RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 SHANK2Q9UPX8 1470 aa19.85■□□□□ 0.77
GCN1-204ENST00000548132 POLR1AO95602 1720 aaPredicted RBP19.83■□□□□ 0.77
GCN1-204ENST00000548132 TCOF1Q13428 1488 aaKnown RBP19.83■□□□□ 0.76
GCN1-204ENST00000548132 DEPDC5O75140 1603 aa19.83■□□□□ 0.76
GCN1-204ENST00000548132 ABCC3O15438 1527 aa19.82■□□□□ 0.76
GCN1-204ENST00000548132 PZPP20742 1482 aa19.82■□□□□ 0.76
GCN1-204ENST00000548132 PRDM15P57071 1507 aaPredicted RBP19.81■□□□□ 0.76
GCN1-204ENST00000548132 LTBP4Q8N2S1 1624 aa19.8■□□□□ 0.76
GCN1-204ENST00000548132 NEURL4Q96JN8 1562 aa19.79■□□□□ 0.76
GCN1-204ENST00000548132 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
GCN1-204ENST00000548132 PLA2R1Q13018 1463 aa19.79■□□□□ 0.76
GCN1-204ENST00000548132 PTPRTO14522 1441 aa19.78■□□□□ 0.76
GCN1-204ENST00000548132 DUOX2Q9NRD8 1548 aa19.77■□□□□ 0.76
GCN1-204ENST00000548132 ABCC5O15440 1437 aa19.76■□□□□ 0.75
GCN1-204ENST00000548132 SPATA31D1Q6ZQQ2 1576 aa19.76■□□□□ 0.75
GCN1-204ENST00000548132 A2ML1A8K2U0 1454 aa19.76■□□□□ 0.75
GCN1-204ENST00000548132 GGT6Q6P531 493 aa19.75■□□□□ 0.75
GCN1-204ENST00000548132 ESF1Q9H501 851 aaKnown RBP19.75■□□□□ 0.75
GCN1-204ENST00000548132 FBXO41Q8TF61 875 aa19.74■□□□□ 0.75
GCN1-204ENST00000548132 DAPK1P53355 1430 aa19.74■□□□□ 0.75
GCN1-204ENST00000548132 RSPH4AQ5TD94 716 aa19.72■□□□□ 0.75
GCN1-204ENST00000548132 PPP6R1Q9UPN7 881 aa19.71■□□□□ 0.75
GCN1-204ENST00000548132 KIF3BO15066 747 aa19.7■□□□□ 0.74
GCN1-204ENST00000548132 VWDEQ8N2E2 1590 aa19.7■□□□□ 0.74
GCN1-204ENST00000548132 ERBINQ96RT1 1412 aa19.69■□□□□ 0.74
GCN1-204ENST00000548132 ERVK-7P63135 1459 aa19.68■□□□□ 0.74
GCN1-204ENST00000548132 TNRQ92752 1358 aa19.68■□□□□ 0.74
GCN1-204ENST00000548132 UBR1Q8IWV7 1749 aa19.68■□□□□ 0.74
GCN1-204ENST00000548132 ADGRL2O95490 1459 aa19.67■□□□□ 0.74
GCN1-204ENST00000548132 KIF15Q9NS87 1388 aa19.67■□□□□ 0.74
GCN1-204ENST00000548132 NLRP1Q9C000 1473 aa19.65■□□□□ 0.74
GCN1-204ENST00000548132 CFAP65Q6ZU64 1925 aaKnown RBP19.64■□□□□ 0.74
GCN1-204ENST00000548132 CERKQ8TCT0 537 aa19.64■□□□□ 0.73
GCN1-204ENST00000548132 FBXO31Q5XUX0 539 aaPredicted RBP19.63■□□□□ 0.73
GCN1-204ENST00000548132 UGGT1Q9NYU2 1555 aa19.62■□□□□ 0.73
GCN1-204ENST00000548132 IQSEC2Q5JU85 1478 aa19.62■□□□□ 0.73
GCN1-204ENST00000548132 TSPY4P0CV99 314 aa19.62■□□□□ 0.73
GCN1-204ENST00000548132 TSPY10P0CW01 314 aa19.62■□□□□ 0.73
GCN1-204ENST00000548132 LMTK2Q8IWU2 1503 aa19.61■□□□□ 0.73
GCN1-204ENST00000548132 IQGAP1P46940 1657 aa19.61■□□□□ 0.73
GCN1-204ENST00000548132 EFCAB6Q5THR3 1501 aa19.61■□□□□ 0.73
GCN1-204ENST00000548132 PIK3C2BO00750 1634 aa19.59■□□□□ 0.73
GCN1-204ENST00000548132 NCKAP5LQ9HCH0 1330 aa19.59■□□□□ 0.73
GCN1-204ENST00000548132 SYNMO15061 1565 aa19.59■□□□□ 0.73
GCN1-204ENST00000548132 DMRT2Q9Y5R5 561 aa19.59■□□□□ 0.73
GCN1-204ENST00000548132 STRCP1A6NGW2 1772 aa19.59■□□□□ 0.73
GCN1-204ENST00000548132 UNC13BO14795 1591 aa19.58■□□□□ 0.73
GCN1-204ENST00000548132 WASHC2CQ9Y4E1 1318 aa19.58■□□□□ 0.73
GCN1-204ENST00000548132 ARHGAP31Q2M1Z3 1444 aa19.58■□□□□ 0.72
GCN1-204ENST00000548132 KDM5AP29375 1690 aaKnown RBP19.56■□□□□ 0.72
GCN1-204ENST00000548132 MED14O60244 1454 aa19.55■□□□□ 0.72
GCN1-204ENST00000548132 ZNF335Q9H4Z2 1342 aaPredicted RBP19.53■□□□□ 0.72
GCN1-204ENST00000548132 TET3O43151 1660 aa19.53■□□□□ 0.72
GCN1-204ENST00000548132 GCC2Q8IWJ2 1684 aa19.53■□□□□ 0.72
GCN1-204ENST00000548132 APLP2Q06481 763 aa19.52■□□□□ 0.72
GCN1-204ENST00000548132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.52■□□□□ 0.72
GCN1-204ENST00000548132 ARHGAP23Q9P227 1491 aa19.52■□□□□ 0.72
GCN1-204ENST00000548132 SLIT1O75093 1534 aa19.51■□□□□ 0.71
GCN1-204ENST00000548132 PKD2Q13563 968 aa19.51■□□□□ 0.71
GCN1-204ENST00000548132 ANKRD30AQ9BXX3 1397 aa19.5■□□□□ 0.71
GCN1-204ENST00000548132 MYO5BQ9ULV0 1848 aa19.5■□□□□ 0.71
GCN1-204ENST00000548132 ALKQ9UM73 1620 aa19.5■□□□□ 0.71
GCN1-204ENST00000548132 RRP7BPQ9NSQ0 103 aa19.49■□□□□ 0.71
GCN1-204ENST00000548132 IQGAP3Q86VI3 1631 aa19.47■□□□□ 0.71
GCN1-204ENST00000548132 ADGRB3O60242 1522 aa19.47■□□□□ 0.71
GCN1-204ENST00000548132 E9PCH4 1651 aa19.47■□□□□ 0.71
GCN1-204ENST00000548132 XIRP1Q702N8 1843 aaKnown RBP19.46■□□□□ 0.71
GCN1-204ENST00000548132 CPS1P31327 1500 aa19.46■□□□□ 0.71
GCN1-204ENST00000548132 NPHP4O75161 1426 aaPredicted RBP19.46■□□□□ 0.71
GCN1-204ENST00000548132 NOS1P29475 1434 aa19.45■□□□□ 0.7
GCN1-204ENST00000548132 CHIC2Q9UKJ5 165 aa19.45■□□□□ 0.7
GCN1-204ENST00000548132 ANKRD50Q9ULJ7 1429 aa19.44■□□□□ 0.7
GCN1-204ENST00000548132 SCAF11Q99590 1463 aaKnown RBP19.43■□□□□ 0.7
GCN1-204ENST00000548132 RPRD2Q5VT52 1461 aaKnown RBP19.4■□□□□ 0.7
GCN1-204ENST00000548132 ROCK1Q13464 1354 aa19.38■□□□□ 0.69
GCN1-204ENST00000548132 FAM50AQ14320 339 aaKnown RBP19.38■□□□□ 0.69
GCN1-204ENST00000548132 KANK1Q14678 1352 aa19.38■□□□□ 0.69
GCN1-204ENST00000548132 TMEM131LA2VDJ0 1609 aa19.37■□□□□ 0.69
GCN1-204ENST00000548132 THEMISQ8N1K5 641 aaPredicted RBP19.35■□□□□ 0.69
GCN1-204ENST00000548132 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.35■□□□□ 0.693e-7■■■□□ 15.4
GCN1-204ENST00000548132 NWD1Q149M9 1564 aa19.35■□□□□ 0.69
GCN1-204ENST00000548132 LRRC7Q96NW7 1537 aa19.35■□□□□ 0.69
GCN1-204ENST00000548132 RRBP1Q9P2E9 1410 aaKnown RBP19.34■□□□□ 0.69
GCN1-204ENST00000548132 ANKLE2Q86XL3 938 aa19.33■□□□□ 0.68
GCN1-204ENST00000548132 SPHKAPQ2M3C7 1700 aa19.33■□□□□ 0.68
GCN1-204ENST00000548132 TMEM2Q9UHN6 1383 aa19.32■□□□□ 0.68
GCN1-204ENST00000548132 LTKP29376 864 aa19.3■□□□□ 0.68
GCN1-204ENST00000548132 ZFYVE9O95405 1425 aa19.3■□□□□ 0.68
GCN1-204ENST00000548132 PPARGC1BQ86YN6 1023 aaKnown RBP19.26■□□□□ 0.67
GCN1-204ENST00000548132 IDI1Q13907 227 aa19.25■□□□□ 0.67
GCN1-204ENST00000548132 CHD2O14647 1828 aaKnown RBP19.24■□□□□ 0.67
GCN1-204ENST00000548132 NRXN3Q9Y4C0 1643 aa19.23■□□□□ 0.67
GCN1-204ENST00000548132 UBAP1LF5GYI3 381 aa19.23■□□□□ 0.67
GCN1-204ENST00000548132 CLTCL1P53675 1640 aa19.22■□□□□ 0.67
GCN1-204ENST00000548132 NAIPQ13075 1403 aa19.2■□□□□ 0.66
GCN1-204ENST00000548132 NKTRP30414 1462 aaKnown RBP19.2■□□□□ 0.66
GCN1-204ENST00000548132 MED1Q15648 1581 aaPredicted RBP19.19■□□□□ 0.66
GCN1-204ENST00000548132 TXNDC2Q86VQ3 553 aa19.18■□□□□ 0.66
GCN1-204ENST00000548132 TRPM2O94759 1503 aa19.18■□□□□ 0.66
GCN1-204ENST00000548132 DIP2AQ14689 1571 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms