RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
TROAP-208ENST00000548817 KIAA1107Q9UPP5 1409 aa13.95□□□□□ -0.18
TROAP-208ENST00000548817 TNRQ92752 1358 aa13.95□□□□□ -0.18
TROAP-208ENST00000548817 LRRC7Q96NW7 1537 aa13.95□□□□□ -0.18
TROAP-208ENST00000548817 GGT6Q6P531 493 aa13.94□□□□□ -0.18
TROAP-208ENST00000548817 THEMISQ8N1K5 641 aaPredicted RBP13.93□□□□□ -0.18
TROAP-208ENST00000548817 IQGAP1P46940 1657 aa13.93□□□□□ -0.18
TROAP-208ENST00000548817 PZPP20742 1482 aa13.93□□□□□ -0.18
TROAP-208ENST00000548817 NLRP1Q9C000 1473 aa13.93□□□□□ -0.18
TROAP-208ENST00000548817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
TROAP-208ENST00000548817 UGGT1Q9NYU2 1555 aa13.9□□□□□ -0.18
TROAP-208ENST00000548817 STRCP1A6NGW2 1772 aa13.9□□□□□ -0.18
TROAP-208ENST00000548817 POTEAQ6S8J7 498 aa13.89□□□□□ -0.19
TROAP-208ENST00000548817 KDM5DQ9BY66 1539 aa13.88□□□□□ -0.19
TROAP-208ENST00000548817 GPATCH8Q9UKJ3 1502 aaKnown RBP13.88□□□□□ -0.19
TROAP-208ENST00000548817 HNRNPMP52272 730 aaKnown RBP eCLIP13.87□□□□□ -0.19
TROAP-208ENST00000548817 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
TROAP-208ENST00000548817 CASKIN1Q8WXD9 1431 aa13.87□□□□□ -0.19
TROAP-208ENST00000548817 SENP3Q9H4L4 574 aaPredicted RBP13.86□□□□□ -0.19
TROAP-208ENST00000548817 FAM135BQ49AJ0 1406 aa13.86□□□□□ -0.19
TROAP-208ENST00000548817 MIA2Q96PC5 1412 aa13.86□□□□□ -0.19
TROAP-208ENST00000548817 RTEL1-TNFRSF6BF6WH68 1400 aa13.84□□□□□ -0.19
TROAP-208ENST00000548817 ZC3H13Q5T200 1668 aaKnown RBP13.84□□□□□ -0.19
TROAP-208ENST00000548817 SETD1AO15047 1707 aaKnown RBP13.84□□□□□ -0.19
TROAP-208ENST00000548817 DHX29Q7Z478 1369 aaKnown RBP13.83□□□□□ -0.19
TROAP-208ENST00000548817 CHIC1Q5VXU3 224 aa13.83□□□□□ -0.2
TROAP-208ENST00000548817 FBXO31Q5XUX0 539 aaPredicted RBP13.83□□□□□ -0.2
TROAP-208ENST00000548817 CFDP1Q9UEE9 299 aaPredicted RBP13.81□□□□□ -0.2
TROAP-208ENST00000548817 XIRP1Q702N8 1843 aaKnown RBP13.8□□□□□ -0.2
TROAP-208ENST00000548817 FYCO1Q9BQS8 1478 aa13.8□□□□□ -0.2
TROAP-208ENST00000548817 WASHC2CQ9Y4E1 1318 aa13.79□□□□□ -0.2
TROAP-208ENST00000548817 LRRC9Q6ZRR7 1453 aa13.77□□□□□ -0.21
TROAP-208ENST00000548817 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.21
TROAP-208ENST00000548817 UPF1Q92900 1129 aaKnown RBP eCLIP13.77□□□□□ -0.21
TROAP-208ENST00000548817 SCAF11Q99590 1463 aaKnown RBP13.77□□□□□ -0.21
TROAP-208ENST00000548817 MBD5Q9P267 1494 aa13.77□□□□□ -0.21
TROAP-208ENST00000548817 KIF3BO15066 747 aa13.76□□□□□ -0.21
TROAP-208ENST00000548817 ROBO1Q9Y6N7 1651 aa13.75□□□□□ -0.21
TROAP-208ENST00000548817 UBR1Q8IWV7 1749 aa13.73□□□□□ -0.21
TROAP-208ENST00000548817 SLIT1O75093 1534 aa13.73□□□□□ -0.21
TROAP-208ENST00000548817 ARHGAP23Q9P227 1491 aa13.73□□□□□ -0.21
TROAP-208ENST00000548817 JCADQ9P266 1359 aa13.72□□□□□ -0.21
TROAP-208ENST00000548817 SRCAPQ6ZRS2 3230 aa13.71□□□□□ -0.21
TROAP-208ENST00000548817 ERVK-7P63135 1459 aa13.71□□□□□ -0.21
TROAP-208ENST00000548817 CCDC141Q6ZP82 1450 aa13.7□□□□□ -0.22
TROAP-208ENST00000548817 CDK12Q9NYV4 1490 aaPredicted RBP13.69□□□□□ -0.22
TROAP-208ENST00000548817 ZNF772Q68DY9 489 aaPredicted RBP13.69□□□□□ -0.22
TROAP-208ENST00000548817 TIAM1Q13009 1591 aa13.69□□□□□ -0.22
TROAP-208ENST00000548817 TMEM94Q12767 1356 aa13.69□□□□□ -0.22
TROAP-208ENST00000548817 ABCC3O15438 1527 aa13.69□□□□□ -0.22
TROAP-208ENST00000548817 PHLPP1O60346 1717 aa13.68□□□□□ -0.22
TROAP-208ENST00000548817 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
TROAP-208ENST00000548817 MAP3K1Q13233 1512 aa13.68□□□□□ -0.22
TROAP-208ENST00000548817 NCOA2Q15596 1464 aa13.67□□□□□ -0.22
TROAP-208ENST00000548817 SPATA31A6Q5VVP1 1343 aa13.66□□□□□ -0.22
TROAP-208ENST00000548817 ZNF644Q9H582 1327 aaPredicted RBP13.66□□□□□ -0.22
TROAP-208ENST00000548817 FGD6Q6ZV73 1430 aa13.66□□□□□ -0.22
TROAP-208ENST00000548817 TXNDC2Q86VQ3 553 aa13.66□□□□□ -0.22
TROAP-208ENST00000548817 MTUS2Q5JR59 1369 aa13.66□□□□□ -0.22
TROAP-208ENST00000548817 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
TROAP-208ENST00000548817 CAMSAP2Q08AD1 1489 aa13.66□□□□□ -0.22
TROAP-208ENST00000548817 LTKP29376 864 aa13.65□□□□□ -0.22
TROAP-208ENST00000548817 EID1Q9Y6B2 187 aa13.65□□□□□ -0.22
TROAP-208ENST00000548817 PRDM15P57071 1507 aaPredicted RBP13.64□□□□□ -0.23
TROAP-208ENST00000548817 EIF2AK4Q9P2K8 1649 aaKnown RBP13.64□□□□□ -0.23
TROAP-208ENST00000548817 KCNA6P17658 529 aa13.64□□□□□ -0.23
TROAP-208ENST00000548817 COL16A1Q07092 1604 aaPredicted RBP13.64□□□□□ -0.23
TROAP-208ENST00000548817 EHBP1L1Q8N3D4 1523 aa13.63□□□□□ -0.23
TROAP-208ENST00000548817 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
TROAP-208ENST00000548817 NWD1Q149M9 1564 aa13.62□□□□□ -0.23
TROAP-208ENST00000548817 MSH6P52701 1360 aa13.62□□□□□ -0.23
TROAP-208ENST00000548817 TRIM52Q96A61 297 aa13.62□□□□□ -0.23
TROAP-208ENST00000548817 ARHGEF5Q12774 1597 aa13.62□□□□□ -0.23
TROAP-208ENST00000548817 LRP6O75581 1613 aa13.61□□□□□ -0.23
TROAP-208ENST00000548817 RXRBP28702 533 aa13.61□□□□□ -0.23
TROAP-208ENST00000548817 PROSER2Q86WR7 435 aaPredicted RBP13.61□□□□□ -0.23
TROAP-208ENST00000548817 CEP162Q5TB80 1403 aa13.61□□□□□ -0.23
TROAP-208ENST00000548817 TMEM2Q9UHN6 1383 aa13.6□□□□□ -0.23
TROAP-208ENST00000548817 SHPRHQ149N8 1683 aa13.6□□□□□ -0.23
TROAP-208ENST00000548817 SLAIN2Q9P270 581 aa13.6□□□□□ -0.23
TROAP-208ENST00000548817 ARHGAP31Q2M1Z3 1444 aa13.59□□□□□ -0.23
TROAP-208ENST00000548817 MEX3CQ5U5Q3 659 aaKnown RBP13.59□□□□□ -0.23
TROAP-208ENST00000548817 MROH1Q8NDA8 1641 aa13.59□□□□□ -0.23
TROAP-208ENST00000548817 FOXD1Q16676 465 aa13.58□□□□□ -0.24
TROAP-208ENST00000548817 TET3O43151 1660 aa13.58□□□□□ -0.24
TROAP-208ENST00000548817 CEP152O94986 1710 aa13.57□□□□□ -0.24
TROAP-208ENST00000548817 TSPY4P0CV99 314 aa13.57□□□□□ -0.24
TROAP-208ENST00000548817 TSPY10P0CW01 314 aa13.57□□□□□ -0.24
TROAP-208ENST00000548817 MAST1Q9Y2H9 1570 aa13.57□□□□□ -0.24
TROAP-208ENST00000548817 PIK3C2BO00750 1634 aa13.57□□□□□ -0.24
TROAP-208ENST00000548817 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
TROAP-208ENST00000548817 EFCAB6Q5THR3 1501 aa13.55□□□□□ -0.24
TROAP-208ENST00000548817 CFAP65Q6ZU64 1925 aaKnown RBP13.55□□□□□ -0.24
TROAP-208ENST00000548817 NCOA3Q9Y6Q9 1424 aa13.55□□□□□ -0.24
TROAP-208ENST00000548817 RGS12O14924 1447 aa13.5□□□□□ -0.25
TROAP-208ENST00000548817 RBM33Q96EV2 1170 aaKnown RBP13.5□□□□□ -0.25
TROAP-208ENST00000548817 SLC26A8Q96RN1 970 aa13.5□□□□□ -0.25
TROAP-208ENST00000548817 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
TROAP-208ENST00000548817 DUOX2Q9NRD8 1548 aa13.49□□□□□ -0.25
TROAP-208ENST00000548817 CHD2O14647 1828 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms