RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 SHANK2Q9UPX8 1470 aa22.39■■□□□ 1.17
SEC23A-204ENST00000548032 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
SEC23A-204ENST00000548032 KIF15Q9NS87 1388 aa22.38■■□□□ 1.17
SEC23A-204ENST00000548032 WASHC2CQ9Y4E1 1318 aa22.37■■□□□ 1.17
SEC23A-204ENST00000548032 DNMT1P26358 1616 aaKnown RBP22.36■■□□□ 1.17
SEC23A-204ENST00000548032 NPATQ14207 1427 aa22.36■■□□□ 1.17
SEC23A-204ENST00000548032 CROCC2H7BZ55 1655 aa22.36■■□□□ 1.17
SEC23A-204ENST00000548032 SETD1BQ9UPS6 1966 aaKnown RBP22.34■■□□□ 1.17
SEC23A-204ENST00000548032 PTPRKQ15262 1439 aa22.34■■□□□ 1.17
SEC23A-204ENST00000548032 KDM5DQ9BY66 1539 aa22.34■■□□□ 1.17
SEC23A-204ENST00000548032 DUOX2Q9NRD8 1548 aa22.34■■□□□ 1.17
SEC23A-204ENST00000548032 ANKRD30AQ9BXX3 1397 aa22.32■■□□□ 1.16
SEC23A-204ENST00000548032 EIF2AK4Q9P2K8 1649 aaKnown RBP22.29■■□□□ 1.16
SEC23A-204ENST00000548032 FBXO31Q5XUX0 539 aaPredicted RBP22.29■■□□□ 1.16
SEC23A-204ENST00000548032 FAM135AQ9P2D6 1515 aa22.29■■□□□ 1.16
SEC23A-204ENST00000548032 RNF17Q9BXT8 1623 aaKnown RBP22.28■■□□□ 1.16
SEC23A-204ENST00000548032 ERBINQ96RT1 1412 aa22.28■■□□□ 1.16
SEC23A-204ENST00000548032 STRCQ7RTU9 1775 aa22.27■■□□□ 1.16
SEC23A-204ENST00000548032 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.26■■□□□ 1.15
SEC23A-204ENST00000548032 PZPP20742 1482 aa22.25■■□□□ 1.15
SEC23A-204ENST00000548032 ABCC3O15438 1527 aa22.25■■□□□ 1.15
SEC23A-204ENST00000548032 PTPRTO14522 1441 aa22.24■■□□□ 1.15
SEC23A-204ENST00000548032 NCOA1Q15788 1441 aa22.24■■□□□ 1.15
SEC23A-204ENST00000548032 MYO3AQ8NEV4 1616 aa22.24■■□□□ 1.15
SEC23A-204ENST00000548032 TNRQ92752 1358 aa22.24■■□□□ 1.15
SEC23A-204ENST00000548032 MROH1Q8NDA8 1641 aa22.23■■□□□ 1.15
SEC23A-204ENST00000548032 ITGAEP38570 1179 aa22.22■■□□□ 1.15
SEC23A-204ENST00000548032 ADGRL2O95490 1459 aa22.22■■□□□ 1.15
SEC23A-204ENST00000548032 CEP170BQ9Y4F5 1589 aaPredicted RBP22.2■■□□□ 1.14
SEC23A-204ENST00000548032 CAMSAP1Q5T5Y3 1602 aa22.19■■□□□ 1.14
SEC23A-204ENST00000548032 ZC3H13Q5T200 1668 aaKnown RBP22.19■■□□□ 1.14
SEC23A-204ENST00000548032 KANK1Q14678 1352 aa22.18■■□□□ 1.14
SEC23A-204ENST00000548032 PRDM15P57071 1507 aaPredicted RBP22.17■■□□□ 1.14
SEC23A-204ENST00000548032 A2ML1A8K2U0 1454 aa22.16■■□□□ 1.14
SEC23A-204ENST00000548032 NCKAP5LQ9HCH0 1330 aa22.16■■□□□ 1.14
SEC23A-204ENST00000548032 CEP152O94986 1710 aa22.16■■□□□ 1.14
SEC23A-204ENST00000548032 ZNF142P52746 1687 aaPredicted RBP22.16■■□□□ 1.14
SEC23A-204ENST00000548032 ANKRD50Q9ULJ7 1429 aa22.14■■□□□ 1.14
SEC23A-204ENST00000548032 DEPDC5O75140 1603 aa22.13■■□□□ 1.13
SEC23A-204ENST00000548032 ERVK-7P63135 1459 aa22.12■■□□□ 1.13
SEC23A-204ENST00000548032 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.12■■□□□ 1.13
SEC23A-204ENST00000548032 NLRP1Q9C000 1473 aa22.1■■□□□ 1.13
SEC23A-204ENST00000548032 ROCK1Q13464 1354 aa22.1■■□□□ 1.13
SEC23A-204ENST00000548032 PLA2R1Q13018 1463 aa22.09■■□□□ 1.13
SEC23A-204ENST00000548032 SPATA31D1Q6ZQQ2 1576 aa22.09■■□□□ 1.13
SEC23A-204ENST00000548032 PKD2Q13563 968 aa22.09■■□□□ 1.13
SEC23A-204ENST00000548032 LTBP4Q8N2S1 1624 aa22.09■■□□□ 1.13
SEC23A-204ENST00000548032 ARHGAP31Q2M1Z3 1444 aa22.07■■□□□ 1.12
SEC23A-204ENST00000548032 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
SEC23A-204ENST00000548032 THEMISQ8N1K5 641 aaPredicted RBP22.06■■□□□ 1.12
SEC23A-204ENST00000548032 VWDEQ8N2E2 1590 aa22.05■■□□□ 1.12
SEC23A-204ENST00000548032 UGGT1Q9NYU2 1555 aa22.05■■□□□ 1.12
SEC23A-204ENST00000548032 LMTK2Q8IWU2 1503 aa22.05■■□□□ 1.12
SEC23A-204ENST00000548032 ZNF335Q9H4Z2 1342 aaPredicted RBP22.04■■□□□ 1.12
SEC23A-204ENST00000548032 CFAP65Q6ZU64 1925 aaKnown RBP22.02■■□□□ 1.11
SEC23A-204ENST00000548032 ANKLE2Q86XL3 938 aa22.01■■□□□ 1.11
SEC23A-204ENST00000548032 IQSEC2Q5JU85 1478 aa22.01■■□□□ 1.11
SEC23A-204ENST00000548032 EFCAB6Q5THR3 1501 aa21.99■■□□□ 1.11
SEC23A-204ENST00000548032 DISP3Q9P2K9 1392 aa21.99■■□□□ 1.11
SEC23A-204ENST00000548032 UNC13BO14795 1591 aa21.96■■□□□ 1.11
SEC23A-204ENST00000548032 STAG3Q9UJ98 1225 aa21.96■■□□□ 1.11
SEC23A-204ENST00000548032 NUP155O75694 1391 aa21.95■■□□□ 1.1
SEC23A-204ENST00000548032 UBAP1LF5GYI3 381 aa21.93■■□□□ 1.1
SEC23A-204ENST00000548032 IDI1Q13907 227 aa21.93■■□□□ 1.1
SEC23A-204ENST00000548032 NEURL4Q96JN8 1562 aa21.93■■□□□ 1.1
SEC23A-204ENST00000548032 POLR1AO95602 1720 aaPredicted RBP21.92■■□□□ 1.1
SEC23A-204ENST00000548032 NOS1P29475 1434 aa21.92■■□□□ 1.1
SEC23A-204ENST00000548032 TET3O43151 1660 aa21.91■■□□□ 1.1
SEC23A-204ENST00000548032 NPHP4O75161 1426 aaPredicted RBP21.91■■□□□ 1.1
SEC23A-204ENST00000548032 UBR1Q8IWV7 1749 aa21.91■■□□□ 1.1
SEC23A-204ENST00000548032 SYNMO15061 1565 aa21.91■■□□□ 1.1
SEC23A-204ENST00000548032 RPRD2Q5VT52 1461 aaKnown RBP21.9■■□□□ 1.1
SEC23A-204ENST00000548032 PIK3C2BO00750 1634 aa21.9■■□□□ 1.1
SEC23A-204ENST00000548032 ILDR2Q71H61 639 aa21.89■■□□□ 1.09
SEC23A-204ENST00000548032 TXNDC2Q86VQ3 553 aa21.88■■□□□ 1.09
SEC23A-204ENST00000548032 NAIPQ13075 1403 aa21.88■■□□□ 1.09
SEC23A-204ENST00000548032 IQGAP3Q86VI3 1631 aa21.88■■□□□ 1.09
SEC23A-204ENST00000548032 SLC52A1Q9NWF4 448 aa21.87■■□□□ 1.09
SEC23A-204ENST00000548032 GCC2Q8IWJ2 1684 aa21.86■■□□□ 1.09
SEC23A-204ENST00000548032 MED14O60244 1454 aa21.86■■□□□ 1.09
SEC23A-204ENST00000548032 LTKP29376 864 aa21.86■■□□□ 1.09
SEC23A-204ENST00000548032 EID1Q9Y6B2 187 aa21.86■■□□□ 1.09
SEC23A-204ENST00000548032 SCAF11Q99590 1463 aaKnown RBP21.85■■□□□ 1.09
SEC23A-204ENST00000548032 TMEM2Q9UHN6 1383 aa21.85■■□□□ 1.09
SEC23A-204ENST00000548032 ARHGAP23Q9P227 1491 aa21.84■■□□□ 1.09
SEC23A-204ENST00000548032 SLIT1O75093 1534 aa21.84■■□□□ 1.09
SEC23A-204ENST00000548032 E9PCH4 1651 aa21.82■■□□□ 1.08
SEC23A-204ENST00000548032 HFM1A2PYH4 1435 aa21.82■■□□□ 1.08
SEC23A-204ENST00000548032 ADGRB3O60242 1522 aa21.82■■□□□ 1.08
SEC23A-204ENST00000548032 CHGAP10645 457 aaKnown RBP21.82■■□□□ 1.08
SEC23A-204ENST00000548032 IQGAP1P46940 1657 aa21.82■■□□□ 1.08
SEC23A-204ENST00000548032 TRIM52Q96A61 297 aa21.81■■□□□ 1.08
SEC23A-204ENST00000548032 KDM5AP29375 1690 aaKnown RBP21.77■■□□□ 1.08
SEC23A-204ENST00000548032 SOCS7O14512 581 aa21.77■■□□□ 1.08
SEC23A-204ENST00000548032 CPS1P31327 1500 aa21.76■■□□□ 1.07
SEC23A-204ENST00000548032 TOM1O60784 492 aa21.76■■□□□ 1.07
SEC23A-204ENST00000548032 SCAF1Q9H7N4 1312 aaKnown RBP21.76■■□□□ 1.07
SEC23A-204ENST00000548032 PIP4K2BP78356 416 aa21.75■■□□□ 1.07
SEC23A-204ENST00000548032 BCANQ96GW7 911 aa21.75■■□□□ 1.07
SEC23A-204ENST00000548032 SENP3Q9H4L4 574 aaPredicted RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms