RNA–Protein interactions for RNA: ENST00000546656.1

KRT18-203, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 521 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-203ENST00000546656 PTPRTO14522 1441 aa21.98■■□□□ 1.11
KRT18-203ENST00000546656 CEP170BQ9Y4F5 1589 aaPredicted RBP21.98■■□□□ 1.11
KRT18-203ENST00000546656 ZNF142P52746 1687 aaPredicted RBP21.97■■□□□ 1.11
KRT18-203ENST00000546656 FBXO31Q5XUX0 539 aaPredicted RBP21.96■■□□□ 1.11
KRT18-203ENST00000546656 WASHC2CQ9Y4E1 1318 aa21.96■■□□□ 1.11
KRT18-203ENST00000546656 NCKAP5LQ9HCH0 1330 aa21.95■■□□□ 1.1
KRT18-203ENST00000546656 FAM135AQ9P2D6 1515 aa21.93■■□□□ 1.1
KRT18-203ENST00000546656 PTPN23Q9H3S7 1636 aa21.92■■□□□ 1.1
KRT18-203ENST00000546656 PZPP20742 1482 aa21.92■■□□□ 1.1
KRT18-203ENST00000546656 RNF17Q9BXT8 1623 aaKnown RBP21.91■■□□□ 1.1
KRT18-203ENST00000546656 TNRQ92752 1358 aa21.9■■□□□ 1.1
KRT18-203ENST00000546656 A2ML1A8K2U0 1454 aa21.9■■□□□ 1.1
KRT18-203ENST00000546656 ABCC5O15440 1437 aa21.89■■□□□ 1.1
KRT18-203ENST00000546656 PLA2R1Q13018 1463 aa21.89■■□□□ 1.09
KRT18-203ENST00000546656 FGD6Q6ZV73 1430 aa21.89■■□□□ 1.09
KRT18-203ENST00000546656 CROCC2H7BZ55 1655 aa21.88■■□□□ 1.09
KRT18-203ENST00000546656 DNMT1P26358 1616 aaKnown RBP21.88■■□□□ 1.09
KRT18-203ENST00000546656 EIF2AK4Q9P2K8 1649 aaKnown RBP21.88■■□□□ 1.09
KRT18-203ENST00000546656 ABCC3O15438 1527 aa21.87■■□□□ 1.09
KRT18-203ENST00000546656 TCOF1Q13428 1488 aaKnown RBP21.87■■□□□ 1.09
KRT18-203ENST00000546656 DUOX2Q9NRD8 1548 aa21.86■■□□□ 1.09
KRT18-203ENST00000546656 SHANK2Q9UPX8 1470 aa21.86■■□□□ 1.09
KRT18-203ENST00000546656 LTBP4Q8N2S1 1624 aa21.86■■□□□ 1.09
KRT18-203ENST00000546656 MROH1Q8NDA8 1641 aa21.86■■□□□ 1.09
KRT18-203ENST00000546656 DAPK1P53355 1430 aa21.85■■□□□ 1.09
KRT18-203ENST00000546656 KIF15Q9NS87 1388 aa21.85■■□□□ 1.09
KRT18-203ENST00000546656 PKD2Q13563 968 aa21.84■■□□□ 1.09
KRT18-203ENST00000546656 RRP7BPQ9NSQ0 103 aa21.84■■□□□ 1.09
KRT18-203ENST00000546656 ZC3H13Q5T200 1668 aaKnown RBP21.82■■□□□ 1.08
KRT18-203ENST00000546656 ZNF335Q9H4Z2 1342 aaPredicted RBP21.81■■□□□ 1.08
KRT18-203ENST00000546656 CHIC2Q9UKJ5 165 aa21.8■■□□□ 1.08
KRT18-203ENST00000546656 CEP152O94986 1710 aa21.8■■□□□ 1.08
KRT18-203ENST00000546656 ERBINQ96RT1 1412 aa21.79■■□□□ 1.08
KRT18-203ENST00000546656 NLRP1Q9C000 1473 aa21.78■■□□□ 1.08
KRT18-203ENST00000546656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.77■■□□□ 1.08
KRT18-203ENST00000546656 SPATA31D1Q6ZQQ2 1576 aa21.77■■□□□ 1.08
KRT18-203ENST00000546656 UGGT1Q9NYU2 1555 aa21.76■■□□□ 1.07
KRT18-203ENST00000546656 ERVK-7P63135 1459 aa21.76■■□□□ 1.07
KRT18-203ENST00000546656 PRDM15P57071 1507 aaPredicted RBP21.75■■□□□ 1.07
KRT18-203ENST00000546656 NEURL4Q96JN8 1562 aa21.75■■□□□ 1.07
KRT18-203ENST00000546656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.75■■□□□ 1.071e-7■■□□□ 12.6
KRT18-203ENST00000546656 POLR1AO95602 1720 aaPredicted RBP21.75■■□□□ 1.07
KRT18-203ENST00000546656 FAM50AQ14320 339 aaKnown RBP21.74■■□□□ 1.07
KRT18-203ENST00000546656 ANKRD30AQ9BXX3 1397 aa21.74■■□□□ 1.07
KRT18-203ENST00000546656 THEMISQ8N1K5 641 aaPredicted RBP21.73■■□□□ 1.07
KRT18-203ENST00000546656 IQSEC2Q5JU85 1478 aa21.71■■□□□ 1.07
KRT18-203ENST00000546656 DEPDC5O75140 1603 aa21.71■■□□□ 1.07
KRT18-203ENST00000546656 ANKLE2Q86XL3 938 aa21.7■■□□□ 1.06
KRT18-203ENST00000546656 ARHGAP31Q2M1Z3 1444 aa21.67■■□□□ 1.06
KRT18-203ENST00000546656 ADGRL2O95490 1459 aa21.66■■□□□ 1.06
KRT18-203ENST00000546656 KANK1Q14678 1352 aa21.66■■□□□ 1.06
KRT18-203ENST00000546656 CFAP65Q6ZU64 1925 aaKnown RBP21.66■■□□□ 1.06
KRT18-203ENST00000546656 NPHP4O75161 1426 aaPredicted RBP21.65■■□□□ 1.06
KRT18-203ENST00000546656 MED14O60244 1454 aa21.63■■□□□ 1.05
KRT18-203ENST00000546656 UBR1Q8IWV7 1749 aa21.63■■□□□ 1.05
KRT18-203ENST00000546656 VWDEQ8N2E2 1590 aa21.62■■□□□ 1.05
KRT18-203ENST00000546656 PPARGC1BQ86YN6 1023 aaKnown RBP21.62■■□□□ 1.05
KRT18-203ENST00000546656 LMTK2Q8IWU2 1503 aa21.61■■□□□ 1.05
KRT18-203ENST00000546656 UBAP1LF5GYI3 381 aa21.61■■□□□ 1.05
KRT18-203ENST00000546656 IQGAP1P46940 1657 aa21.6■■□□□ 1.05
KRT18-203ENST00000546656 ANKRD50Q9ULJ7 1429 aa21.59■■□□□ 1.05
KRT18-203ENST00000546656 CPS1P31327 1500 aa21.58■■□□□ 1.04
KRT18-203ENST00000546656 PIK3C2BO00750 1634 aa21.57■■□□□ 1.04
KRT18-203ENST00000546656 EFCAB6Q5THR3 1501 aa21.56■■□□□ 1.04
KRT18-203ENST00000546656 SCAF11Q99590 1463 aaKnown RBP21.55■■□□□ 1.04
KRT18-203ENST00000546656 SYNMO15061 1565 aa21.54■■□□□ 1.04
KRT18-203ENST00000546656 ARHGAP23Q9P227 1491 aa21.54■■□□□ 1.04
KRT18-203ENST00000546656 LTKP29376 864 aa21.54■■□□□ 1.04
KRT18-203ENST00000546656 SLIT1O75093 1534 aa21.54■■□□□ 1.04
KRT18-203ENST00000546656 TXNDC2Q86VQ3 553 aa21.53■■□□□ 1.04
KRT18-203ENST00000546656 IDI1Q13907 227 aa21.52■■□□□ 1.04
KRT18-203ENST00000546656 STAG3Q9UJ98 1225 aa21.52■■□□□ 1.04
KRT18-203ENST00000546656 ITGAEP38570 1179 aa21.51■■□□□ 1.03
KRT18-203ENST00000546656 NOS1P29475 1434 aa21.51■■□□□ 1.03
KRT18-203ENST00000546656 TMEM2Q9UHN6 1383 aa21.49■■□□□ 1.03
KRT18-203ENST00000546656 STRCP1A6NGW2 1772 aa21.49■■□□□ 1.03
KRT18-203ENST00000546656 EID1Q9Y6B2 187 aa21.49■■□□□ 1.03
KRT18-203ENST00000546656 ROCK1Q13464 1354 aa21.48■■□□□ 1.03
KRT18-203ENST00000546656 SCAF1Q9H7N4 1312 aaKnown RBP21.48■■□□□ 1.03
KRT18-203ENST00000546656 UNC13BO14795 1591 aa21.48■■□□□ 1.03
KRT18-203ENST00000546656 PIP4K2BP78356 416 aa21.47■■□□□ 1.03
KRT18-203ENST00000546656 DISP3Q9P2K9 1392 aa21.47■■□□□ 1.03
KRT18-203ENST00000546656 TET3O43151 1660 aa21.46■■□□□ 1.03
KRT18-203ENST00000546656 RPRD2Q5VT52 1461 aaKnown RBP21.45■■□□□ 1.03
KRT18-203ENST00000546656 LRRC7Q96NW7 1537 aa21.45■■□□□ 1.02
KRT18-203ENST00000546656 KDM5AP29375 1690 aaKnown RBP21.45■■□□□ 1.02
KRT18-203ENST00000546656 ADGRB3O60242 1522 aa21.45■■□□□ 1.02
KRT18-203ENST00000546656 TOM1O60784 492 aa21.44■■□□□ 1.02
KRT18-203ENST00000546656 SLC52A1Q9NWF4 448 aa21.42■■□□□ 1.02
KRT18-203ENST00000546656 GCC2Q8IWJ2 1684 aa21.41■■□□□ 1.02
KRT18-203ENST00000546656 ALKQ9UM73 1620 aa21.41■■□□□ 1.02
KRT18-203ENST00000546656 E9PCH4 1651 aa21.38■■□□□ 1.01
KRT18-203ENST00000546656 IQGAP3Q86VI3 1631 aa21.38■■□□□ 1.01
KRT18-203ENST00000546656 HSPA1LP34931 641 aa21.38■■□□□ 1.01
KRT18-203ENST00000546656 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
KRT18-203ENST00000546656 NUP155O75694 1391 aa21.37■■□□□ 1.01
KRT18-203ENST00000546656 SLC26A8Q96RN1 970 aa21.37■■□□□ 1.01
KRT18-203ENST00000546656 ILDR2Q71H61 639 aa21.34■■□□□ 1.01
KRT18-203ENST00000546656 TMEM131LA2VDJ0 1609 aa21.33■■□□□ 1.01
KRT18-203ENST00000546656 ZFYVE9O95405 1425 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms