNB3-213ENST00000550064 CHGAP10645 457 aaKnown RBP17.24■□□□□ 0.35
CACNB3-213ENST00000550064 SLC52A1Q9NWF4 448 aa17.24■□□□□ 0.35
CACNB3-213ENST00000550064 ADGRB3O60242 1522 aa17.23■□□□□ 0.35
CACNB3-213ENST00000550064 IDI1Q13907 227 aa17.23■□□□□ 0.35
CACNB3-213ENST00000550064 SPATA31D1Q6ZQQ2 1576 aa17.23■□□□□ 0.35
CACNB3-213ENST00000550064 PRAG1Q86YV5 1406 aa17.21■□□□□ 0.35
CACNB3-213ENST00000550064 FER1L4A9Z1Z3 1794 aa17.21■□□□□ 0.35
CACNB3-213ENST00000550064 STAC3Q96MF2 364 aa17.2■□□□□ 0.34
CACNB3-213ENST00000550064 RALGAPBQ86X10 1494 aa17.19■□□□□ 0.34
CACNB3-213ENST00000550064 IFT172Q9UG01 1749 aa17.19■□□□□ 0.34
CACNB3-213ENST00000550064 TRPM1Q7Z4N2 1603 aa17.18■□□□□ 0.34
CACNB3-213ENST00000550064 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-213ENST00000550064 MADDQ8WXG6 1647 aa17.17■□□□□ 0.34
CACNB3-213ENST00000550064 RPGRIP1LQ68CZ1 1315 aa17.17■□□□□ 0.34
CACNB3-213ENST00000550064 MYO5BQ9ULV0 1848 aa17.17■□□□□ 0.34
CACNB3-213ENST00000550064 HSPA5P11021 654 aaKnown RBP17.16■□□□□ 0.34
CACNB3-213ENST00000550064 EIF4G2P78344 907 aaKnown RBP eCLIP17.16■□□□□ 0.34
CACNB3-213ENST00000550064 TMEM131LA2VDJ0 1609 aa17.16■□□□□ 0.34
CACNB3-213ENST00000550064 C3P01024 1663 aa17.16■□□□□ 0.34
CACNB3-213ENST00000550064 PPLO60437 1756 aa17.15■□□□□ 0.34
CACNB3-213ENST00000550064 CEBPAP49715 358 aaPredicted RBP17.15■□□□□ 0.34
CACNB3-213ENST00000550064 MYOM2P54296 1465 aa17.15■□□□□ 0.34
CACNB3-213ENST00000550064 TNRQ92752 1358 aa17.15■□□□□ 0.34
CACNB3-213ENST00000550064 NBPF1Q3BBV0 1214 aa17.13■□□□□ 0.33
CACNB3-213ENST00000550064 ADGRF5Q8IZF2 1346 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms