RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 A2MP01023 1474 aa13.99□□□□□ -0.17
SMARCD1-207ENST00000549526 PREX2Q70Z35 1606 aa13.98□□□□□ -0.17
SMARCD1-207ENST00000549526 ZNF772Q68DY9 489 aaPredicted RBP13.98□□□□□ -0.17
SMARCD1-207ENST00000549526 XIRP1Q702N8 1843 aaKnown RBP13.97□□□□□ -0.17
SMARCD1-207ENST00000549526 FAM135AQ9P2D6 1515 aa13.97□□□□□ -0.17
SMARCD1-207ENST00000549526 HNRNPMP52272 730 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMARCD1-207ENST00000549526 UGGT1Q9NYU2 1555 aa13.96□□□□□ -0.17
SMARCD1-207ENST00000549526 RXRBP28702 533 aa13.96□□□□□ -0.17
SMARCD1-207ENST00000549526 MEX3CQ5U5Q3 659 aaKnown RBP13.96□□□□□ -0.17
SMARCD1-207ENST00000549526 ROBO1Q9Y6N7 1651 aa13.95□□□□□ -0.18
SMARCD1-207ENST00000549526 PLXNC1O60486 1568 aa13.95□□□□□ -0.18
SMARCD1-207ENST00000549526 ATP7AQ04656 1500 aa13.94□□□□□ -0.18
SMARCD1-207ENST00000549526 JCADQ9P266 1359 aa13.92□□□□□ -0.18
SMARCD1-207ENST00000549526 MIA2Q96PC5 1412 aa13.91□□□□□ -0.18
SMARCD1-207ENST00000549526 CDC42BPAQ5VT25 1732 aa13.91□□□□□ -0.18
SMARCD1-207ENST00000549526 ZRANB1Q9UGI0 708 aa13.91□□□□□ -0.18
SMARCD1-207ENST00000549526 NLRP1Q9C000 1473 aa13.91□□□□□ -0.18
SMARCD1-207ENST00000549526 FMN1Q68DA7 1419 aa13.9□□□□□ -0.18
SMARCD1-207ENST00000549526 PHLPP1O60346 1717 aa13.9□□□□□ -0.18
SMARCD1-207ENST00000549526 FOXD1Q16676 465 aa13.9□□□□□ -0.18
SMARCD1-207ENST00000549526 SYCP2Q9BX26 1530 aa13.9□□□□□ -0.19
SMARCD1-207ENST00000549526 PZPP20742 1482 aa13.89□□□□□ -0.19
SMARCD1-207ENST00000549526 WASHC2CQ9Y4E1 1318 aa13.89□□□□□ -0.19
SMARCD1-207ENST00000549526 ZC3H13Q5T200 1668 aaKnown RBP13.88□□□□□ -0.19
SMARCD1-207ENST00000549526 ADGBQ8N7X0 1667 aa13.88□□□□□ -0.19
SMARCD1-207ENST00000549526 INO80Q9ULG1 1556 aaPredicted RBP13.88□□□□□ -0.19
SMARCD1-207ENST00000549526 CHIC1Q5VXU3 224 aa13.87□□□□□ -0.19
SMARCD1-207ENST00000549526 LRRIQ1Q96JM4 1722 aa13.87□□□□□ -0.19
SMARCD1-207ENST00000549526 KDM5DQ9BY66 1539 aa13.86□□□□□ -0.19
SMARCD1-207ENST00000549526 SPATA31A6Q5VVP1 1343 aa13.86□□□□□ -0.19
SMARCD1-207ENST00000549526 NUTM2BA6NNL0 878 aaPredicted RBP13.85□□□□□ -0.19
SMARCD1-207ENST00000549526 NUTM2EB1AL46 878 aaPredicted RBP13.85□□□□□ -0.19
SMARCD1-207ENST00000549526 KIF3BO15066 747 aa13.85□□□□□ -0.19
SMARCD1-207ENST00000549526 NUTM2DQ5VT03 806 aaPredicted RBP13.85□□□□□ -0.19
SMARCD1-207ENST00000549526 NUTM2AQ8IVF1 878 aaPredicted RBP13.85□□□□□ -0.19
SMARCD1-207ENST00000549526 RBM33Q96EV2 1170 aaKnown RBP13.85□□□□□ -0.19
SMARCD1-207ENST00000549526 TMEM94Q12767 1356 aa13.84□□□□□ -0.19
SMARCD1-207ENST00000549526 LRP6O75581 1613 aa13.84□□□□□ -0.19
SMARCD1-207ENST00000549526 SLAIN2Q9P270 581 aa13.84□□□□□ -0.19
SMARCD1-207ENST00000549526 CDK12Q9NYV4 1490 aaPredicted RBP13.84□□□□□ -0.19
SMARCD1-207ENST00000549526 TXNDC2Q86VQ3 553 aa13.83□□□□□ -0.2
SMARCD1-207ENST00000549526 PROSER2Q86WR7 435 aaPredicted RBP13.83□□□□□ -0.2
SMARCD1-207ENST00000549526 LRRC9Q6ZRR7 1453 aa13.82□□□□□ -0.2
SMARCD1-207ENST00000549526 SETBP1Q9Y6X0 1596 aa13.82□□□□□ -0.2
SMARCD1-207ENST00000549526 SCAF11Q99590 1463 aaKnown RBP13.81□□□□□ -0.2
SMARCD1-207ENST00000549526 LTKP29376 864 aa13.81□□□□□ -0.2
SMARCD1-207ENST00000549526 DHX29Q7Z478 1369 aaKnown RBP13.8□□□□□ -0.2
SMARCD1-207ENST00000549526 KIAA1107Q9UPP5 1409 aa13.8□□□□□ -0.2
SMARCD1-207ENST00000549526 CFDP1Q9UEE9 299 aaPredicted RBP13.79□□□□□ -0.2
SMARCD1-207ENST00000549526 PLEKHH2Q8IVE3 1493 aa13.79□□□□□ -0.2
SMARCD1-207ENST00000549526 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
SMARCD1-207ENST00000549526 COL16A1Q07092 1604 aaPredicted RBP13.77□□□□□ -0.21
SMARCD1-207ENST00000549526 GPATCH8Q9UKJ3 1502 aaKnown RBP13.77□□□□□ -0.21
SMARCD1-207ENST00000549526 CFAP65Q6ZU64 1925 aaKnown RBP13.76□□□□□ -0.21
SMARCD1-207ENST00000549526 MSH6P52701 1360 aa13.76□□□□□ -0.21
SMARCD1-207ENST00000549526 AFF2P51816 1311 aa13.76□□□□□ -0.21
SMARCD1-207ENST00000549526 KCNA6P17658 529 aa13.76□□□□□ -0.21
SMARCD1-207ENST00000549526 UBR1Q8IWV7 1749 aa13.76□□□□□ -0.21
SMARCD1-207ENST00000549526 FGD6Q6ZV73 1430 aa13.75□□□□□ -0.21
SMARCD1-207ENST00000549526 RBM6P78332 1123 aaKnown RBP13.75□□□□□ -0.21
SMARCD1-207ENST00000549526 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
SMARCD1-207ENST00000549526 QTRT2Q9H974 415 aaKnown RBP13.75□□□□□ -0.21
SMARCD1-207ENST00000549526 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
SMARCD1-207ENST00000549526 RGS12O14924 1447 aa13.74□□□□□ -0.21
SMARCD1-207ENST00000549526 ARHGAP35Q9NRY4 1499 aa13.74□□□□□ -0.21
SMARCD1-207ENST00000549526 ATAD2Q6PL18 1390 aa13.73□□□□□ -0.21
SMARCD1-207ENST00000549526 UBTFP17480 764 aaKnown RBP13.73□□□□□ -0.21
SMARCD1-207ENST00000549526 SHPRHQ149N8 1683 aa13.72□□□□□ -0.21
SMARCD1-207ENST00000549526 CCDC18Q5T9S5 1454 aa13.72□□□□□ -0.21
SMARCD1-207ENST00000549526 RTEL1-TNFRSF6BF6WH68 1400 aa13.71□□□□□ -0.22
SMARCD1-207ENST00000549526 NGLY1Q96IV0 654 aa13.7□□□□□ -0.22
SMARCD1-207ENST00000549526 SLC26A8Q96RN1 970 aa13.7□□□□□ -0.22
SMARCD1-207ENST00000549526 SLIT1O75093 1534 aa13.69□□□□□ -0.22
SMARCD1-207ENST00000549526 PRDM15P57071 1507 aaPredicted RBP13.69□□□□□ -0.22
SMARCD1-207ENST00000549526 ZNF644Q9H582 1327 aaPredicted RBP13.69□□□□□ -0.22
SMARCD1-207ENST00000549526 ARHGAP23Q9P227 1491 aa13.69□□□□□ -0.22
SMARCD1-207ENST00000549526 CCNB3Q8WWL7 1395 aa13.69□□□□□ -0.22
SMARCD1-207ENST00000549526 NCOA2Q15596 1464 aa13.68□□□□□ -0.22
SMARCD1-207ENST00000549526 EEA1Q15075 1411 aa13.68□□□□□ -0.22
SMARCD1-207ENST00000549526 C8orf37Q96NL8 207 aa13.68□□□□□ -0.22
SMARCD1-207ENST00000549526 ERVK-7P63135 1459 aa13.67□□□□□ -0.22
SMARCD1-207ENST00000549526 TIAM1Q13009 1591 aa13.67□□□□□ -0.22
SMARCD1-207ENST00000549526 CCDC125Q86Z20 511 aa13.66□□□□□ -0.22
SMARCD1-207ENST00000549526 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
SMARCD1-207ENST00000549526 EP400Q96L91 3159 aa13.66□□□□□ -0.22
SMARCD1-207ENST00000549526 BCANQ96GW7 911 aa13.65□□□□□ -0.22
SMARCD1-207ENST00000549526 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
SMARCD1-207ENST00000549526 ABCC3O15438 1527 aa13.64□□□□□ -0.23
SMARCD1-207ENST00000549526 MBD5Q9P267 1494 aa13.64□□□□□ -0.23
SMARCD1-207ENST00000549526 C14orf37Q86TY3 774 aa13.64□□□□□ -0.23
SMARCD1-207ENST00000549526 NKTRP30414 1462 aaKnown RBP13.63□□□□□ -0.23
SMARCD1-207ENST00000549526 TMEM2Q9UHN6 1383 aa13.63□□□□□ -0.23
SMARCD1-207ENST00000549526 AHDC1Q5TGY3 1603 aaPredicted RBP13.63□□□□□ -0.23
SMARCD1-207ENST00000549526 IFFO2Q5TF58 517 aa13.62□□□□□ -0.23
SMARCD1-207ENST00000549526 KDM5AP29375 1690 aaKnown RBP13.62□□□□□ -0.23
SMARCD1-207ENST00000549526 TET3O43151 1660 aa13.6□□□□□ -0.23
SMARCD1-207ENST00000549526 ATF3P18847 181 aa13.6□□□□□ -0.23
SMARCD1-207ENST00000549526 LRP5O75197 1615 aa13.6□□□□□ -0.23
SMARCD1-207ENST00000549526 CADPS2Q86UW7 1296 aa13.59□□□□□ -0.23
SMARCD1-207ENST00000549526 DIP2AQ14689 1571 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms