RNA–Protein interactions for RNA: ENST00000549102.1

NR4A1-212, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-212ENST00000549102 KDM5DQ9BY66 1539 aa23.41■■□□□ 1.34
NR4A1-212ENST00000549102 RNF17Q9BXT8 1623 aaKnown RBP23.41■■□□□ 1.34
NR4A1-212ENST00000549102 DUOX2Q9NRD8 1548 aa23.4■■□□□ 1.34
NR4A1-212ENST00000549102 PTPRKQ15262 1439 aa23.39■■□□□ 1.33
NR4A1-212ENST00000549102 KIF15Q9NS87 1388 aa23.38■■□□□ 1.33
NR4A1-212ENST00000549102 WASHC2CQ9Y4E1 1318 aa23.36■■□□□ 1.33
NR4A1-212ENST00000549102 MYO3AQ8NEV4 1616 aa23.35■■□□□ 1.33
NR4A1-212ENST00000549102 FAM50AQ14320 339 aaKnown RBP23.35■■□□□ 1.33
NR4A1-212ENST00000549102 RRP7BPQ9NSQ0 103 aa23.34■■□□□ 1.33
NR4A1-212ENST00000549102 ZC3H13Q5T200 1668 aaKnown RBP23.33■■□□□ 1.33
NR4A1-212ENST00000549102 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.32
NR4A1-212ENST00000549102 ERBINQ96RT1 1412 aa23.33■■□□□ 1.32
NR4A1-212ENST00000549102 STRCQ7RTU9 1775 aa23.32■■□□□ 1.32
NR4A1-212ENST00000549102 ANKRD30AQ9BXX3 1397 aa23.32■■□□□ 1.32
NR4A1-212ENST00000549102 CHIC2Q9UKJ5 165 aa23.32■■□□□ 1.32
NR4A1-212ENST00000549102 ZNF142P52746 1687 aaPredicted RBP23.32■■□□□ 1.32
NR4A1-212ENST00000549102 PZPP20742 1482 aa23.31■■□□□ 1.32
NR4A1-212ENST00000549102 ABCC3O15438 1527 aa23.3■■□□□ 1.32
NR4A1-212ENST00000549102 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
NR4A1-212ENST00000549102 CEP170BQ9Y4F5 1589 aaPredicted RBP23.28■■□□□ 1.32
NR4A1-212ENST00000549102 NCOA1Q15788 1441 aa23.28■■□□□ 1.32
NR4A1-212ENST00000549102 ADGRL2O95490 1459 aa23.28■■□□□ 1.32
NR4A1-212ENST00000549102 CEP152O94986 1710 aa23.28■■□□□ 1.32
NR4A1-212ENST00000549102 FBXO31Q5XUX0 539 aaPredicted RBP23.26■■□□□ 1.31
NR4A1-212ENST00000549102 PRDM15P57071 1507 aaPredicted RBP23.26■■□□□ 1.31
NR4A1-212ENST00000549102 DEPDC5O75140 1603 aa23.25■■□□□ 1.31
NR4A1-212ENST00000549102 CAMSAP1Q5T5Y3 1602 aa23.25■■□□□ 1.31
NR4A1-212ENST00000549102 TNRQ92752 1358 aa23.25■■□□□ 1.31
NR4A1-212ENST00000549102 DMRT2Q9Y5R5 561 aa23.23■■□□□ 1.31
NR4A1-212ENST00000549102 A2ML1A8K2U0 1454 aa23.22■■□□□ 1.31
NR4A1-212ENST00000549102 PLA2R1Q13018 1463 aa23.18■■□□□ 1.3
NR4A1-212ENST00000549102 PTPRTO14522 1441 aa23.18■■□□□ 1.3
NR4A1-212ENST00000549102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.18■■□□□ 1.3
NR4A1-212ENST00000549102 SPATA31D1Q6ZQQ2 1576 aa23.18■■□□□ 1.3
NR4A1-212ENST00000549102 CFAP65Q6ZU64 1925 aaKnown RBP23.18■■□□□ 1.3
NR4A1-212ENST00000549102 KANK1Q14678 1352 aa23.17■■□□□ 1.3
NR4A1-212ENST00000549102 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.16■■□□□ 1.3
NR4A1-212ENST00000549102 ILDR1Q86SU0 546 aaPredicted RBP23.16■■□□□ 1.3
NR4A1-212ENST00000549102 ERVK-7P63135 1459 aa23.16■■□□□ 1.3
NR4A1-212ENST00000549102 NLRP1Q9C000 1473 aa23.16■■□□□ 1.3
NR4A1-212ENST00000549102 ANKRD50Q9ULJ7 1429 aa23.16■■□□□ 1.3
NR4A1-212ENST00000549102 ARHGAP31Q2M1Z3 1444 aa23.14■■□□□ 1.29
NR4A1-212ENST00000549102 VWDEQ8N2E2 1590 aa23.14■■□□□ 1.29
NR4A1-212ENST00000549102 ROCK1Q13464 1354 aa23.13■■□□□ 1.29
NR4A1-212ENST00000549102 NCKAP5LQ9HCH0 1330 aa23.12■■□□□ 1.29
NR4A1-212ENST00000549102 LMTK2Q8IWU2 1503 aa23.12■■□□□ 1.29
NR4A1-212ENST00000549102 PKD2Q13563 968 aa23.11■■□□□ 1.29
NR4A1-212ENST00000549102 ITGAEP38570 1179 aa23.1■■□□□ 1.29
NR4A1-212ENST00000549102 UGGT1Q9NYU2 1555 aa23.1■■□□□ 1.29
NR4A1-212ENST00000549102 RRBP1Q9P2E9 1410 aaKnown RBP23.09■■□□□ 1.29
NR4A1-212ENST00000549102 POLR1AO95602 1720 aaPredicted RBP23.08■■□□□ 1.28
NR4A1-212ENST00000549102 THEMISQ8N1K5 641 aaPredicted RBP23.06■■□□□ 1.28
NR4A1-212ENST00000549102 EFCAB6Q5THR3 1501 aa23.05■■□□□ 1.28
NR4A1-212ENST00000549102 CERKQ8TCT0 537 aa23.05■■□□□ 1.28
NR4A1-212ENST00000549102 FBXO41Q8TF61 875 aa23.05■■□□□ 1.28
NR4A1-212ENST00000549102 UNC13BO14795 1591 aa23.05■■□□□ 1.28
NR4A1-212ENST00000549102 UBR1Q8IWV7 1749 aa23.02■■□□□ 1.28
NR4A1-212ENST00000549102 NEURL4Q96JN8 1562 aa23.01■■□□□ 1.27
NR4A1-212ENST00000549102 TET3O43151 1660 aa23■■□□□ 1.27
NR4A1-212ENST00000549102 ANKLE2Q86XL3 938 aa22.99■■□□□ 1.27
NR4A1-212ENST00000549102 LTBP4Q8N2S1 1624 aa22.99■■□□□ 1.27
NR4A1-212ENST00000549102 GCC2Q8IWJ2 1684 aa22.98■■□□□ 1.27
NR4A1-212ENST00000549102 SYNMO15061 1565 aa22.97■■□□□ 1.27
NR4A1-212ENST00000549102 PIK3C2BO00750 1634 aa22.97■■□□□ 1.27
NR4A1-212ENST00000549102 RPRD2Q5VT52 1461 aaKnown RBP22.97■■□□□ 1.27
NR4A1-212ENST00000549102 NOS1P29475 1434 aa22.96■■□□□ 1.27
NR4A1-212ENST00000549102 IQGAP3Q86VI3 1631 aa22.96■■□□□ 1.27
NR4A1-212ENST00000549102 ZNF335Q9H4Z2 1342 aaPredicted RBP22.94■■□□□ 1.26
NR4A1-212ENST00000549102 MED14O60244 1454 aa22.93■■□□□ 1.26
NR4A1-212ENST00000549102 KDM5AP29375 1690 aaKnown RBP22.93■■□□□ 1.26
NR4A1-212ENST00000549102 NPHP4O75161 1426 aaPredicted RBP22.92■■□□□ 1.26
NR4A1-212ENST00000549102 IQGAP1P46940 1657 aa22.92■■□□□ 1.26
NR4A1-212ENST00000549102 E9PCH4 1651 aa22.91■■□□□ 1.26
NR4A1-212ENST00000549102 SLIT1O75093 1534 aa22.91■■□□□ 1.26
NR4A1-212ENST00000549102 NUP155O75694 1391 aa22.9■■□□□ 1.26
NR4A1-212ENST00000549102 IDI1Q13907 227 aa22.9■■□□□ 1.26
NR4A1-212ENST00000549102 STAG3Q9UJ98 1225 aa22.9■■□□□ 1.26
NR4A1-212ENST00000549102 ARHGAP23Q9P227 1491 aa22.9■■□□□ 1.26
NR4A1-212ENST00000549102 SCAF11Q99590 1463 aaKnown RBP22.88■■□□□ 1.25
NR4A1-212ENST00000549102 NAIPQ13075 1403 aa22.88■■□□□ 1.25
NR4A1-212ENST00000549102 IQSEC2Q5JU85 1478 aa22.87■■□□□ 1.25
NR4A1-212ENST00000549102 SLC52A1Q9NWF4 448 aa22.87■■□□□ 1.25
NR4A1-212ENST00000549102 ADGRB3O60242 1522 aa22.87■■□□□ 1.25
NR4A1-212ENST00000549102 TMEM2Q9UHN6 1383 aa22.85■■□□□ 1.25
NR4A1-212ENST00000549102 LTKP29376 864 aa22.84■■□□□ 1.25
NR4A1-212ENST00000549102 TXNDC2Q86VQ3 553 aa22.84■■□□□ 1.25
NR4A1-212ENST00000549102 HFM1A2PYH4 1435 aa22.83■■□□□ 1.25
NR4A1-212ENST00000549102 EID1Q9Y6B2 187 aa22.83■■□□□ 1.25
NR4A1-212ENST00000549102 MYO5BQ9ULV0 1848 aa22.81■■□□□ 1.24
NR4A1-212ENST00000549102 CPS1P31327 1500 aa22.8■■□□□ 1.24
NR4A1-212ENST00000549102 TMEM131LA2VDJ0 1609 aa22.78■■□□□ 1.24
NR4A1-212ENST00000549102 SPHKAPQ2M3C7 1700 aa22.76■■□□□ 1.23
NR4A1-212ENST00000549102 STRCP1A6NGW2 1772 aa22.75■■□□□ 1.23
NR4A1-212ENST00000549102 CHGAP10645 457 aaKnown RBP22.72■■□□□ 1.23
NR4A1-212ENST00000549102 ZFYVE9O95405 1425 aa22.72■■□□□ 1.23
NR4A1-212ENST00000549102 TRIM52Q96A61 297 aa22.71■■□□□ 1.23
NR4A1-212ENST00000549102 RIMS2Q9UQ26 1411 aa22.7■■□□□ 1.22
NR4A1-212ENST00000549102 UBAP1LF5GYI3 381 aa22.68■■□□□ 1.22
NR4A1-212ENST00000549102 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
NR4A1-212ENST00000549102 TRPM2O94759 1503 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms