RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
RBFOX1-208ENST00000547372 FGD5Q6ZNL6 1462 aa15.24■□□□□ 0.03
RBFOX1-208ENST00000547372 PDIA4P13667 645 aaKnown RBP15.23■□□□□ 0.03
RBFOX1-208ENST00000547372 MIA2Q96PC5 1412 aa15.23■□□□□ 0.03
RBFOX1-208ENST00000547372 KDM2BQ8NHM5 1336 aa15.23■□□□□ 0.03
RBFOX1-208ENST00000547372 MSNP26038 577 aaKnown RBP15.23■□□□□ 0.03
RBFOX1-208ENST00000547372 RALBP1Q15311 655 aa15.22■□□□□ 0.03
RBFOX1-208ENST00000547372 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.22■□□□□ 0.03
RBFOX1-208ENST00000547372 RGL3Q3MIN7 710 aa15.22■□□□□ 0.03
RBFOX1-208ENST00000547372 HECW1Q76N89 1606 aa15.21■□□□□ 0.03
RBFOX1-208ENST00000547372 RPRD2Q5VT52 1461 aaKnown RBP15.21■□□□□ 0.03
RBFOX1-208ENST00000547372 WDR43Q15061 677 aaKnown RBP eCLIP15.21■□□□□ 0.03
RBFOX1-208ENST00000547372 ANKRD30BQ9BXX2 1392 aa15.21■□□□□ 0.02
RBFOX1-208ENST00000547372 ANP32BQ92688 251 aaKnown RBP15.21■□□□□ 0.02
RBFOX1-208ENST00000547372 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
RBFOX1-208ENST00000547372 FSD2A1L4K1 749 aa15.2■□□□□ 0.02
RBFOX1-208ENST00000547372 TEX14Q8IWB6 1497 aa15.19■□□□□ 0.02
RBFOX1-208ENST00000547372 ROCK2O75116 1388 aaKnown RBP15.19■□□□□ 0.02
RBFOX1-208ENST00000547372 POLR1AO95602 1720 aaPredicted RBP15.19■□□□□ 0.02
RBFOX1-208ENST00000547372 NLRP13Q86W25 1043 aa15.18■□□□□ 0.02
RBFOX1-208ENST00000547372 TBC1D2Q9BYX2 928 aa15.18■□□□□ 0.02
RBFOX1-208ENST00000547372 PLCD3Q8N3E9 789 aa15.17■□□□□ 0.02
RBFOX1-208ENST00000547372 CFTRP13569 1480 aa15.17■□□□□ 0.02
RBFOX1-208ENST00000547372 KDM6BO15054 1643 aa15.16■□□□□ 0.02
RBFOX1-208ENST00000547372 VGLL3A8MV65 326 aa15.16■□□□□ 0.02
RBFOX1-208ENST00000547372 TNNT2P45379 298 aaPredicted RBP15.16■□□□□ 0.02
RBFOX1-208ENST00000547372 NAP1L2Q9ULW6 460 aaPredicted RBP15.16■□□□□ 0.02
RBFOX1-208ENST00000547372 RIPK4P57078 832 aa15.15■□□□□ 0.02
RBFOX1-208ENST00000547372 FOXD4L1Q9NU39 408 aa15.14■□□□□ 0.01
RBFOX1-208ENST00000547372 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
RBFOX1-208ENST00000547372 BCORL1Q5H9F3 1711 aa15.14■□□□□ 0.01
RBFOX1-208ENST00000547372 UQCRHLA0A096LP55 91 aa15.14■□□□□ 0.01
RBFOX1-208ENST00000547372 UQCRHP07919 91 aa15.14■□□□□ 0.01
RBFOX1-208ENST00000547372 XPCQ01831 940 aaPredicted RBP15.13■□□□□ 0.01
RBFOX1-208ENST00000547372 NEUROD2Q15784 382 aa15.13■□□□□ 0.01
RBFOX1-208ENST00000547372 GAS2L3Q86XJ1 694 aa15.13■□□□□ 0.01
RBFOX1-208ENST00000547372 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
RBFOX1-208ENST00000547372 NCLP19338 710 aaKnown RBP15.12■□□□□ 0.01
RBFOX1-208ENST00000547372 ANTXR1Q9H6X2 564 aa15.12■□□□□ 0.01
RBFOX1-208ENST00000547372 CENPJQ9HC77 1338 aaPredicted RBP15.12■□□□□ 0.01
RBFOX1-208ENST00000547372 USP19O94966 1318 aa15.11■□□□□ 0.01
RBFOX1-208ENST00000547372 IGHDP01880 384 aa15.1■□□□□ 0.01
RBFOX1-208ENST00000547372 ST20-MTHFSA0A0A6YYL1 179 aa15.1■□□□□ 0.01
RBFOX1-208ENST00000547372 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.1■□□□□ 0.01
RBFOX1-208ENST00000547372 GCC2Q8IWJ2 1684 aa15.1■□□□□ 0.01
RBFOX1-208ENST00000547372 MFAP1P55081 439 aaKnown RBP15.09■□□□□ 0.01
RBFOX1-208ENST00000547372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.01
RBFOX1-208ENST00000547372 CHMP5Q9NZZ3 219 aa15.09■□□□□ 0.01
RBFOX1-208ENST00000547372 IGSF3O75054 1194 aa15.09■□□□□ 0.01
RBFOX1-208ENST00000547372 CBX1P83916 185 aa15.09■□□□□ 0.01
RBFOX1-208ENST00000547372 ZSCAN30Q86W11 494 aa15.09■□□□□ 0.01
RBFOX1-208ENST00000547372 SUPT6HQ7KZ85 1726 aaKnown RBP15.08■□□□□ 0.01
RBFOX1-208ENST00000547372 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0.01
RBFOX1-208ENST00000547372 DNTTIP2Q5QJE6 756 aaKnown RBP15.08■□□□□ 0
RBFOX1-208ENST00000547372 MAP7D2Q96T17 732 aa15.08■□□□□ 0
RBFOX1-208ENST00000547372 GTF2E1P29083 439 aaPredicted RBP15.08■□□□□ 0
RBFOX1-208ENST00000547372 NASPP49321 788 aaPredicted RBP15.08■□□□□ 0
RBFOX1-208ENST00000547372 OFD1O75665 1012 aa15.07■□□□□ 0
RBFOX1-208ENST00000547372 PKD2Q13563 968 aa15.07■□□□□ 0
RBFOX1-208ENST00000547372 PAXIP1Q6ZW49 1069 aaPredicted RBP15.07■□□□□ 0
RBFOX1-208ENST00000547372 SMAP1Q8IYB5 467 aaPredicted RBP15.06■□□□□ 0
RBFOX1-208ENST00000547372 BCAR3O75815 825 aa15.05■□□□□ 0
RBFOX1-208ENST00000547372 DDX11L8A8MPP1 907 aa15.04■□□□□ -0
RBFOX1-208ENST00000547372 STAC3Q96MF2 364 aa15.04■□□□□ -0
RBFOX1-208ENST00000547372 EHBP1L1Q8N3D4 1523 aa15.04■□□□□ -0
RBFOX1-208ENST00000547372 COG6Q9Y2V7 657 aa15.04■□□□□ -0
RBFOX1-208ENST00000547372 TSC1Q92574 1164 aa15.03■□□□□ -0
RBFOX1-208ENST00000547372 UGGT2Q9NYU1 1516 aa15.03■□□□□ -0
RBFOX1-208ENST00000547372 CDK11BP21127 795 aaKnown RBP15.03■□□□□ -0
RBFOX1-208ENST00000547372 HSCBQ8IWL3 235 aa15.03■□□□□ -0
RBFOX1-208ENST00000547372 PPP4R3BQ5MIZ7 849 aa15.02■□□□□ -0
RBFOX1-208ENST00000547372 MPNDQ8N594 471 aa15.02■□□□□ -0
RBFOX1-208ENST00000547372 JARID2Q92833 1246 aaPredicted RBP15.02■□□□□ -0
RBFOX1-208ENST00000547372 TCOF1Q13428 1488 aaKnown RBP15.01□□□□□ -0.01
RBFOX1-208ENST00000547372 PARD3Q8TEW0 1356 aa15.01□□□□□ -0.01
RBFOX1-208ENST00000547372 CCDC146Q8IYE0 955 aa15.01□□□□□ -0.01
RBFOX1-208ENST00000547372 ADAMTS8Q9UP79 889 aa15.01□□□□□ -0.01
RBFOX1-208ENST00000547372 CC2D2AQ9P2K1 1620 aa15.01□□□□□ -0.01
RBFOX1-208ENST00000547372 FAM177BA6PVY3 158 aa15.01□□□□□ -0.01
RBFOX1-208ENST00000547372 KDM5CP41229 1560 aa15.01□□□□□ -0.01
RBFOX1-208ENST00000547372 CCDC173Q0VFZ6 552 aa15□□□□□ -0.01
RBFOX1-208ENST00000547372 PANK1Q8TE04 598 aa15□□□□□ -0.01
RBFOX1-208ENST00000547372 KNSTRNQ9Y448 316 aa15□□□□□ -0.01
RBFOX1-208ENST00000547372 DUSP27Q5VZP5 1158 aa15□□□□□ -0.01
RBFOX1-208ENST00000547372 ZBTB22O15209 634 aa15□□□□□ -0.01
RBFOX1-208ENST00000547372 MAPK8IP3Q9UPT6 1336 aa14.99□□□□□ -0.01
RBFOX1-208ENST00000547372 TBC1D32Q96NH3 1257 aa14.99□□□□□ -0.01
RBFOX1-208ENST00000547372 HSP90AB1P08238 724 aaKnown RBP14.99□□□□□ -0.01
RBFOX1-208ENST00000547372 DDX49Q9Y6V7 483 aaKnown RBP14.99□□□□□ -0.01
RBFOX1-208ENST00000547372 SPDYE4A6NLX3 237 aa14.98□□□□□ -0.01
RBFOX1-208ENST00000547372 GOLGA2Q08379 1002 aa14.98□□□□□ -0.01
RBFOX1-208ENST00000547372 C22orf23Q9BZE7 217 aa14.98□□□□□ -0.01
RBFOX1-208ENST00000547372 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
RBFOX1-208ENST00000547372 CLUAP1Q96AJ1 413 aa14.97□□□□□ -0.01
RBFOX1-208ENST00000547372 THOC2Q8NI27 1593 aaKnown RBP14.97□□□□□ -0.01
RBFOX1-208ENST00000547372 BLMP54132 1417 aaPredicted RBP14.97□□□□□ -0.01
RBFOX1-208ENST00000547372 TNPO1Q92973 898 aaKnown RBP14.97□□□□□ -0.01
RBFOX1-208ENST00000547372 GBP4Q96PP9 640 aa14.97□□□□□ -0.01
RBFOX1-208ENST00000547372 MBD5Q9P267 1494 aa14.97□□□□□ -0.01
RBFOX1-208ENST00000547372 DMTNQ08495 405 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms