RNA–Protein interactions for RNA: ENST00000547939.5

TUBA1A-204, Transcript of tubulin alpha 1a, humanhuman

TSL 3

Gene TUBA1A, Length 946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-204ENST00000547939 PHF23Q9BUL5 403 aaPredicted RBP16.45■□□□□ 0.22
TUBA1A-204ENST00000547939 ZMYM3Q14202 1370 aa16.45■□□□□ 0.22
TUBA1A-204ENST00000547939 VWDEQ8N2E2 1590 aa16.45■□□□□ 0.22
TUBA1A-204ENST00000547939 SETD1AO15047 1707 aaKnown RBP16.45■□□□□ 0.22
TUBA1A-204ENST00000547939 TIAM1Q13009 1591 aa16.44■□□□□ 0.22
TUBA1A-204ENST00000547939 PTPRKQ15262 1439 aa16.44■□□□□ 0.22
TUBA1A-204ENST00000547939 LRRC9Q6ZRR7 1453 aa16.43■□□□□ 0.22
TUBA1A-204ENST00000547939 SRCAPQ6ZRS2 3230 aa16.43■□□□□ 0.22
TUBA1A-204ENST00000547939 TSPY4P0CV99 314 aa16.42■□□□□ 0.22
TUBA1A-204ENST00000547939 TSPY10P0CW01 314 aa16.42■□□□□ 0.22
TUBA1A-204ENST00000547939 KANK4Q5T7N3 995 aaPredicted RBP16.42■□□□□ 0.22
TUBA1A-204ENST00000547939 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
TUBA1A-204ENST00000547939 SHANK2Q9UPX8 1470 aa16.42■□□□□ 0.22
TUBA1A-204ENST00000547939 MAP3K1Q13233 1512 aa16.41■□□□□ 0.22
TUBA1A-204ENST00000547939 MBD5Q9P267 1494 aa16.41■□□□□ 0.22
TUBA1A-204ENST00000547939 ATP7AQ04656 1500 aa16.4■□□□□ 0.22
TUBA1A-204ENST00000547939 TOM1O60784 492 aa16.4■□□□□ 0.22
TUBA1A-204ENST00000547939 PLXNC1O60486 1568 aa16.39■□□□□ 0.21
TUBA1A-204ENST00000547939 RTEL1-TNFRSF6BF6WH68 1400 aa16.39■□□□□ 0.21
TUBA1A-204ENST00000547939 A2MP01023 1474 aa16.39■□□□□ 0.21
TUBA1A-204ENST00000547939 GGT6Q6P531 493 aa16.38■□□□□ 0.21
TUBA1A-204ENST00000547939 A2ML1A8K2U0 1454 aa16.36■□□□□ 0.21
TUBA1A-204ENST00000547939 CAMSAP2Q08AD1 1489 aa16.36■□□□□ 0.21
TUBA1A-204ENST00000547939 CCDC141Q6ZP82 1450 aa16.36■□□□□ 0.21
TUBA1A-204ENST00000547939 XIRP1Q702N8 1843 aaKnown RBP16.35■□□□□ 0.21
TUBA1A-204ENST00000547939 DHX29Q7Z478 1369 aaKnown RBP16.35■□□□□ 0.21
TUBA1A-204ENST00000547939 INO80Q9ULG1 1556 aaPredicted RBP16.34■□□□□ 0.21
TUBA1A-204ENST00000547939 RNF17Q9BXT8 1623 aaKnown RBP16.34■□□□□ 0.21
TUBA1A-204ENST00000547939 MIA2Q96PC5 1412 aa16.33■□□□□ 0.2
TUBA1A-204ENST00000547939 KIF3BO15066 747 aa16.32■□□□□ 0.2
TUBA1A-204ENST00000547939 MYOM3Q5VTT5 1437 aa16.32■□□□□ 0.2
TUBA1A-204ENST00000547939 POTEAQ6S8J7 498 aa16.31■□□□□ 0.2
TUBA1A-204ENST00000547939 SENP3Q9H4L4 574 aaPredicted RBP16.29■□□□□ 0.2
TUBA1A-204ENST00000547939 LRRC7Q96NW7 1537 aa16.29■□□□□ 0.2
TUBA1A-204ENST00000547939 DEPDC5O75140 1603 aa16.28■□□□□ 0.2
TUBA1A-204ENST00000547939 SYNMO15061 1565 aa16.28■□□□□ 0.2
TUBA1A-204ENST00000547939 IQGAP1P46940 1657 aa16.27■□□□□ 0.2
TUBA1A-204ENST00000547939 ARHGEF5Q12774 1597 aa16.27■□□□□ 0.2
TUBA1A-204ENST00000547939 WASHC2CQ9Y4E1 1318 aa16.26■□□□□ 0.19
TUBA1A-204ENST00000547939 MED14O60244 1454 aa16.26■□□□□ 0.19
TUBA1A-204ENST00000547939 ADGBQ8N7X0 1667 aa16.26■□□□□ 0.19
TUBA1A-204ENST00000547939 ZC3H13Q5T200 1668 aaKnown RBP16.24■□□□□ 0.19
TUBA1A-204ENST00000547939 NPHP4O75161 1426 aaPredicted RBP16.19■□□□□ 0.18
TUBA1A-204ENST00000547939 FGD6Q6ZV73 1430 aa16.19■□□□□ 0.18
TUBA1A-204ENST00000547939 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.19■□□□□ 0.18
TUBA1A-204ENST00000547939 RRP7BPQ9NSQ0 103 aa16.18■□□□□ 0.18
TUBA1A-204ENST00000547939 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
TUBA1A-204ENST00000547939 ABCC5O15440 1437 aa16.17■□□□□ 0.18
TUBA1A-204ENST00000547939 FAM135AQ9P2D6 1515 aa16.16■□□□□ 0.18
TUBA1A-204ENST00000547939 FAM50AQ14320 339 aaKnown RBP16.16■□□□□ 0.18
TUBA1A-204ENST00000547939 FBXO31Q5XUX0 539 aaPredicted RBP16.16■□□□□ 0.18
TUBA1A-204ENST00000547939 TNRQ92752 1358 aa16.15■□□□□ 0.18
TUBA1A-204ENST00000547939 KIF15Q9NS87 1388 aa16.15■□□□□ 0.18
TUBA1A-204ENST00000547939 KDM5DQ9BY66 1539 aa16.15■□□□□ 0.18
TUBA1A-204ENST00000547939 CHIC2Q9UKJ5 165 aa16.15■□□□□ 0.18
TUBA1A-204ENST00000547939 PTPN23Q9H3S7 1636 aa16.15■□□□□ 0.18
TUBA1A-204ENST00000547939 PZPP20742 1482 aa16.15■□□□□ 0.18
TUBA1A-204ENST00000547939 UGGT1Q9NYU2 1555 aa16.14■□□□□ 0.17
TUBA1A-204ENST00000547939 DAPK1P53355 1430 aa16.14■□□□□ 0.17
TUBA1A-204ENST00000547939 DUOX2Q9NRD8 1548 aa16.14■□□□□ 0.17
TUBA1A-204ENST00000547939 ANKRD30AQ9BXX3 1397 aa16.13■□□□□ 0.17
TUBA1A-204ENST00000547939 ROBO1Q9Y6N7 1651 aa16.12■□□□□ 0.17
TUBA1A-204ENST00000547939 ANKLE2Q86XL3 938 aa16.12■□□□□ 0.17
TUBA1A-204ENST00000547939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.17
TUBA1A-204ENST00000547939 CFAP65Q6ZU64 1925 aaKnown RBP16.11■□□□□ 0.17
TUBA1A-204ENST00000547939 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
TUBA1A-204ENST00000547939 ERBINQ96RT1 1412 aa16.1■□□□□ 0.17
TUBA1A-204ENST00000547939 UPF1Q92900 1129 aaKnown RBP eCLIP16.09■□□□□ 0.17
TUBA1A-204ENST00000547939 KANK1Q14678 1352 aa16.09■□□□□ 0.17
TUBA1A-204ENST00000547939 NLRP1Q9C000 1473 aa16.09■□□□□ 0.17
TUBA1A-204ENST00000547939 FAM135BQ49AJ0 1406 aa16.08■□□□□ 0.16
TUBA1A-204ENST00000547939 UBR1Q8IWV7 1749 aa16.08■□□□□ 0.16
TUBA1A-204ENST00000547939 EIF2AK4Q9P2K8 1649 aaKnown RBP16.07■□□□□ 0.16
TUBA1A-204ENST00000547939 ABCC3O15438 1527 aa16.05■□□□□ 0.16
TUBA1A-204ENST00000547939 PHLPP1O60346 1717 aa16.03■□□□□ 0.16
TUBA1A-204ENST00000547939 PPARGC1BQ86YN6 1023 aaKnown RBP16.03■□□□□ 0.16
TUBA1A-204ENST00000547939 CROCC2H7BZ55 1655 aa16■□□□□ 0.15
TUBA1A-204ENST00000547939 ADGRL2O95490 1459 aa16■□□□□ 0.15
TUBA1A-204ENST00000547939 LRP6O75581 1613 aa16■□□□□ 0.15
TUBA1A-204ENST00000547939 ARHGAP31Q2M1Z3 1444 aa16■□□□□ 0.15
TUBA1A-204ENST00000547939 ERVK-7P63135 1459 aa15.99■□□□□ 0.15
TUBA1A-204ENST00000547939 ANKRD50Q9ULJ7 1429 aa15.99■□□□□ 0.15
TUBA1A-204ENST00000547939 COL16A1Q07092 1604 aaPredicted RBP15.98■□□□□ 0.15
TUBA1A-204ENST00000547939 ITGAEP38570 1179 aa15.98■□□□□ 0.15
TUBA1A-204ENST00000547939 STAG3Q9UJ98 1225 aa15.98■□□□□ 0.15
TUBA1A-204ENST00000547939 PRDM15P57071 1507 aaPredicted RBP15.98■□□□□ 0.15
TUBA1A-204ENST00000547939 MROH1Q8NDA8 1641 aa15.97■□□□□ 0.15
TUBA1A-204ENST00000547939 SCAF11Q99590 1463 aaKnown RBP15.97■□□□□ 0.15
TUBA1A-204ENST00000547939 ARHGAP23Q9P227 1491 aa15.97■□□□□ 0.15
TUBA1A-204ENST00000547939 ROCK1Q13464 1354 aa15.95■□□□□ 0.14
TUBA1A-204ENST00000547939 SLIT1O75093 1534 aa15.94■□□□□ 0.14
TUBA1A-204ENST00000547939 CEP152O94986 1710 aa15.94■□□□□ 0.14
TUBA1A-204ENST00000547939 LTKP29376 864 aa15.93■□□□□ 0.14
TUBA1A-204ENST00000547939 EID1Q9Y6B2 187 aa15.93■□□□□ 0.14
TUBA1A-204ENST00000547939 LMTK2Q8IWU2 1503 aa15.92■□□□□ 0.14
TUBA1A-204ENST00000547939 TMEM94Q12767 1356 aa15.91■□□□□ 0.14
TUBA1A-204ENST00000547939 TXNDC2Q86VQ3 553 aa15.91■□□□□ 0.14
TUBA1A-204ENST00000547939 SLC52A1Q9NWF4 448 aa15.91■□□□□ 0.14
TUBA1A-204ENST00000547939 EP400Q96L91 3159 aa15.9■□□□□ 0.14
TUBA1A-204ENST00000547939 SHPRHQ149N8 1683 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms