RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 RNF123Q5XPI4 1314 aa16.43■□□□□ 0.22
SLC38A1-206ENST00000549049 PDE4AP27815 886 aa16.43■□□□□ 0.22
SLC38A1-206ENST00000549049 CRBNQ96SW2 442 aa16.43■□□□□ 0.22
SLC38A1-206ENST00000549049 CARMIL2Q6F5E8 1435 aa16.43■□□□□ 0.22
SLC38A1-206ENST00000549049 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
SLC38A1-206ENST00000549049 SLC4A3P48751 1232 aa16.41■□□□□ 0.22
SLC38A1-206ENST00000549049 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
SLC38A1-206ENST00000549049 BRD4O60885 1362 aaPredicted RBP16.41■□□□□ 0.22
SLC38A1-206ENST00000549049 C20orf194Q5TEA3 1177 aa16.4■□□□□ 0.22
SLC38A1-206ENST00000549049 ARID4BQ4LE39 1312 aaPredicted RBP16.4■□□□□ 0.22
SLC38A1-206ENST00000549049 MBD5Q9P267 1494 aa16.4■□□□□ 0.22
SLC38A1-206ENST00000549049 RTN4Q9NQC3 1192 aaKnown RBP16.4■□□□□ 0.22
SLC38A1-206ENST00000549049 CCDC144AA2RUR9 1427 aa16.38■□□□□ 0.21
SLC38A1-206ENST00000549049 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
SLC38A1-206ENST00000549049 NEFMP07197 916 aa16.37■□□□□ 0.21
SLC38A1-206ENST00000549049 KDM5CP41229 1560 aa16.37■□□□□ 0.21
SLC38A1-206ENST00000549049 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
SLC38A1-206ENST00000549049 RALGAPBQ86X10 1494 aa16.36■□□□□ 0.21
SLC38A1-206ENST00000549049 DISP3Q9P2K9 1392 aa16.36■□□□□ 0.21
SLC38A1-206ENST00000549049 PER1O15534 1290 aaPredicted RBP16.36■□□□□ 0.21
SLC38A1-206ENST00000549049 ATP10BO94823 1461 aa16.36■□□□□ 0.21
SLC38A1-206ENST00000549049 LRPPRCP42704 1394 aaKnown RBP16.35■□□□□ 0.21
SLC38A1-206ENST00000549049 TCERG1O14776 1098 aaKnown RBP16.34■□□□□ 0.21
SLC38A1-206ENST00000549049 TMF1P82094 1093 aa16.34■□□□□ 0.21
SLC38A1-206ENST00000549049 RGS3P49796 1198 aa16.34■□□□□ 0.21
SLC38A1-206ENST00000549049 WDR43Q15061 677 aaKnown RBP eCLIP16.34■□□□□ 0.21
SLC38A1-206ENST00000549049 MAGI1Q96QZ7 1491 aaPredicted RBP16.34■□□□□ 0.21
SLC38A1-206ENST00000549049 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.21
SLC38A1-206ENST00000549049 KNSTRNQ9Y448 316 aa16.33■□□□□ 0.2
SLC38A1-206ENST00000549049 PTPRGP23470 1445 aa16.32■□□□□ 0.2
SLC38A1-206ENST00000549049 ADGRL2O95490 1459 aa16.31■□□□□ 0.2
SLC38A1-206ENST00000549049 UHRF1BP1Q6BDS2 1440 aa16.31■□□□□ 0.2
SLC38A1-206ENST00000549049 TESK2Q96S53 571 aa16.31■□□□□ 0.2
SLC38A1-206ENST00000549049 BACH2Q9BYV9 841 aa16.31■□□□□ 0.2
SLC38A1-206ENST00000549049 EIF4G3O43432 1585 aaKnown RBP16.31■□□□□ 0.2
SLC38A1-206ENST00000549049 CEP170Q5SW79 1584 aa16.31■□□□□ 0.2
SLC38A1-206ENST00000549049 PDE3BQ13370 1112 aa16.29■□□□□ 0.2
SLC38A1-206ENST00000549049 DAXXQ9UER7 740 aaPredicted RBP16.28■□□□□ 0.2
SLC38A1-206ENST00000549049 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
SLC38A1-206ENST00000549049 PARD3Q8TEW0 1356 aa16.28■□□□□ 0.2
SLC38A1-206ENST00000549049 TNNT2P45379 298 aaPredicted RBP16.27■□□□□ 0.2
SLC38A1-206ENST00000549049 NEUROD2Q15784 382 aa16.27■□□□□ 0.19
SLC38A1-206ENST00000549049 IL27Q8NEV9 243 aa16.27■□□□□ 0.19
SLC38A1-206ENST00000549049 PRAG1Q86YV5 1406 aa16.26■□□□□ 0.19
SLC38A1-206ENST00000549049 ITSN2Q9NZM3 1697 aa16.26■□□□□ 0.19
SLC38A1-206ENST00000549049 PLEKHH2Q8IVE3 1493 aa16.25■□□□□ 0.19
SLC38A1-206ENST00000549049 PPP2R1AP30153 589 aa16.24■□□□□ 0.19
SLC38A1-206ENST00000549049 ABCC10Q5T3U5 1492 aa16.24■□□□□ 0.19
SLC38A1-206ENST00000549049 ADGBQ8N7X0 1667 aa16.23■□□□□ 0.19
SLC38A1-206ENST00000549049 FAM135AQ9P2D6 1515 aa16.23■□□□□ 0.19
SLC38A1-206ENST00000549049 ERBINQ96RT1 1412 aa16.23■□□□□ 0.19
SLC38A1-206ENST00000549049 POLR1AO95602 1720 aaPredicted RBP16.23■□□□□ 0.19
SLC38A1-206ENST00000549049 APAF1O14727 1248 aa16.22■□□□□ 0.19
SLC38A1-206ENST00000549049 CHGAP10645 457 aaKnown RBP16.22■□□□□ 0.19
SLC38A1-206ENST00000549049 AFAP1Q8N556 730 aa16.22■□□□□ 0.19
SLC38A1-206ENST00000549049 A2MP01023 1474 aa16.2■□□□□ 0.18
SLC38A1-206ENST00000549049 GOLGA2Q08379 1002 aa16.2■□□□□ 0.18
SLC38A1-206ENST00000549049 PLA2R1Q13018 1463 aa16.2■□□□□ 0.18
SLC38A1-206ENST00000549049 CCDC141Q6ZP82 1450 aa16.2■□□□□ 0.18
SLC38A1-206ENST00000549049 BCAR3O75815 825 aa16.2■□□□□ 0.18
SLC38A1-206ENST00000549049 PLEKHH1Q9ULM0 1364 aa16.19■□□□□ 0.18
SLC38A1-206ENST00000549049 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
SLC38A1-206ENST00000549049 ARHGAP5Q13017 1502 aa16.19■□□□□ 0.18
SLC38A1-206ENST00000549049 ARHGEF12Q9NZN5 1544 aa16.19■□□□□ 0.18
SLC38A1-206ENST00000549049 CDC42BPAQ5VT25 1732 aa16.19■□□□□ 0.18
SLC38A1-206ENST00000549049 MS4A1P11836 297 aa16.18■□□□□ 0.18
SLC38A1-206ENST00000549049 RSPH4AQ5TD94 716 aa16.18■□□□□ 0.18
SLC38A1-206ENST00000549049 DUSP27Q5VZP5 1158 aa16.18■□□□□ 0.18
SLC38A1-206ENST00000549049 CANXP27824 592 aaKnown RBP16.18■□□□□ 0.18
SLC38A1-206ENST00000549049 RRP7AQ9Y3A4 280 aaKnown RBP16.18■□□□□ 0.18
SLC38A1-206ENST00000549049 SYCP2Q9BX26 1530 aa16.17■□□□□ 0.18
SLC38A1-206ENST00000549049 FRAT1Q92837 279 aaPredicted RBP16.16■□□□□ 0.18
SLC38A1-206ENST00000549049 NUP160Q12769 1436 aa16.15■□□□□ 0.18
SLC38A1-206ENST00000549049 CFAP70Q5T0N1 1121 aa16.15■□□□□ 0.18
SLC38A1-206ENST00000549049 CROCC2H7BZ55 1655 aa16.15■□□□□ 0.18
SLC38A1-206ENST00000549049 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
SLC38A1-206ENST00000549049 KDM5DQ9BY66 1539 aa16.14■□□□□ 0.17
SLC38A1-206ENST00000549049 SHANK2Q9UPX8 1470 aa16.14■□□□□ 0.17
SLC38A1-206ENST00000549049 AMER1Q5JTC6 1135 aaPredicted RBP16.14■□□□□ 0.17
SLC38A1-206ENST00000549049 COL17A1Q9UMD9 1497 aaPredicted RBP16.13■□□□□ 0.17
SLC38A1-206ENST00000549049 EFCAB2Q5VUJ9 269 aa16.13■□□□□ 0.17
SLC38A1-206ENST00000549049 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.13■□□□□ 0.17
SLC38A1-206ENST00000549049 BCL2L13Q9BXK5 485 aa16.13■□□□□ 0.17
SLC38A1-206ENST00000549049 KIF3BO15066 747 aa16.12■□□□□ 0.17
SLC38A1-206ENST00000549049 PPM1GO15355 546 aaPredicted RBP16.12■□□□□ 0.17
SLC38A1-206ENST00000549049 ABCA8O94911 1581 aa16.12■□□□□ 0.17
SLC38A1-206ENST00000549049 SAMD9LQ8IVG5 1584 aa16.11■□□□□ 0.17
SLC38A1-206ENST00000549049 PANK1Q8TE04 598 aa16.11■□□□□ 0.17
SLC38A1-206ENST00000549049 DDRGK1Q96HY6 314 aa16.11■□□□□ 0.17
SLC38A1-206ENST00000549049 COG6Q9Y2V7 657 aa16.11■□□□□ 0.17
SLC38A1-206ENST00000549049 SPAG9O60271 1321 aaKnown RBP16.11■□□□□ 0.17
SLC38A1-206ENST00000549049 WASHC2CQ9Y4E1 1318 aa16.11■□□□□ 0.17
SLC38A1-206ENST00000549049 NFKBIBQ15653 356 aa16.1■□□□□ 0.17
SLC38A1-206ENST00000549049 NUTM2DQ5VT03 806 aaPredicted RBP16.1■□□□□ 0.17
SLC38A1-206ENST00000549049 CENPQQ7L2Z9 268 aaPredicted RBP16.1■□□□□ 0.17
SLC38A1-206ENST00000549049 MAGI2Q86UL8 1455 aa16.1■□□□□ 0.17
SLC38A1-206ENST00000549049 ANO8Q9HCE9 1232 aaPredicted RBP16.1■□□□□ 0.17
SLC38A1-206ENST00000549049 BRPF3Q9ULD4 1205 aa16.09■□□□□ 0.17
SLC38A1-206ENST00000549049 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
SLC38A1-206ENST00000549049 SLFN5Q08AF3 891 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms