RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 PLA2R1Q13018 1463 aa29.48■■■□□ 2.31
GCN1-203ENST00000547369 FAM135AQ9P2D6 1515 aa29.48■■■□□ 2.31
GCN1-203ENST00000547369 KDM5DQ9BY66 1539 aa29.47■■■□□ 2.31
GCN1-203ENST00000547369 PKD2Q13563 968 aa29.45■■■□□ 2.31
GCN1-203ENST00000547369 WASHC2CQ9Y4E1 1318 aa29.44■■■□□ 2.3
GCN1-203ENST00000547369 A2ML1A8K2U0 1454 aa29.43■■■□□ 2.3
GCN1-203ENST00000547369 MYOM3Q5VTT5 1437 aa29.43■■■□□ 2.3
GCN1-203ENST00000547369 MAST1Q9Y2H9 1570 aa29.43■■■□□ 2.3
GCN1-203ENST00000547369 TCOF1Q13428 1488 aaKnown RBP29.42■■■□□ 2.3
GCN1-203ENST00000547369 FBXO31Q5XUX0 539 aaPredicted RBP29.42■■■□□ 2.3
GCN1-203ENST00000547369 MIA2Q96PC5 1412 aa29.42■■■□□ 2.3
GCN1-203ENST00000547369 PZPP20742 1482 aa29.42■■■□□ 2.3
GCN1-203ENST00000547369 TNRQ92752 1358 aa29.4■■■□□ 2.3
GCN1-203ENST00000547369 DNMT1P26358 1616 aaKnown RBP29.4■■■□□ 2.3
GCN1-203ENST00000547369 IQSEC2Q5JU85 1478 aa29.38■■■□□ 2.29
GCN1-203ENST00000547369 ZNF335Q9H4Z2 1342 aaPredicted RBP29.35■■■□□ 2.29
GCN1-203ENST00000547369 RNF17Q9BXT8 1623 aaKnown RBP29.34■■■□□ 2.29
GCN1-203ENST00000547369 EIF2AK4Q9P2K8 1649 aaKnown RBP29.31■■■□□ 2.28
GCN1-203ENST00000547369 APLP2Q06481 763 aa29.31■■■□□ 2.28
GCN1-203ENST00000547369 ABCC3O15438 1527 aa29.28■■■□□ 2.28
GCN1-203ENST00000547369 ZC3H13Q5T200 1668 aaKnown RBP29.28■■■□□ 2.28
GCN1-203ENST00000547369 POLR1AO95602 1720 aaPredicted RBP29.27■■■□□ 2.28
GCN1-203ENST00000547369 NLRP1Q9C000 1473 aa29.27■■■□□ 2.28
GCN1-203ENST00000547369 DUOX2Q9NRD8 1548 aa29.25■■■□□ 2.27
GCN1-203ENST00000547369 MROH1Q8NDA8 1641 aa29.23■■■□□ 2.27
GCN1-203ENST00000547369 PTPN23Q9H3S7 1636 aa29.23■■■□□ 2.27
GCN1-203ENST00000547369 NEURL4Q96JN8 1562 aa29.23■■■□□ 2.27
GCN1-203ENST00000547369 THEMISQ8N1K5 641 aaPredicted RBP29.23■■■□□ 2.27
GCN1-203ENST00000547369 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.22■■■□□ 2.27
GCN1-203ENST00000547369 UGGT1Q9NYU2 1555 aa29.22■■■□□ 2.27
GCN1-203ENST00000547369 CROCC2H7BZ55 1655 aa29.21■■■□□ 2.27
GCN1-203ENST00000547369 ABCC5O15440 1437 aa29.21■■■□□ 2.27
GCN1-203ENST00000547369 SHANK2Q9UPX8 1470 aa29.21■■■□□ 2.27
GCN1-203ENST00000547369 ANKLE2Q86XL3 938 aa29.2■■■□□ 2.26
GCN1-203ENST00000547369 SPATA31D1Q6ZQQ2 1576 aa29.2■■■□□ 2.26
GCN1-203ENST00000547369 KIF15Q9NS87 1388 aa29.19■■■□□ 2.26
GCN1-203ENST00000547369 CEP152O94986 1710 aa29.19■■■□□ 2.26
GCN1-203ENST00000547369 ERVK-7P63135 1459 aa29.17■■■□□ 2.26
GCN1-203ENST00000547369 FGD6Q6ZV73 1430 aa29.16■■■□□ 2.26
GCN1-203ENST00000547369 DAPK1P53355 1430 aa29.15■■■□□ 2.26
GCN1-203ENST00000547369 UBAP1LF5GYI3 381 aa29.15■■■□□ 2.26
GCN1-203ENST00000547369 RRP7BPQ9NSQ0 103 aa29.15■■■□□ 2.26
GCN1-203ENST00000547369 CFAP65Q6ZU64 1925 aaKnown RBP29.14■■■□□ 2.26
GCN1-203ENST00000547369 ERBINQ96RT1 1412 aa29.14■■■□□ 2.26
GCN1-203ENST00000547369 DEPDC5O75140 1603 aa29.12■■■□□ 2.25
GCN1-203ENST00000547369 MED14O60244 1454 aa29.11■■■□□ 2.25
GCN1-203ENST00000547369 PRDM15P57071 1507 aaPredicted RBP29.11■■■□□ 2.25
GCN1-203ENST00000547369 DISP3Q9P2K9 1392 aa29.1■■■□□ 2.25
GCN1-203ENST00000547369 NPHP4O75161 1426 aaPredicted RBP29.1■■■□□ 2.25
GCN1-203ENST00000547369 CPS1P31327 1500 aa29.1■■■□□ 2.25
GCN1-203ENST00000547369 ARHGAP31Q2M1Z3 1444 aa29.06■■■□□ 2.24
GCN1-203ENST00000547369 VWDEQ8N2E2 1590 aa29.05■■■□□ 2.24
GCN1-203ENST00000547369 IQGAP1P46940 1657 aa29.05■■■□□ 2.24
GCN1-203ENST00000547369 ANKRD30AQ9BXX3 1397 aa29.04■■■□□ 2.24
GCN1-203ENST00000547369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.04■■■□□ 2.248e-10■■■□□ 17.4
GCN1-203ENST00000547369 CHIC2Q9UKJ5 165 aa29.04■■■□□ 2.24
GCN1-203ENST00000547369 UBR1Q8IWV7 1749 aa29.03■■■□□ 2.24
GCN1-203ENST00000547369 KANK1Q14678 1352 aa29.01■■■□□ 2.23
GCN1-203ENST00000547369 TOM1O60784 492 aa28.95■■■□□ 2.22
GCN1-203ENST00000547369 SCAF11Q99590 1463 aaKnown RBP28.94■■■□□ 2.22
GCN1-203ENST00000547369 ILDR2Q71H61 639 aa28.94■■■□□ 2.22
GCN1-203ENST00000547369 LMTK2Q8IWU2 1503 aa28.94■■■□□ 2.22
GCN1-203ENST00000547369 ADGRL2O95490 1459 aa28.93■■■□□ 2.22
GCN1-203ENST00000547369 ARHGAP23Q9P227 1491 aa28.93■■■□□ 2.22
GCN1-203ENST00000547369 FAM50AQ14320 339 aaKnown RBP28.93■■■□□ 2.22
GCN1-203ENST00000547369 SLIT1O75093 1534 aa28.93■■■□□ 2.22
GCN1-203ENST00000547369 SCAF1Q9H7N4 1312 aaKnown RBP28.92■■■□□ 2.22
GCN1-203ENST00000547369 STRCP1A6NGW2 1772 aa28.91■■■□□ 2.22
GCN1-203ENST00000547369 PIP4K2BP78356 416 aa28.91■■■□□ 2.22
GCN1-203ENST00000547369 PIK3C2BO00750 1634 aa28.91■■■□□ 2.22
GCN1-203ENST00000547369 LTKP29376 864 aa28.9■■■□□ 2.22
GCN1-203ENST00000547369 TXNDC2Q86VQ3 553 aa28.9■■■□□ 2.22
GCN1-203ENST00000547369 STAG3Q9UJ98 1225 aa28.86■■■□□ 2.21
GCN1-203ENST00000547369 EID1Q9Y6B2 187 aa28.86■■■□□ 2.21
GCN1-203ENST00000547369 LRRC7Q96NW7 1537 aa28.85■■■□□ 2.21
GCN1-203ENST00000547369 SYNMO15061 1565 aa28.84■■■□□ 2.21
GCN1-203ENST00000547369 HSPA1LP34931 641 aa28.84■■■□□ 2.21
GCN1-203ENST00000547369 TMEM2Q9UHN6 1383 aa28.84■■■□□ 2.21
GCN1-203ENST00000547369 EFCAB6Q5THR3 1501 aa28.84■■■□□ 2.21
GCN1-203ENST00000547369 IDI1Q13907 227 aa28.83■■■□□ 2.21
GCN1-203ENST00000547369 ANKRD50Q9ULJ7 1429 aa28.83■■■□□ 2.21
GCN1-203ENST00000547369 KDM5AP29375 1690 aaKnown RBP28.83■■■□□ 2.21
GCN1-203ENST00000547369 ALKQ9UM73 1620 aa28.82■■■□□ 2.2
GCN1-203ENST00000547369 NOS1P29475 1434 aa28.81■■■□□ 2.2
GCN1-203ENST00000547369 SOCS7O14512 581 aa28.75■■■□□ 2.19
GCN1-203ENST00000547369 RPRD2Q5VT52 1461 aaKnown RBP28.74■■■□□ 2.19
GCN1-203ENST00000547369 SLC52A1Q9NWF4 448 aa28.74■■■□□ 2.19
GCN1-203ENST00000547369 ADGRB3O60242 1522 aa28.73■■■□□ 2.19
GCN1-203ENST00000547369 TET3O43151 1660 aa28.71■■■□□ 2.19
GCN1-203ENST00000547369 XIRP1Q702N8 1843 aaKnown RBP28.68■■■□□ 2.18
GCN1-203ENST00000547369 UNC13BO14795 1591 aa28.67■■■□□ 2.18
GCN1-203ENST00000547369 ROCK1Q13464 1354 aa28.67■■■□□ 2.18
GCN1-203ENST00000547369 GCC2Q8IWJ2 1684 aa28.66■■■□□ 2.18
GCN1-203ENST00000547369 MED1Q15648 1581 aaPredicted RBP28.66■■■□□ 2.18
GCN1-203ENST00000547369 SLC26A8Q96RN1 970 aa28.64■■■□□ 2.18
GCN1-203ENST00000547369 KCNA6P17658 529 aa28.62■■■□□ 2.17
GCN1-203ENST00000547369 MYO5BQ9ULV0 1848 aa28.62■■■□□ 2.17
GCN1-203ENST00000547369 SENP3Q9H4L4 574 aaPredicted RBP28.6■■■□□ 2.17
GCN1-203ENST00000547369 BCANQ96GW7 911 aa28.58■■■□□ 2.17
GCN1-203ENST00000547369 TMEM94Q12767 1356 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms