RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 PCGF6Q9BYE7 350 aa15.37■□□□□ 0.05
CDK4-205ENST00000547853 PLEKHH2Q8IVE3 1493 aa15.37■□□□□ 0.05
CDK4-205ENST00000547853 FYCO1Q9BQS8 1478 aa15.37■□□□□ 0.05
CDK4-205ENST00000547853 KDM5DQ9BY66 1539 aa15.37■□□□□ 0.05
CDK4-205ENST00000547853 ZC3H13Q5T200 1668 aaKnown RBP15.36■□□□□ 0.05
CDK4-205ENST00000547853 MED14O60244 1454 aa15.36■□□□□ 0.05
CDK4-205ENST00000547853 PZPP20742 1482 aa15.36■□□□□ 0.05
CDK4-205ENST00000547853 PHF23Q9BUL5 403 aaPredicted RBP15.36■□□□□ 0.05
CDK4-205ENST00000547853 XIRP1Q702N8 1843 aaKnown RBP15.35■□□□□ 0.05
CDK4-205ENST00000547853 SETD1AO15047 1707 aaKnown RBP15.32■□□□□ 0.04
CDK4-205ENST00000547853 TNRQ92752 1358 aa15.32■□□□□ 0.04
CDK4-205ENST00000547853 LRRC7Q96NW7 1537 aa15.32■□□□□ 0.04
CDK4-205ENST00000547853 TIAM1Q13009 1591 aa15.32■□□□□ 0.04
CDK4-205ENST00000547853 NPHP4O75161 1426 aaPredicted RBP15.31■□□□□ 0.04
CDK4-205ENST00000547853 UGGT1Q9NYU2 1555 aa15.31■□□□□ 0.04
CDK4-205ENST00000547853 TRIM26Q12899 539 aaPredicted RBP15.3■□□□□ 0.04
CDK4-205ENST00000547853 NLRP1Q9C000 1473 aa15.3■□□□□ 0.04
CDK4-205ENST00000547853 HNRNPMP52272 730 aaKnown RBP eCLIP15.29■□□□□ 0.04
CDK4-205ENST00000547853 GGT6Q6P531 493 aa15.29■□□□□ 0.04
CDK4-205ENST00000547853 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
CDK4-205ENST00000547853 ZNF777Q9ULD5 760 aaPredicted RBP15.28■□□□□ 0.04
CDK4-205ENST00000547853 MBD5Q9P267 1494 aa15.27■□□□□ 0.04
CDK4-205ENST00000547853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.27■□□□□ 0.04
CDK4-205ENST00000547853 RGS17Q9UGC6 210 aaPredicted RBP15.26■□□□□ 0.03
CDK4-205ENST00000547853 UBR1Q8IWV7 1749 aa15.26■□□□□ 0.03
CDK4-205ENST00000547853 ZEB1P37275 1124 aaPredicted RBP15.25■□□□□ 0.03
CDK4-205ENST00000547853 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
CDK4-205ENST00000547853 RTEL1-TNFRSF6BF6WH68 1400 aa15.24■□□□□ 0.03
CDK4-205ENST00000547853 FBXO31Q5XUX0 539 aaPredicted RBP15.23■□□□□ 0.03
CDK4-205ENST00000547853 DHX29Q7Z478 1369 aaKnown RBP15.22■□□□□ 0.03
CDK4-205ENST00000547853 MIA2Q96PC5 1412 aa15.21■□□□□ 0.03
CDK4-205ENST00000547853 EHBP1L1Q8N3D4 1523 aa15.21■□□□□ 0.03
CDK4-205ENST00000547853 CCNB3Q8WWL7 1395 aa15.21■□□□□ 0.02
CDK4-205ENST00000547853 ANKLE2Q86XL3 938 aa15.2■□□□□ 0.02
CDK4-205ENST00000547853 CFDP1Q9UEE9 299 aaPredicted RBP15.2■□□□□ 0.02
CDK4-205ENST00000547853 ABCC3O15438 1527 aa15.2■□□□□ 0.02
CDK4-205ENST00000547853 MROH1Q8NDA8 1641 aa15.19■□□□□ 0.02
CDK4-205ENST00000547853 SENP3Q9H4L4 574 aaPredicted RBP15.19■□□□□ 0.02
CDK4-205ENST00000547853 CEP152O94986 1710 aa15.19■□□□□ 0.02
CDK4-205ENST00000547853 CCDC141Q6ZP82 1450 aa15.19■□□□□ 0.02
CDK4-205ENST00000547853 ROBO1Q9Y6N7 1651 aa15.19■□□□□ 0.02
CDK4-205ENST00000547853 ERVK-7P63135 1459 aa15.17■□□□□ 0.02
CDK4-205ENST00000547853 EIF2AK4Q9P2K8 1649 aaKnown RBP15.17■□□□□ 0.02
CDK4-205ENST00000547853 LOC105371045A0A1W2PR82 267 aa15.16■□□□□ 0.02
CDK4-205ENST00000547853 THEMISQ8N1K5 641 aaPredicted RBP15.16■□□□□ 0.02
CDK4-205ENST00000547853 ZNF644Q9H582 1327 aaPredicted RBP15.16■□□□□ 0.02
CDK4-205ENST00000547853 CAMSAP2Q08AD1 1489 aa15.15■□□□□ 0.02
CDK4-205ENST00000547853 SCAF11Q99590 1463 aaKnown RBP15.15■□□□□ 0.02
CDK4-205ENST00000547853 ARHGEF5Q12774 1597 aa15.15■□□□□ 0.02
CDK4-205ENST00000547853 SLIT1O75093 1534 aa15.14■□□□□ 0.01
CDK4-205ENST00000547853 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
CDK4-205ENST00000547853 NCOA2Q15596 1464 aa15.14■□□□□ 0.01
CDK4-205ENST00000547853 ARHGAP23Q9P227 1491 aa15.14■□□□□ 0.01
CDK4-205ENST00000547853 POTEAQ6S8J7 498 aa15.13■□□□□ 0.01
CDK4-205ENST00000547853 CFAP65Q6ZU64 1925 aaKnown RBP15.13■□□□□ 0.01
CDK4-205ENST00000547853 KIF3BO15066 747 aa15.12■□□□□ 0.01
CDK4-205ENST00000547853 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
CDK4-205ENST00000547853 CEP162Q5TB80 1403 aa15.11■□□□□ 0.01
CDK4-205ENST00000547853 WASHC2CQ9Y4E1 1318 aa15.11■□□□□ 0.01
CDK4-205ENST00000547853 MAST1Q9Y2H9 1570 aa15.11■□□□□ 0.01
CDK4-205ENST00000547853 FAM135BQ49AJ0 1406 aa15.1■□□□□ 0.01
CDK4-205ENST00000547853 NWD1Q149M9 1564 aa15.09■□□□□ 0.01
CDK4-205ENST00000547853 PIK3C2BO00750 1634 aa15.09■□□□□ 0.01
CDK4-205ENST00000547853 PHLPP1O60346 1717 aa15.09■□□□□ 0.01
CDK4-205ENST00000547853 KDM5AP29375 1690 aaKnown RBP15.08■□□□□ 0
CDK4-205ENST00000547853 LRRC9Q6ZRR7 1453 aa15.08■□□□□ 0
CDK4-205ENST00000547853 PRDM15P57071 1507 aaPredicted RBP15.06■□□□□ 0
CDK4-205ENST00000547853 COL16A1Q07092 1604 aaPredicted RBP15.06■□□□□ 0
CDK4-205ENST00000547853 NKTRP30414 1462 aaKnown RBP15.02■□□□□ -0
CDK4-205ENST00000547853 TMEM94Q12767 1356 aa15.01□□□□□ -0.01
CDK4-205ENST00000547853 LRP6O75581 1613 aa15.01□□□□□ -0.01
CDK4-205ENST00000547853 TET3O43151 1660 aa15□□□□□ -0.01
CDK4-205ENST00000547853 LTKP29376 864 aa15□□□□□ -0.01
CDK4-205ENST00000547853 SRCAPQ6ZRS2 3230 aa15□□□□□ -0.01
CDK4-205ENST00000547853 CROCC2H7BZ55 1655 aa15□□□□□ -0.01
CDK4-205ENST00000547853 SHPRHQ149N8 1683 aa15□□□□□ -0.01
CDK4-205ENST00000547853 ARHGAP31Q2M1Z3 1444 aa14.98□□□□□ -0.01
CDK4-205ENST00000547853 EFCAB6Q5THR3 1501 aa14.97□□□□□ -0.01
CDK4-205ENST00000547853 PPARGC1BQ86YN6 1023 aaKnown RBP14.96□□□□□ -0.01
CDK4-205ENST00000547853 TMEM2Q9UHN6 1383 aa14.96□□□□□ -0.02
CDK4-205ENST00000547853 ADGRB3O60242 1522 aa14.95□□□□□ -0.02
CDK4-205ENST00000547853 DUOX2Q9NRD8 1548 aa14.95□□□□□ -0.02
CDK4-205ENST00000547853 JCADQ9P266 1359 aa14.95□□□□□ -0.02
CDK4-205ENST00000547853 CHD2O14647 1828 aaKnown RBP14.94□□□□□ -0.02
CDK4-205ENST00000547853 RSPH4AQ5TD94 716 aa14.94□□□□□ -0.02
CDK4-205ENST00000547853 AHDC1Q5TGY3 1603 aaPredicted RBP14.94□□□□□ -0.02
CDK4-205ENST00000547853 TXNDC2Q86VQ3 553 aa14.93□□□□□ -0.02
CDK4-205ENST00000547853 MYO5BQ9ULV0 1848 aa14.93□□□□□ -0.02
CDK4-205ENST00000547853 UPF1Q92900 1129 aaKnown RBP eCLIP14.92□□□□□ -0.02
CDK4-205ENST00000547853 DIP2AQ14689 1571 aa14.91□□□□□ -0.02
CDK4-205ENST00000547853 FGD6Q6ZV73 1430 aa14.91□□□□□ -0.02
CDK4-205ENST00000547853 CDK12Q9NYV4 1490 aaPredicted RBP14.9□□□□□ -0.02
CDK4-205ENST00000547853 MSH6P52701 1360 aa14.88□□□□□ -0.03
CDK4-205ENST00000547853 LMTK2Q8IWU2 1503 aa14.88□□□□□ -0.03
CDK4-205ENST00000547853 KCNA6P17658 529 aa14.88□□□□□ -0.03
CDK4-205ENST00000547853 EID1Q9Y6B2 187 aa14.88□□□□□ -0.03
CDK4-205ENST00000547853 ERBINQ96RT1 1412 aa14.88□□□□□ -0.03
CDK4-205ENST00000547853 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.88□□□□□ -0.03
CDK4-205ENST00000547853 GCC2Q8IWJ2 1684 aa14.87□□□□□ -0.03
CDK4-205ENST00000547853 RBM33Q96EV2 1170 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms