RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ALKQ9UM73 1620 aa31.3■■■□□ 2.6
CTDSP2-204ENST00000548823 TNRQ92752 1358 aa31.3■■■□□ 2.6
CTDSP2-204ENST00000548823 ANKLE2Q86XL3 938 aa31.3■■■□□ 2.6
CTDSP2-204ENST00000548823 VWDEQ8N2E2 1590 aa31.29■■■□□ 2.6
CTDSP2-204ENST00000548823 FYCO1Q9BQS8 1478 aa31.28■■■□□ 2.6
CTDSP2-204ENST00000548823 FBXO31Q5XUX0 539 aaPredicted RBP31.25■■■□□ 2.59
CTDSP2-204ENST00000548823 CCNB3Q8WWL7 1395 aa31.24■■■□□ 2.59
CTDSP2-204ENST00000548823 THEMISQ8N1K5 641 aaPredicted RBP31.23■■■□□ 2.59
CTDSP2-204ENST00000548823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.23■■■□□ 2.596e-9■■■■■ 82.2
CTDSP2-204ENST00000548823 MED14O60244 1454 aa31.21■■■□□ 2.59
CTDSP2-204ENST00000548823 PZPP20742 1482 aa31.21■■■□□ 2.59
CTDSP2-204ENST00000548823 CEP162Q5TB80 1403 aa31.21■■■□□ 2.59
CTDSP2-204ENST00000548823 NPHP4O75161 1426 aaPredicted RBP31.2■■■□□ 2.58
CTDSP2-204ENST00000548823 DHX29Q7Z478 1369 aaKnown RBP31.19■■■□□ 2.58
CTDSP2-204ENST00000548823 DEPDC5O75140 1603 aa31.19■■■□□ 2.58
CTDSP2-204ENST00000548823 RTEL1-TNFRSF6BF6WH68 1400 aa31.18■■■□□ 2.58
CTDSP2-204ENST00000548823 FAM135AQ9P2D6 1515 aa31.17■■■□□ 2.58
CTDSP2-204ENST00000548823 NLRP1Q9C000 1473 aa31.15■■■□□ 2.58
CTDSP2-204ENST00000548823 KDM5DQ9BY66 1539 aa31.14■■■□□ 2.58
CTDSP2-204ENST00000548823 MIA2Q96PC5 1412 aa31.14■■■□□ 2.58
CTDSP2-204ENST00000548823 UGGT1Q9NYU2 1555 aa31.14■■■□□ 2.58
CTDSP2-204ENST00000548823 MBD5Q9P267 1494 aa31.13■■■□□ 2.57
CTDSP2-204ENST00000548823 KIF3BO15066 747 aa31.13■■■□□ 2.57
CTDSP2-204ENST00000548823 SENP3Q9H4L4 574 aaPredicted RBP31.13■■■□□ 2.57
CTDSP2-204ENST00000548823 LRRC7Q96NW7 1537 aa31.12■■■□□ 2.57
CTDSP2-204ENST00000548823 ZNF644Q9H582 1327 aaPredicted RBP31.11■■■□□ 2.57
CTDSP2-204ENST00000548823 RGS17Q9UGC6 210 aaPredicted RBP31.11■■■□□ 2.57
CTDSP2-204ENST00000548823 IQGAP1P46940 1657 aa31.11■■■□□ 2.57
CTDSP2-204ENST00000548823 WASHC2CQ9Y4E1 1318 aa31.1■■■□□ 2.57
CTDSP2-204ENST00000548823 RNF17Q9BXT8 1623 aaKnown RBP31.1■■■□□ 2.57
CTDSP2-204ENST00000548823 STRCP1A6NGW2 1772 aa31.09■■■□□ 2.57
CTDSP2-204ENST00000548823 SYNMO15061 1565 aa31.06■■■□□ 2.56
CTDSP2-204ENST00000548823 MTUS2Q5JR59 1369 aa31.06■■■□□ 2.56
CTDSP2-204ENST00000548823 TIAM1Q13009 1591 aa31.02■■■□□ 2.56
CTDSP2-204ENST00000548823 CCDC141Q6ZP82 1450 aa30.93■■■□□ 2.54
CTDSP2-204ENST00000548823 RSPH4AQ5TD94 716 aa30.92■■■□□ 2.54
CTDSP2-204ENST00000548823 ZC3H13Q5T200 1668 aaKnown RBP30.91■■■□□ 2.54
CTDSP2-204ENST00000548823 POTEAQ6S8J7 498 aa30.89■■■□□ 2.54
CTDSP2-204ENST00000548823 EHBP1L1Q8N3D4 1523 aa30.88■■■□□ 2.53
CTDSP2-204ENST00000548823 TRIM26Q12899 539 aaPredicted RBP30.86■■■□□ 2.53
CTDSP2-204ENST00000548823 FAM135BQ49AJ0 1406 aa30.84■■■□□ 2.53
CTDSP2-204ENST00000548823 XIRP1Q702N8 1843 aaKnown RBP30.84■■■□□ 2.53
CTDSP2-204ENST00000548823 SCAF11Q99590 1463 aaKnown RBP30.83■■■□□ 2.53
CTDSP2-204ENST00000548823 ERVK-7P63135 1459 aa30.82■■■□□ 2.52
CTDSP2-204ENST00000548823 CAMSAP2Q08AD1 1489 aa30.82■■■□□ 2.52
CTDSP2-204ENST00000548823 ABCC3O15438 1527 aa30.82■■■□□ 2.52
CTDSP2-204ENST00000548823 UBR1Q8IWV7 1749 aa30.8■■■□□ 2.52
CTDSP2-204ENST00000548823 TSPY4P0CV99 314 aa30.78■■■□□ 2.52
CTDSP2-204ENST00000548823 TSPY10P0CW01 314 aa30.78■■■□□ 2.52
CTDSP2-204ENST00000548823 LTKP29376 864 aa30.76■■■□□ 2.51
CTDSP2-204ENST00000548823 TXNDC2Q86VQ3 553 aa30.76■■■□□ 2.51
CTDSP2-204ENST00000548823 PCGF6Q9BYE7 350 aa30.75■■■□□ 2.51
CTDSP2-204ENST00000548823 NCOA2Q15596 1464 aa30.75■■■□□ 2.51
CTDSP2-204ENST00000548823 ARHGAP23Q9P227 1491 aa30.75■■■□□ 2.51
CTDSP2-204ENST00000548823 ARHGEF5Q12774 1597 aa30.75■■■□□ 2.51
CTDSP2-204ENST00000548823 VPS8Q8N3P4 1428 aa30.74■■■□□ 2.51
CTDSP2-204ENST00000548823 SLIT1O75093 1534 aa30.73■■■□□ 2.51
CTDSP2-204ENST00000548823 CFAP65Q6ZU64 1925 aaKnown RBP30.72■■■□□ 2.51
CTDSP2-204ENST00000548823 EID1Q9Y6B2 187 aa30.68■■■□□ 2.5
CTDSP2-204ENST00000548823 EIF2AK4Q9P2K8 1649 aaKnown RBP30.67■■■□□ 2.5
CTDSP2-204ENST00000548823 ROBO1Q9Y6N7 1651 aa30.66■■■□□ 2.5
CTDSP2-204ENST00000548823 TMEM94Q12767 1356 aa30.65■■■□□ 2.5
CTDSP2-204ENST00000548823 SETD1AO15047 1707 aaKnown RBP30.65■■■□□ 2.5
CTDSP2-204ENST00000548823 MROH1Q8NDA8 1641 aa30.64■■■□□ 2.5
CTDSP2-204ENST00000548823 CEP152O94986 1710 aa30.64■■■□□ 2.49
CTDSP2-204ENST00000548823 MAST1Q9Y2H9 1570 aa30.62■■■□□ 2.49
CTDSP2-204ENST00000548823 KCNA6P17658 529 aa30.59■■■□□ 2.49
CTDSP2-204ENST00000548823 LRRC9Q6ZRR7 1453 aa30.59■■■□□ 2.49
CTDSP2-204ENST00000548823 ARHGAP31Q2M1Z3 1444 aa30.57■■■□□ 2.48
CTDSP2-204ENST00000548823 TMEM2Q9UHN6 1383 aa30.57■■■□□ 2.48
CTDSP2-204ENST00000548823 MAP3K1Q13233 1512 aa30.56■■■□□ 2.48
CTDSP2-204ENST00000548823 PROSER2Q86WR7 435 aaPredicted RBP30.55■■■□□ 2.48
CTDSP2-204ENST00000548823 JCADQ9P266 1359 aa30.52■■■□□ 2.48
CTDSP2-204ENST00000548823 PIK3C2BO00750 1634 aa30.51■■■□□ 2.48
CTDSP2-204ENST00000548823 PHLPP1O60346 1717 aa30.5■■■□□ 2.47
CTDSP2-204ENST00000548823 STAG3Q9UJ98 1225 aa30.5■■■□□ 2.47
CTDSP2-204ENST00000548823 PRDM15P57071 1507 aaPredicted RBP30.49■■■□□ 2.47
CTDSP2-204ENST00000548823 UPF1Q92900 1129 aaKnown RBP eCLIP30.49■■■□□ 2.473e-19■■■■■ 40.9
CTDSP2-204ENST00000548823 RBM33Q96EV2 1170 aaKnown RBP30.49■■■□□ 2.47
CTDSP2-204ENST00000548823 DUOX2Q9NRD8 1548 aa30.48■■■□□ 2.47
CTDSP2-204ENST00000548823 TET3O43151 1660 aa30.47■■■□□ 2.47
CTDSP2-204ENST00000548823 KDM5AP29375 1690 aaKnown RBP30.46■■■□□ 2.47
CTDSP2-204ENST00000548823 SLC26A8Q96RN1 970 aa30.46■■■□□ 2.47
CTDSP2-204ENST00000548823 SLAIN2Q9P270 581 aa30.46■■■□□ 2.47
CTDSP2-204ENST00000548823 MSH6P52701 1360 aa30.46■■■□□ 2.47
CTDSP2-204ENST00000548823 NKTRP30414 1462 aaKnown RBP30.45■■■□□ 2.47
CTDSP2-204ENST00000548823 EFCAB6Q5THR3 1501 aa30.44■■■□□ 2.46
CTDSP2-204ENST00000548823 NWD1Q149M9 1564 aa30.42■■■□□ 2.46
CTDSP2-204ENST00000548823 ZNF772Q68DY9 489 aaPredicted RBP30.4■■■□□ 2.46
CTDSP2-204ENST00000548823 IDI1Q13907 227 aa30.39■■■□□ 2.45
CTDSP2-204ENST00000548823 SPATA31A6Q5VVP1 1343 aa30.37■■■□□ 2.45
CTDSP2-204ENST00000548823 COL16A1Q07092 1604 aaPredicted RBP30.37■■■□□ 2.45
CTDSP2-204ENST00000548823 APLP2Q06481 763 aa30.35■■■□□ 2.45
CTDSP2-204ENST00000548823 TRIM52Q96A61 297 aa30.35■■■□□ 2.45
CTDSP2-204ENST00000548823 ERBINQ96RT1 1412 aa30.35■■■□□ 2.45
CTDSP2-204ENST00000548823 MYOM3Q5VTT5 1437 aa30.34■■■□□ 2.45
CTDSP2-204ENST00000548823 FGD6Q6ZV73 1430 aa30.34■■■□□ 2.45
CTDSP2-204ENST00000548823 MEX3CQ5U5Q3 659 aaKnown RBP30.34■■■□□ 2.45
CTDSP2-204ENST00000548823 PPARGC1BQ86YN6 1023 aaKnown RBP30.34■■■□□ 2.45
CTDSP2-204ENST00000548823 LRP6O75581 1613 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms