RNA–Protein interactions for RNA: ENST00000548209.5

LETMD1-213, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-213ENST00000548209 XIRP1Q702N8 1843 aaKnown RBP16.57■□□□□ 0.24
LETMD1-213ENST00000548209 LRRC7Q96NW7 1537 aa16.57■□□□□ 0.24
LETMD1-213ENST00000548209 POTEAQ6S8J7 498 aa16.57■□□□□ 0.24
LETMD1-213ENST00000548209 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
LETMD1-213ENST00000548209 NPHP4O75161 1426 aaPredicted RBP16.55■□□□□ 0.24
LETMD1-213ENST00000548209 MED14O60244 1454 aa16.54■□□□□ 0.24
LETMD1-213ENST00000548209 TNRQ92752 1358 aa16.54■□□□□ 0.24
LETMD1-213ENST00000548209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.54■□□□□ 0.24
LETMD1-213ENST00000548209 ZNF777Q9ULD5 760 aaPredicted RBP16.54■□□□□ 0.24
LETMD1-213ENST00000548209 TRIM26Q12899 539 aaPredicted RBP16.53■□□□□ 0.24
LETMD1-213ENST00000548209 ARHGAP35Q9NRY4 1499 aa16.53■□□□□ 0.24
LETMD1-213ENST00000548209 HRCP23327 699 aa16.52■□□□□ 0.24
LETMD1-213ENST00000548209 UGGT1Q9NYU2 1555 aa16.51■□□□□ 0.23
LETMD1-213ENST00000548209 HNRNPMP52272 730 aaKnown RBP eCLIP16.5■□□□□ 0.23
LETMD1-213ENST00000548209 FAM135AQ9P2D6 1515 aa16.5■□□□□ 0.23
LETMD1-213ENST00000548209 ZC3H13Q5T200 1668 aaKnown RBP16.5■□□□□ 0.23
LETMD1-213ENST00000548209 CCDC18Q5T9S5 1454 aa16.49■□□□□ 0.23
LETMD1-213ENST00000548209 THEMISQ8N1K5 641 aaPredicted RBP16.49■□□□□ 0.23
LETMD1-213ENST00000548209 PZPP20742 1482 aa16.48■□□□□ 0.23
LETMD1-213ENST00000548209 FBXO31Q5XUX0 539 aaPredicted RBP16.48■□□□□ 0.23
LETMD1-213ENST00000548209 NLRP1Q9C000 1473 aa16.47■□□□□ 0.23
LETMD1-213ENST00000548209 CFAP65Q6ZU64 1925 aaKnown RBP16.47■□□□□ 0.23
LETMD1-213ENST00000548209 PLEKHH2Q8IVE3 1493 aa16.46■□□□□ 0.23
LETMD1-213ENST00000548209 KDM5DQ9BY66 1539 aa16.45■□□□□ 0.22
LETMD1-213ENST00000548209 ROBO1Q9Y6N7 1651 aa16.44■□□□□ 0.22
LETMD1-213ENST00000548209 KIAA1107Q9UPP5 1409 aa16.44■□□□□ 0.22
LETMD1-213ENST00000548209 GPATCH8Q9UKJ3 1502 aaKnown RBP16.43■□□□□ 0.22
LETMD1-213ENST00000548209 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
LETMD1-213ENST00000548209 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
LETMD1-213ENST00000548209 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
LETMD1-213ENST00000548209 FAM135BQ49AJ0 1406 aa16.4■□□□□ 0.22
LETMD1-213ENST00000548209 PHLPP1O60346 1717 aa16.39■□□□□ 0.21
LETMD1-213ENST00000548209 UPF1Q92900 1129 aaKnown RBP eCLIP16.39■□□□□ 0.21
LETMD1-213ENST00000548209 UBR1Q8IWV7 1749 aa16.39■□□□□ 0.21
LETMD1-213ENST00000548209 CASKIN1Q8WXD9 1431 aa16.38■□□□□ 0.21
LETMD1-213ENST00000548209 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
LETMD1-213ENST00000548209 DHX29Q7Z478 1369 aaKnown RBP16.36■□□□□ 0.21
LETMD1-213ENST00000548209 KIF3BO15066 747 aa16.35■□□□□ 0.21
LETMD1-213ENST00000548209 WASHC2CQ9Y4E1 1318 aa16.35■□□□□ 0.21
LETMD1-213ENST00000548209 SRCAPQ6ZRS2 3230 aa16.32■□□□□ 0.2
LETMD1-213ENST00000548209 RTEL1-TNFRSF6BF6WH68 1400 aa16.32■□□□□ 0.2
LETMD1-213ENST00000548209 CCNB3Q8WWL7 1395 aa16.32■□□□□ 0.2
LETMD1-213ENST00000548209 SCAF11Q99590 1463 aaKnown RBP16.32■□□□□ 0.2
LETMD1-213ENST00000548209 CEP162Q5TB80 1403 aa16.31■□□□□ 0.2
LETMD1-213ENST00000548209 LRRC9Q6ZRR7 1453 aa16.3■□□□□ 0.2
LETMD1-213ENST00000548209 FYCO1Q9BQS8 1478 aa16.3■□□□□ 0.2
LETMD1-213ENST00000548209 TRIM52Q96A61 297 aa16.3■□□□□ 0.2
LETMD1-213ENST00000548209 CEP152O94986 1710 aa16.28■□□□□ 0.2
LETMD1-213ENST00000548209 MBD5Q9P267 1494 aa16.28■□□□□ 0.2
LETMD1-213ENST00000548209 JCADQ9P266 1359 aa16.27■□□□□ 0.2
LETMD1-213ENST00000548209 TIAM1Q13009 1591 aa16.26■□□□□ 0.19
LETMD1-213ENST00000548209 ERVK-7P63135 1459 aa16.26■□□□□ 0.19
LETMD1-213ENST00000548209 TMEM94Q12767 1356 aa16.26■□□□□ 0.19
LETMD1-213ENST00000548209 MAP3K1Q13233 1512 aa16.25■□□□□ 0.19
LETMD1-213ENST00000548209 ZNF644Q9H582 1327 aaPredicted RBP16.25■□□□□ 0.19
LETMD1-213ENST00000548209 SLIT1O75093 1534 aa16.24■□□□□ 0.19
LETMD1-213ENST00000548209 COL16A1Q07092 1604 aaPredicted RBP16.24■□□□□ 0.19
LETMD1-213ENST00000548209 ABCC3O15438 1527 aa16.24■□□□□ 0.19
LETMD1-213ENST00000548209 ARHGAP23Q9P227 1491 aa16.23■□□□□ 0.19
LETMD1-213ENST00000548209 MEX3CQ5U5Q3 659 aaKnown RBP16.23■□□□□ 0.19
LETMD1-213ENST00000548209 ZNF772Q68DY9 489 aaPredicted RBP16.23■□□□□ 0.19
LETMD1-213ENST00000548209 LRP6O75581 1613 aa16.23■□□□□ 0.19
LETMD1-213ENST00000548209 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
LETMD1-213ENST00000548209 LTKP29376 864 aa16.22■□□□□ 0.19
LETMD1-213ENST00000548209 TXNDC2Q86VQ3 553 aa16.22■□□□□ 0.19
LETMD1-213ENST00000548209 SHPRHQ149N8 1683 aa16.21■□□□□ 0.19
LETMD1-213ENST00000548209 CCDC141Q6ZP82 1450 aa16.21■□□□□ 0.19
LETMD1-213ENST00000548209 MTUS2Q5JR59 1369 aa16.19■□□□□ 0.18
LETMD1-213ENST00000548209 EID1Q9Y6B2 187 aa16.19■□□□□ 0.18
LETMD1-213ENST00000548209 CDK12Q9NYV4 1490 aaPredicted RBP16.18■□□□□ 0.18
LETMD1-213ENST00000548209 RXRBP28702 533 aa16.18■□□□□ 0.18
LETMD1-213ENST00000548209 PROSER2Q86WR7 435 aaPredicted RBP16.18■□□□□ 0.18
LETMD1-213ENST00000548209 PIK3C2BO00750 1634 aa16.18■□□□□ 0.18
LETMD1-213ENST00000548209 EIF2AK4Q9P2K8 1649 aaKnown RBP16.17■□□□□ 0.18
LETMD1-213ENST00000548209 PRDM15P57071 1507 aaPredicted RBP16.17■□□□□ 0.18
LETMD1-213ENST00000548209 SPATA31A6Q5VVP1 1343 aa16.17■□□□□ 0.18
LETMD1-213ENST00000548209 MSH6P52701 1360 aa16.16■□□□□ 0.18
LETMD1-213ENST00000548209 KDM5AP29375 1690 aaKnown RBP16.16■□□□□ 0.18
LETMD1-213ENST00000548209 ZEB1P37275 1124 aaPredicted RBP16.16■□□□□ 0.18
LETMD1-213ENST00000548209 RBM33Q96EV2 1170 aaKnown RBP16.16■□□□□ 0.18
LETMD1-213ENST00000548209 NWD1Q149M9 1564 aa16.16■□□□□ 0.18
LETMD1-213ENST00000548209 KCNA6P17658 529 aa16.15■□□□□ 0.18
LETMD1-213ENST00000548209 MROH1Q8NDA8 1641 aa16.15■□□□□ 0.18
LETMD1-213ENST00000548209 NKTRP30414 1462 aaKnown RBP16.15■□□□□ 0.18
LETMD1-213ENST00000548209 CAMSAP2Q08AD1 1489 aa16.15■□□□□ 0.18
LETMD1-213ENST00000548209 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
LETMD1-213ENST00000548209 SLAIN2Q9P270 581 aa16.14■□□□□ 0.17
LETMD1-213ENST00000548209 EHBP1L1Q8N3D4 1523 aa16.14■□□□□ 0.17
LETMD1-213ENST00000548209 CHD2O14647 1828 aaKnown RBP16.13■□□□□ 0.17
LETMD1-213ENST00000548209 ARHGEF5Q12774 1597 aa16.12■□□□□ 0.17
LETMD1-213ENST00000548209 TET3O43151 1660 aa16.11■□□□□ 0.17
LETMD1-213ENST00000548209 AHDC1Q5TGY3 1603 aaPredicted RBP16.1■□□□□ 0.17
LETMD1-213ENST00000548209 TMEM2Q9UHN6 1383 aa16.1■□□□□ 0.17
LETMD1-213ENST00000548209 RSPH4AQ5TD94 716 aa16.09■□□□□ 0.17
LETMD1-213ENST00000548209 SLC26A8Q96RN1 970 aa16.08■□□□□ 0.16
LETMD1-213ENST00000548209 EFCAB6Q5THR3 1501 aa16.08■□□□□ 0.16
LETMD1-213ENST00000548209 STAG3Q9UJ98 1225 aa16.07■□□□□ 0.16
LETMD1-213ENST00000548209 RGS12O14924 1447 aa16.07■□□□□ 0.16
LETMD1-213ENST00000548209 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.06■□□□□ 0.16
LETMD1-213ENST00000548209 MAST1Q9Y2H9 1570 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms