RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 RSPH4AQ5TD94 716 aa32.15■■■□□ 2.74
GATC-202ENST00000548171 POLR1AO95602 1720 aaPredicted RBP32.14■■■□□ 2.74
GATC-202ENST00000548171 CAMSAP2Q08AD1 1489 aa32.13■■■□□ 2.73
GATC-202ENST00000548171 NCOA2Q15596 1464 aa32.13■■■□□ 2.73
GATC-202ENST00000548171 KDM5DQ9BY66 1539 aa32.13■■■□□ 2.73
GATC-202ENST00000548171 PZPP20742 1482 aa32.1■■■□□ 2.73
GATC-202ENST00000548171 UBAP1LF5GYI3 381 aa32.1■■■□□ 2.73
GATC-202ENST00000548171 KIF3BO15066 747 aa32.1■■■□□ 2.73
GATC-202ENST00000548171 TNRQ92752 1358 aa32.08■■■□□ 2.73
GATC-202ENST00000548171 ARHGEF5Q12774 1597 aa32.07■■■□□ 2.72
GATC-202ENST00000548171 WASHC2CQ9Y4E1 1318 aa32.03■■■□□ 2.72
GATC-202ENST00000548171 NEURL4Q96JN8 1562 aa32.02■■■□□ 2.72
GATC-202ENST00000548171 FBXO31Q5XUX0 539 aaPredicted RBP32.02■■■□□ 2.72
GATC-202ENST00000548171 CPS1P31327 1500 aa32■■■□□ 2.71
GATC-202ENST00000548171 NLRP1Q9C000 1473 aa31.99■■■□□ 2.71
GATC-202ENST00000548171 TSPY4P0CV99 314 aa31.98■■■□□ 2.71
GATC-202ENST00000548171 TSPY10P0CW01 314 aa31.98■■■□□ 2.71
GATC-202ENST00000548171 MIA2Q96PC5 1412 aa31.96■■■□□ 2.71
GATC-202ENST00000548171 RNF17Q9BXT8 1623 aaKnown RBP31.95■■■□□ 2.71
GATC-202ENST00000548171 ANKLE2Q86XL3 938 aa31.94■■■□□ 2.7
GATC-202ENST00000548171 THEMISQ8N1K5 641 aaPredicted RBP31.94■■■□□ 2.7
GATC-202ENST00000548171 SHANK2Q9UPX8 1470 aa31.94■■■□□ 2.7
GATC-202ENST00000548171 ZC3H13Q5T200 1668 aaKnown RBP31.94■■■□□ 2.7
GATC-202ENST00000548171 UGGT1Q9NYU2 1555 aa31.93■■■□□ 2.7
GATC-202ENST00000548171 MAST1Q9Y2H9 1570 aa31.93■■■□□ 2.7
GATC-202ENST00000548171 DEPDC5O75140 1603 aa31.93■■■□□ 2.7
GATC-202ENST00000548171 EIF2AK4Q9P2K8 1649 aaKnown RBP31.9■■■□□ 2.7
GATC-202ENST00000548171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.9■■■□□ 2.7
GATC-202ENST00000548171 LRRC9Q6ZRR7 1453 aa31.9■■■□□ 2.7
GATC-202ENST00000548171 MED14O60244 1454 aa31.89■■■□□ 2.7
GATC-202ENST00000548171 VWDEQ8N2E2 1590 aa31.87■■■□□ 2.69
GATC-202ENST00000548171 TOM1O60784 492 aa31.87■■■□□ 2.69
GATC-202ENST00000548171 VPS8Q8N3P4 1428 aa31.86■■■□□ 2.69
GATC-202ENST00000548171 ABCC3O15438 1527 aa31.85■■■□□ 2.69
GATC-202ENST00000548171 NPHP4O75161 1426 aaPredicted RBP31.84■■■□□ 2.69
GATC-202ENST00000548171 IQGAP1P46940 1657 aa31.84■■■□□ 2.69
GATC-202ENST00000548171 SCAF1Q9H7N4 1312 aaKnown RBP31.81■■■□□ 2.68
GATC-202ENST00000548171 MAP3K1Q13233 1512 aa31.81■■■□□ 2.68
GATC-202ENST00000548171 PIP4K2BP78356 416 aa31.78■■■□□ 2.68
GATC-202ENST00000548171 HSPA1LP34931 641 aa31.77■■■□□ 2.68
GATC-202ENST00000548171 MROH1Q8NDA8 1641 aa31.77■■■□□ 2.68
GATC-202ENST00000548171 ERVK-7P63135 1459 aa31.77■■■□□ 2.68
GATC-202ENST00000548171 MYOM3Q5VTT5 1437 aa31.75■■■□□ 2.67
GATC-202ENST00000548171 CEP152O94986 1710 aa31.75■■■□□ 2.67
GATC-202ENST00000548171 CFAP65Q6ZU64 1925 aaKnown RBP31.75■■■□□ 2.67
GATC-202ENST00000548171 DUOX2Q9NRD8 1548 aa31.73■■■□□ 2.67
GATC-202ENST00000548171 MED1Q15648 1581 aaPredicted RBP31.73■■■□□ 2.67
GATC-202ENST00000548171 UBR1Q8IWV7 1749 aa31.72■■■□□ 2.67
GATC-202ENST00000548171 SYNMO15061 1565 aa31.71■■■□□ 2.67
GATC-202ENST00000548171 STRCP1A6NGW2 1772 aa31.7■■■□□ 2.67
GATC-202ENST00000548171 ALKQ9UM73 1620 aa31.68■■■□□ 2.66
GATC-202ENST00000548171 KANK4Q5T7N3 995 aaPredicted RBP31.68■■■□□ 2.66
GATC-202ENST00000548171 CROCC2H7BZ55 1655 aa31.66■■■□□ 2.66
GATC-202ENST00000548171 PRDM15P57071 1507 aaPredicted RBP31.65■■■□□ 2.66
GATC-202ENST00000548171 LRRC7Q96NW7 1537 aa31.64■■■□□ 2.66
GATC-202ENST00000548171 ARHGAP31Q2M1Z3 1444 aa31.62■■■□□ 2.65
GATC-202ENST00000548171 SCAF11Q99590 1463 aaKnown RBP31.61■■■□□ 2.65
GATC-202ENST00000548171 ERBINQ96RT1 1412 aa31.61■■■□□ 2.65
GATC-202ENST00000548171 LOC105371045A0A1W2PR82 267 aa31.59■■■□□ 2.65
GATC-202ENST00000548171 SLIT1O75093 1534 aa31.59■■■□□ 2.65
GATC-202ENST00000548171 ARHGAP23Q9P227 1491 aa31.59■■■□□ 2.65
GATC-202ENST00000548171 KIF15Q9NS87 1388 aa31.58■■■□□ 2.65
GATC-202ENST00000548171 PTPN23Q9H3S7 1636 aa31.56■■■□□ 2.64
GATC-202ENST00000548171 ABCC5O15440 1437 aa31.54■■■□□ 2.64
GATC-202ENST00000548171 KDM5AP29375 1690 aaKnown RBP31.51■■■□□ 2.64
GATC-202ENST00000548171 TXNDC2Q86VQ3 553 aa31.51■■■□□ 2.63
GATC-202ENST00000548171 PIK3C2BO00750 1634 aa31.5■■■□□ 2.63
GATC-202ENST00000548171 LTKP29376 864 aa31.49■■■□□ 2.63
GATC-202ENST00000548171 RRP7BPQ9NSQ0 103 aa31.49■■■□□ 2.63
GATC-202ENST00000548171 EID1Q9Y6B2 187 aa31.49■■■□□ 2.63
GATC-202ENST00000548171 KANK1Q14678 1352 aa31.48■■■□□ 2.63
GATC-202ENST00000548171 XIRP1Q702N8 1843 aaKnown RBP31.48■■■□□ 2.63
GATC-202ENST00000548171 DAPK1P53355 1430 aa31.48■■■□□ 2.63
GATC-202ENST00000548171 PHF23Q9BUL5 403 aaPredicted RBP31.47■■■□□ 2.63
GATC-202ENST00000548171 APLP2Q06481 763 aa31.46■■■□□ 2.63
GATC-202ENST00000548171 TMEM2Q9UHN6 1383 aa31.43■■■□□ 2.62
GATC-202ENST00000548171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.43■■■□□ 2.62
GATC-202ENST00000548171 LMTK2Q8IWU2 1503 aa31.43■■■□□ 2.62
GATC-202ENST00000548171 FGD6Q6ZV73 1430 aa31.41■■■□□ 2.62
GATC-202ENST00000548171 EFCAB6Q5THR3 1501 aa31.4■■■□□ 2.62
GATC-202ENST00000548171 STAG3Q9UJ98 1225 aa31.4■■■□□ 2.62
GATC-202ENST00000548171 ANKRD30AQ9BXX3 1397 aa31.4■■■□□ 2.62
GATC-202ENST00000548171 SENP3Q9H4L4 574 aaPredicted RBP31.35■■■□□ 2.61
GATC-202ENST00000548171 IDI1Q13907 227 aa31.32■■■□□ 2.6
GATC-202ENST00000548171 TET3O43151 1660 aa31.29■■■□□ 2.6
GATC-202ENST00000548171 CHIC2Q9UKJ5 165 aa31.29■■■□□ 2.6
GATC-202ENST00000548171 NOS1P29475 1434 aa31.29■■■□□ 2.6
GATC-202ENST00000548171 FAM135BQ49AJ0 1406 aa31.29■■■□□ 2.6
GATC-202ENST00000548171 ADGRB3O60242 1522 aa31.29■■■□□ 2.6
GATC-202ENST00000548171 KCNA6P17658 529 aa31.27■■■□□ 2.6
GATC-202ENST00000548171 ADGRL2O95490 1459 aa31.27■■■□□ 2.6
GATC-202ENST00000548171 TMEM94Q12767 1356 aa31.26■■■□□ 2.59
GATC-202ENST00000548171 SLC52A1Q9NWF4 448 aa31.25■■■□□ 2.59
GATC-202ENST00000548171 RPRD2Q5VT52 1461 aaKnown RBP31.23■■■□□ 2.59
GATC-202ENST00000548171 NKTRP30414 1462 aaKnown RBP31.22■■■□□ 2.59
GATC-202ENST00000548171 NWD1Q149M9 1564 aa31.22■■■□□ 2.59
GATC-202ENST00000548171 ROBO1Q9Y6N7 1651 aa31.2■■■□□ 2.59
GATC-202ENST00000548171 SLC26A8Q96RN1 970 aa31.2■■■□□ 2.59
GATC-202ENST00000548171 PROSER2Q86WR7 435 aaPredicted RBP31.19■■■□□ 2.58
GATC-202ENST00000548171 MYO5BQ9ULV0 1848 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms