RNA–Protein interactions for RNA: ENST00000548015.1

KRT18-204, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-204ENST00000548015 TCOF1Q13428 1488 aaKnown RBP17.36■□□□□ 0.37
KRT18-204ENST00000548015 MROH2AA6NES4 1674 aa17.36■□□□□ 0.37
KRT18-204ENST00000548015 CLTCQ00610 1675 aaKnown RBP17.33■□□□□ 0.37
KRT18-204ENST00000548015 A2ML1A8K2U0 1454 aa17.33■□□□□ 0.37
KRT18-204ENST00000548015 PZPP20742 1482 aa17.31■□□□□ 0.36
KRT18-204ENST00000548015 MIA2Q96PC5 1412 aa17.31■□□□□ 0.36
KRT18-204ENST00000548015 CEP170BQ9Y4F5 1589 aaPredicted RBP17.31■□□□□ 0.36
KRT18-204ENST00000548015 MAP3K1Q13233 1512 aa17.3■□□□□ 0.36
KRT18-204ENST00000548015 ADGBQ8N7X0 1667 aa17.29■□□□□ 0.36
KRT18-204ENST00000548015 ARHGEF5Q12774 1597 aa17.29■□□□□ 0.36
KRT18-204ENST00000548015 IQSEC2Q5JU85 1478 aa17.29■□□□□ 0.36
KRT18-204ENST00000548015 MYOM3Q5VTT5 1437 aa17.29■□□□□ 0.36
KRT18-204ENST00000548015 ANKLE2Q86XL3 938 aa17.28■□□□□ 0.36
KRT18-204ENST00000548015 THEMISQ8N1K5 641 aaPredicted RBP17.28■□□□□ 0.36
KRT18-204ENST00000548015 UBAP1LF5GYI3 381 aa17.27■□□□□ 0.36
KRT18-204ENST00000548015 MYO3AQ8NEV4 1616 aa17.27■□□□□ 0.36
KRT18-204ENST00000548015 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.27■□□□□ 0.35
KRT18-204ENST00000548015 KDM5DQ9BY66 1539 aa17.26■□□□□ 0.35
KRT18-204ENST00000548015 ILDR2Q71H61 639 aa17.25■□□□□ 0.35
KRT18-204ENST00000548015 DISP3Q9P2K9 1392 aa17.25■□□□□ 0.35
KRT18-204ENST00000548015 FAM135AQ9P2D6 1515 aa17.24■□□□□ 0.35
KRT18-204ENST00000548015 ABCC5O15440 1437 aa17.23■□□□□ 0.35
KRT18-204ENST00000548015 DNMT1P26358 1616 aaKnown RBP17.23■□□□□ 0.35
KRT18-204ENST00000548015 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
KRT18-204ENST00000548015 NLRP1Q9C000 1473 aa17.22■□□□□ 0.35
KRT18-204ENST00000548015 ZNF142P52746 1687 aaPredicted RBP17.22■□□□□ 0.35
KRT18-204ENST00000548015 APLP2Q06481 763 aa17.21■□□□□ 0.35
KRT18-204ENST00000548015 ABCC3O15438 1527 aa17.21■□□□□ 0.34
KRT18-204ENST00000548015 MAST1Q9Y2H9 1570 aa17.19■□□□□ 0.34
KRT18-204ENST00000548015 KIF15Q9NS87 1388 aa17.19■□□□□ 0.34
KRT18-204ENST00000548015 SHANK2Q9UPX8 1470 aa17.18■□□□□ 0.34
KRT18-204ENST00000548015 ERVK-7P63135 1459 aa17.17■□□□□ 0.34
KRT18-204ENST00000548015 NEURL4Q96JN8 1562 aa17.16■□□□□ 0.34
KRT18-204ENST00000548015 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
KRT18-204ENST00000548015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.16■□□□□ 0.342e-10■■□□□ 12.6
KRT18-204ENST00000548015 CHIC2Q9UKJ5 165 aa17.16■□□□□ 0.34
KRT18-204ENST00000548015 MED14O60244 1454 aa17.16■□□□□ 0.34
KRT18-204ENST00000548015 UGGT1Q9NYU2 1555 aa17.15■□□□□ 0.34
KRT18-204ENST00000548015 LTKP29376 864 aa17.15■□□□□ 0.34
KRT18-204ENST00000548015 DUOX2Q9NRD8 1548 aa17.15■□□□□ 0.34
KRT18-204ENST00000548015 RNF17Q9BXT8 1623 aaKnown RBP17.14■□□□□ 0.33
KRT18-204ENST00000548015 FGD6Q6ZV73 1430 aa17.13■□□□□ 0.33
KRT18-204ENST00000548015 TOM1O60784 492 aa17.13■□□□□ 0.33
KRT18-204ENST00000548015 PIP4K2BP78356 416 aa17.13■□□□□ 0.33
KRT18-204ENST00000548015 SPATA31D1Q6ZQQ2 1576 aa17.13■□□□□ 0.33
KRT18-204ENST00000548015 MROH1Q8NDA8 1641 aa17.13■□□□□ 0.33
KRT18-204ENST00000548015 DAPK1P53355 1430 aa17.13■□□□□ 0.33
KRT18-204ENST00000548015 ARHGAP31Q2M1Z3 1444 aa17.13■□□□□ 0.33
KRT18-204ENST00000548015 HSPA1LP34931 641 aa17.12■□□□□ 0.33
KRT18-204ENST00000548015 TXNDC2Q86VQ3 553 aa17.11■□□□□ 0.33
KRT18-204ENST00000548015 ERBINQ96RT1 1412 aa17.11■□□□□ 0.33
KRT18-204ENST00000548015 SOCS7O14512 581 aa17.1■□□□□ 0.33
KRT18-204ENST00000548015 CPS1P31327 1500 aa17.1■□□□□ 0.33
KRT18-204ENST00000548015 VWDEQ8N2E2 1590 aa17.1■□□□□ 0.33
KRT18-204ENST00000548015 IDI1Q13907 227 aa17.09■□□□□ 0.33
KRT18-204ENST00000548015 ANKRD30AQ9BXX3 1397 aa17.09■□□□□ 0.33
KRT18-204ENST00000548015 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
KRT18-204ENST00000548015 EIF2AK4Q9P2K8 1649 aaKnown RBP17.07■□□□□ 0.32
KRT18-204ENST00000548015 PTPN23Q9H3S7 1636 aa17.06■□□□□ 0.32
KRT18-204ENST00000548015 FAM50AQ14320 339 aaKnown RBP17.05■□□□□ 0.32
KRT18-204ENST00000548015 ARHGAP23Q9P227 1491 aa17.05■□□□□ 0.32
KRT18-204ENST00000548015 KANK1Q14678 1352 aa17.04■□□□□ 0.32
KRT18-204ENST00000548015 DEPDC5O75140 1603 aa17.04■□□□□ 0.32
KRT18-204ENST00000548015 EID1Q9Y6B2 187 aa17.04■□□□□ 0.32
KRT18-204ENST00000548015 PRDM15P57071 1507 aaPredicted RBP17.04■□□□□ 0.32
KRT18-204ENST00000548015 SCAF11Q99590 1463 aaKnown RBP17.04■□□□□ 0.32
KRT18-204ENST00000548015 TMEM2Q9UHN6 1383 aa17.03■□□□□ 0.32
KRT18-204ENST00000548015 LRRC7Q96NW7 1537 aa17.02■□□□□ 0.32
KRT18-204ENST00000548015 STAG3Q9UJ98 1225 aa17.01■□□□□ 0.31
KRT18-204ENST00000548015 SLIT1O75093 1534 aa17.01■□□□□ 0.31
KRT18-204ENST00000548015 ZC3H13Q5T200 1668 aaKnown RBP17.01■□□□□ 0.31
KRT18-204ENST00000548015 LMTK2Q8IWU2 1503 aa17■□□□□ 0.31
KRT18-204ENST00000548015 ALKQ9UM73 1620 aa16.99■□□□□ 0.31
KRT18-204ENST00000548015 NOS1P29475 1434 aa16.99■□□□□ 0.31
KRT18-204ENST00000548015 ADGRL2O95490 1459 aa16.99■□□□□ 0.31
KRT18-204ENST00000548015 FOXD1Q16676 465 aa16.98■□□□□ 0.31
KRT18-204ENST00000548015 SLC52A1Q9NWF4 448 aa16.98■□□□□ 0.31
KRT18-204ENST00000548015 ANKRD50Q9ULJ7 1429 aa16.97■□□□□ 0.31
KRT18-204ENST00000548015 SLC26A8Q96RN1 970 aa16.97■□□□□ 0.31
KRT18-204ENST00000548015 POLR1AO95602 1720 aaPredicted RBP16.96■□□□□ 0.31
KRT18-204ENST00000548015 IQGAP1P46940 1657 aa16.95■□□□□ 0.3
KRT18-204ENST00000548015 KCNA6P17658 529 aa16.95■□□□□ 0.3
KRT18-204ENST00000548015 CEP152O94986 1710 aa16.94■□□□□ 0.3
KRT18-204ENST00000548015 UBR1Q8IWV7 1749 aa16.93■□□□□ 0.3
KRT18-204ENST00000548015 CROCC2H7BZ55 1655 aa16.91■□□□□ 0.3
KRT18-204ENST00000548015 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
KRT18-204ENST00000548015 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
KRT18-204ENST00000548015 TMEM94Q12767 1356 aa16.9■□□□□ 0.3
KRT18-204ENST00000548015 STRCP1A6NGW2 1772 aa16.89■□□□□ 0.3
KRT18-204ENST00000548015 PROSER2Q86WR7 435 aaPredicted RBP16.89■□□□□ 0.29
KRT18-204ENST00000548015 SYNMO15061 1565 aa16.89■□□□□ 0.29
KRT18-204ENST00000548015 PPARGC1BQ86YN6 1023 aaKnown RBP16.88■□□□□ 0.29
KRT18-204ENST00000548015 PIK3C2BO00750 1634 aa16.88■□□□□ 0.29
KRT18-204ENST00000548015 ROCK1Q13464 1354 aa16.88■□□□□ 0.29
KRT18-204ENST00000548015 TET3O43151 1660 aa16.87■□□□□ 0.29
KRT18-204ENST00000548015 RPRD2Q5VT52 1461 aaKnown RBP16.86■□□□□ 0.29
KRT18-204ENST00000548015 CFAP65Q6ZU64 1925 aaKnown RBP16.86■□□□□ 0.29
KRT18-204ENST00000548015 BCANQ96GW7 911 aa16.86■□□□□ 0.29
KRT18-204ENST00000548015 FAM135BQ49AJ0 1406 aa16.86■□□□□ 0.29
KRT18-204ENST00000548015 ZFYVE9O95405 1425 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms