RNA–Protein interactions for RNA: ENST00000547352.1

HECTD4-204, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HECTD4, Length 1,203 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-204ENST00000547352 RGS17Q9UGC6 210 aaPredicted RBP13.7□□□□□ -0.22
HECTD4-204ENST00000547352 LRRIQ1Q96JM4 1722 aa13.7□□□□□ -0.22
HECTD4-204ENST00000547352 ATP1B4Q9UN42 357 aaPredicted RBP13.69□□□□□ -0.22
HECTD4-204ENST00000547352 CEP170BQ9Y4F5 1589 aaPredicted RBP13.69□□□□□ -0.22
HECTD4-204ENST00000547352 ABCC1P33527 1531 aa13.69□□□□□ -0.22
HECTD4-204ENST00000547352 ITSN2Q9NZM3 1697 aa13.69□□□□□ -0.22
HECTD4-204ENST00000547352 TROQ12816 1431 aaPredicted RBP13.68□□□□□ -0.22
HECTD4-204ENST00000547352 PTPRKQ15262 1439 aa13.68□□□□□ -0.22
HECTD4-204ENST00000547352 CLTCQ00610 1675 aaKnown RBP13.68□□□□□ -0.22
HECTD4-204ENST00000547352 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
HECTD4-204ENST00000547352 TOM1O60784 492 aa13.66□□□□□ -0.22
HECTD4-204ENST00000547352 UBTFP17480 764 aaKnown RBP13.66□□□□□ -0.22
HECTD4-204ENST00000547352 NEURL4Q96JN8 1562 aa13.65□□□□□ -0.22
HECTD4-204ENST00000547352 PREX2Q70Z35 1606 aa13.64□□□□□ -0.23
HECTD4-204ENST00000547352 SRCAPQ6ZRS2 3230 aa13.64□□□□□ -0.23
HECTD4-204ENST00000547352 DNMT1P26358 1616 aaKnown RBP13.64□□□□□ -0.23
HECTD4-204ENST00000547352 SAMD9LQ8IVG5 1584 aa13.63□□□□□ -0.23
HECTD4-204ENST00000547352 SHANK2Q9UPX8 1470 aa13.63□□□□□ -0.23
HECTD4-204ENST00000547352 CDK11AQ9UQ88 783 aaPredicted RBP13.63□□□□□ -0.23
HECTD4-204ENST00000547352 CPS1P31327 1500 aa13.62□□□□□ -0.23
HECTD4-204ENST00000547352 POLR1AO95602 1720 aaPredicted RBP13.6□□□□□ -0.23
HECTD4-204ENST00000547352 CEP162Q5TB80 1403 aa13.6□□□□□ -0.23
HECTD4-204ENST00000547352 CDC42BPAQ5VT25 1732 aa13.6□□□□□ -0.23
HECTD4-204ENST00000547352 VWDEQ8N2E2 1590 aa13.6□□□□□ -0.23
HECTD4-204ENST00000547352 ARHGAP35Q9NRY4 1499 aa13.6□□□□□ -0.23
HECTD4-204ENST00000547352 PLXNC1O60486 1568 aa13.59□□□□□ -0.23
HECTD4-204ENST00000547352 FMN1Q68DA7 1419 aa13.59□□□□□ -0.23
HECTD4-204ENST00000547352 A2ML1A8K2U0 1454 aa13.59□□□□□ -0.23
HECTD4-204ENST00000547352 STRCP1A6NGW2 1772 aa13.58□□□□□ -0.23
HECTD4-204ENST00000547352 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
HECTD4-204ENST00000547352 CLIP1P30622 1438 aa13.57□□□□□ -0.24
HECTD4-204ENST00000547352 HNRNPMP52272 730 aaKnown RBP eCLIP13.57□□□□□ -0.24
HECTD4-204ENST00000547352 GGT6Q6P531 493 aa13.57□□□□□ -0.24
HECTD4-204ENST00000547352 POTEAQ6S8J7 498 aa13.56□□□□□ -0.24
HECTD4-204ENST00000547352 SYCP2Q9BX26 1530 aa13.55□□□□□ -0.24
HECTD4-204ENST00000547352 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
HECTD4-204ENST00000547352 FBXO31Q5XUX0 539 aaPredicted RBP13.55□□□□□ -0.24
HECTD4-204ENST00000547352 SPAG9O60271 1321 aaKnown RBP13.55□□□□□ -0.24
HECTD4-204ENST00000547352 REM2Q8IYK8 340 aaPredicted RBP13.54□□□□□ -0.24
HECTD4-204ENST00000547352 A2MP01023 1474 aa13.54□□□□□ -0.24
HECTD4-204ENST00000547352 ATP7AQ04656 1500 aa13.54□□□□□ -0.24
HECTD4-204ENST00000547352 TRIM26Q12899 539 aaPredicted RBP13.53□□□□□ -0.24
HECTD4-204ENST00000547352 ZNF777Q9ULD5 760 aaPredicted RBP13.53□□□□□ -0.24
HECTD4-204ENST00000547352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.53□□□□□ -0.24
HECTD4-204ENST00000547352 INO80Q9ULG1 1556 aaPredicted RBP13.53□□□□□ -0.24
HECTD4-204ENST00000547352 PCGF6Q9BYE7 350 aa13.52□□□□□ -0.25
HECTD4-204ENST00000547352 LRRC7Q96NW7 1537 aa13.52□□□□□ -0.25
HECTD4-204ENST00000547352 SPDYE2BA6NHP3 402 aa13.51□□□□□ -0.25
HECTD4-204ENST00000547352 SPDYE6P0CI01 402 aa13.51□□□□□ -0.25
HECTD4-204ENST00000547352 SPDYE2Q495Y8 402 aa13.51□□□□□ -0.25
HECTD4-204ENST00000547352 GPATCH8Q9UKJ3 1502 aaKnown RBP13.49□□□□□ -0.25
HECTD4-204ENST00000547352 MED14O60244 1454 aa13.49□□□□□ -0.25
HECTD4-204ENST00000547352 ANKLE2Q86XL3 938 aa13.49□□□□□ -0.25
HECTD4-204ENST00000547352 NPHP4O75161 1426 aaPredicted RBP13.48□□□□□ -0.25
HECTD4-204ENST00000547352 TNRQ92752 1358 aa13.48□□□□□ -0.25
HECTD4-204ENST00000547352 SETD1AO15047 1707 aaKnown RBP13.48□□□□□ -0.25
HECTD4-204ENST00000547352 DEPDC5O75140 1603 aa13.46□□□□□ -0.25
HECTD4-204ENST00000547352 RNF17Q9BXT8 1623 aaKnown RBP13.46□□□□□ -0.25
HECTD4-204ENST00000547352 IQGAP1P46940 1657 aa13.46□□□□□ -0.26
HECTD4-204ENST00000547352 XIRP1Q702N8 1843 aaKnown RBP13.46□□□□□ -0.26
HECTD4-204ENST00000547352 ADGBQ8N7X0 1667 aa13.45□□□□□ -0.26
HECTD4-204ENST00000547352 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
HECTD4-204ENST00000547352 PZPP20742 1482 aa13.44□□□□□ -0.26
HECTD4-204ENST00000547352 UGGT1Q9NYU2 1555 aa13.44□□□□□ -0.26
HECTD4-204ENST00000547352 THEMISQ8N1K5 641 aaPredicted RBP13.43□□□□□ -0.26
HECTD4-204ENST00000547352 CASKIN1Q8WXD9 1431 aa13.43□□□□□ -0.26
HECTD4-204ENST00000547352 ZNF644Q9H582 1327 aaPredicted RBP13.42□□□□□ -0.26
HECTD4-204ENST00000547352 MIA2Q96PC5 1412 aa13.42□□□□□ -0.26
HECTD4-204ENST00000547352 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
HECTD4-204ENST00000547352 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
HECTD4-204ENST00000547352 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
HECTD4-204ENST00000547352 SYNMO15061 1565 aa13.41□□□□□ -0.26
HECTD4-204ENST00000547352 DHX29Q7Z478 1369 aaKnown RBP13.4□□□□□ -0.26
HECTD4-204ENST00000547352 KIF3BO15066 747 aa13.39□□□□□ -0.27
HECTD4-204ENST00000547352 CFDP1Q9UEE9 299 aaPredicted RBP13.39□□□□□ -0.27
HECTD4-204ENST00000547352 NLRP1Q9C000 1473 aa13.39□□□□□ -0.27
HECTD4-204ENST00000547352 MBD5Q9P267 1494 aa13.39□□□□□ -0.27
HECTD4-204ENST00000547352 FAM135AQ9P2D6 1515 aa13.39□□□□□ -0.27
HECTD4-204ENST00000547352 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
HECTD4-204ENST00000547352 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
HECTD4-204ENST00000547352 VPS8Q8N3P4 1428 aa13.38□□□□□ -0.27
HECTD4-204ENST00000547352 PLEKHH2Q8IVE3 1493 aa13.37□□□□□ -0.27
HECTD4-204ENST00000547352 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.27
HECTD4-204ENST00000547352 FAM135BQ49AJ0 1406 aa13.36□□□□□ -0.27
HECTD4-204ENST00000547352 WASHC2CQ9Y4E1 1318 aa13.36□□□□□ -0.27
HECTD4-204ENST00000547352 RTEL1-TNFRSF6BF6WH68 1400 aa13.34□□□□□ -0.27
HECTD4-204ENST00000547352 LTKP29376 864 aa13.34□□□□□ -0.27
HECTD4-204ENST00000547352 PPARGC1BQ86YN6 1023 aaKnown RBP13.34□□□□□ -0.27
HECTD4-204ENST00000547352 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
HECTD4-204ENST00000547352 ROBO1Q9Y6N7 1651 aa13.33□□□□□ -0.28
HECTD4-204ENST00000547352 CCNB3Q8WWL7 1395 aa13.32□□□□□ -0.28
HECTD4-204ENST00000547352 FYCO1Q9BQS8 1478 aa13.31□□□□□ -0.28
HECTD4-204ENST00000547352 UBR1Q8IWV7 1749 aa13.31□□□□□ -0.28
HECTD4-204ENST00000547352 CFAP65Q6ZU64 1925 aaKnown RBP13.31□□□□□ -0.28
HECTD4-204ENST00000547352 NCOA2Q15596 1464 aa13.3□□□□□ -0.28
HECTD4-204ENST00000547352 RBM33Q96EV2 1170 aaKnown RBP13.3□□□□□ -0.28
HECTD4-204ENST00000547352 TIAM1Q13009 1591 aa13.29□□□□□ -0.28
HECTD4-204ENST00000547352 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
HECTD4-204ENST00000547352 SCAF11Q99590 1463 aaKnown RBP13.29□□□□□ -0.28
HECTD4-204ENST00000547352 ARHGAP23Q9P227 1491 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms