RNA–Protein interactions for RNA: ENST00000546519.1

SLC38A1-203, Transcript of solute carrier family 38 member 1, humanhuman

TSL 3

Gene SLC38A1, Length 309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-203ENST00000546519 PLEKHH2Q8IVE3 1493 aa34.12■■■■□ 3.05
SLC38A1-203ENST00000546519 PTPRKQ15262 1439 aa34.12■■■■□ 3.05
SLC38A1-203ENST00000546519 CAMSAP2Q08AD1 1489 aa34.09■■■■□ 3.05
SLC38A1-203ENST00000546519 ADGBQ8N7X0 1667 aa34.09■■■■□ 3.05
SLC38A1-203ENST00000546519 TRIM26Q12899 539 aaPredicted RBP34.08■■■■□ 3.05
SLC38A1-203ENST00000546519 PLA2R1Q13018 1463 aa34.06■■■■□ 3.04
SLC38A1-203ENST00000546519 ZNF644Q9H582 1327 aaPredicted RBP34.05■■■■□ 3.04
SLC38A1-203ENST00000546519 UBAP1LF5GYI3 381 aa34.02■■■■□ 3.04
SLC38A1-203ENST00000546519 PKD2Q13563 968 aa34.01■■■■□ 3.03
SLC38A1-203ENST00000546519 FAM50AQ14320 339 aaKnown RBP34■■■■□ 3.03
SLC38A1-203ENST00000546519 ARHGEF5Q12774 1597 aa33.97■■■■□ 3.03
SLC38A1-203ENST00000546519 MBD5Q9P267 1494 aa33.96■■■■□ 3.03
SLC38A1-203ENST00000546519 DNMT1P26358 1616 aaKnown RBP33.96■■■■□ 3.03
SLC38A1-203ENST00000546519 PPP6R1Q9UPN7 881 aa33.93■■■■□ 3.02
SLC38A1-203ENST00000546519 A2ML1A8K2U0 1454 aa33.93■■■■□ 3.02
SLC38A1-203ENST00000546519 RSPH4AQ5TD94 716 aa33.91■■■■□ 3.02
SLC38A1-203ENST00000546519 POLR1AO95602 1720 aaPredicted RBP33.88■■■■□ 3.01
SLC38A1-203ENST00000546519 CCDC141Q6ZP82 1450 aa33.87■■■■□ 3.01
SLC38A1-203ENST00000546519 RTEL1-TNFRSF6BF6WH68 1400 aa33.87■■■■□ 3.01
SLC38A1-203ENST00000546519 DAPK1P53355 1430 aa33.87■■■■□ 3.01
SLC38A1-203ENST00000546519 FBXO31Q5XUX0 539 aaPredicted RBP33.86■■■■□ 3.01
SLC38A1-203ENST00000546519 CROCC2H7BZ55 1655 aa33.86■■■■□ 3.01
SLC38A1-203ENST00000546519 DHX29Q7Z478 1369 aaKnown RBP33.85■■■■□ 3.01
SLC38A1-203ENST00000546519 NEURL4Q96JN8 1562 aa33.85■■■■□ 3.01
SLC38A1-203ENST00000546519 ABCC5O15440 1437 aa33.85■■■■□ 3.01
SLC38A1-203ENST00000546519 SHANK2Q9UPX8 1470 aa33.84■■■■□ 3.01
SLC38A1-203ENST00000546519 KIF3BO15066 747 aa33.81■■■■□ 3
SLC38A1-203ENST00000546519 TNRQ92752 1358 aa33.81■■■■□ 3
SLC38A1-203ENST00000546519 KDM5DQ9BY66 1539 aa33.79■■■■□ 3
SLC38A1-203ENST00000546519 MAST1Q9Y2H9 1570 aa33.77■■■■□ 3
SLC38A1-203ENST00000546519 SCAF1Q9H7N4 1312 aaKnown RBP33.77■■■■□ 3
SLC38A1-203ENST00000546519 PZPP20742 1482 aa33.76■■■■□ 3
SLC38A1-203ENST00000546519 PIP4K2BP78356 416 aa33.74■■■□□ 2.99
SLC38A1-203ENST00000546519 TSPY4P0CV99 314 aa33.72■■■□□ 2.99
SLC38A1-203ENST00000546519 TSPY10P0CW01 314 aa33.72■■■□□ 2.99
SLC38A1-203ENST00000546519 HSPA1LP34931 641 aa33.72■■■□□ 2.99
SLC38A1-203ENST00000546519 CPS1P31327 1500 aa33.71■■■□□ 2.99
SLC38A1-203ENST00000546519 ITGAEP38570 1179 aa33.71■■■□□ 2.99
SLC38A1-203ENST00000546519 ADGRL2O95490 1459 aa33.7■■■□□ 2.99
SLC38A1-203ENST00000546519 ROCK1Q13464 1354 aa33.7■■■□□ 2.98
SLC38A1-203ENST00000546519 WASHC2CQ9Y4E1 1318 aa33.69■■■□□ 2.98
SLC38A1-203ENST00000546519 PCGF6Q9BYE7 350 aa33.68■■■□□ 2.98
SLC38A1-203ENST00000546519 FAM135AQ9P2D6 1515 aa33.68■■■□□ 2.98
SLC38A1-203ENST00000546519 MED1Q15648 1581 aaPredicted RBP33.68■■■□□ 2.98
SLC38A1-203ENST00000546519 VWDEQ8N2E2 1590 aa33.68■■■□□ 2.98
SLC38A1-203ENST00000546519 UGGT1Q9NYU2 1555 aa33.64■■■□□ 2.98
SLC38A1-203ENST00000546519 ANKLE2Q86XL3 938 aa33.63■■■□□ 2.97
SLC38A1-203ENST00000546519 TOM1O60784 492 aa33.62■■■□□ 2.97
SLC38A1-203ENST00000546519 ANKRD30AQ9BXX3 1397 aa33.61■■■□□ 2.97
SLC38A1-203ENST00000546519 NLRP1Q9C000 1473 aa33.61■■■□□ 2.97
SLC38A1-203ENST00000546519 NPHP4O75161 1426 aaPredicted RBP33.6■■■□□ 2.97
SLC38A1-203ENST00000546519 ALKQ9UM73 1620 aa33.6■■■□□ 2.97
SLC38A1-203ENST00000546519 THEMISQ8N1K5 641 aaPredicted RBP33.59■■■□□ 2.97
SLC38A1-203ENST00000546519 CHIC2Q9UKJ5 165 aa33.59■■■□□ 2.97
SLC38A1-203ENST00000546519 DEPDC5O75140 1603 aa33.59■■■□□ 2.97
SLC38A1-203ENST00000546519 HFM1A2PYH4 1435 aa33.58■■■□□ 2.97
SLC38A1-203ENST00000546519 GCC2Q8IWJ2 1684 aa33.57■■■□□ 2.96
SLC38A1-203ENST00000546519 MED14O60244 1454 aa33.56■■■□□ 2.96
SLC38A1-203ENST00000546519 IQGAP1P46940 1657 aa33.56■■■□□ 2.96
SLC38A1-203ENST00000546519 STRCP1A6NGW2 1772 aa33.56■■■□□ 2.96
SLC38A1-203ENST00000546519 RNF17Q9BXT8 1623 aaKnown RBP33.54■■■□□ 2.96
SLC38A1-203ENST00000546519 ABCC3O15438 1527 aa33.53■■■□□ 2.96
SLC38A1-203ENST00000546519 NAIPQ13075 1403 aa33.52■■■□□ 2.96
SLC38A1-203ENST00000546519 KIF15Q9NS87 1388 aa33.49■■■□□ 2.95
SLC38A1-203ENST00000546519 ZC3H13Q5T200 1668 aaKnown RBP33.49■■■□□ 2.95
SLC38A1-203ENST00000546519 SENP3Q9H4L4 574 aaPredicted RBP33.48■■■□□ 2.95
SLC38A1-203ENST00000546519 CEP152O94986 1710 aa33.48■■■□□ 2.95
SLC38A1-203ENST00000546519 SETD5Q9C0A6 1442 aa33.47■■■□□ 2.95
SLC38A1-203ENST00000546519 RRP7BPQ9NSQ0 103 aa33.47■■■□□ 2.95
SLC38A1-203ENST00000546519 DUOX2Q9NRD8 1548 aa33.47■■■□□ 2.95
SLC38A1-203ENST00000546519 MROH1Q8NDA8 1641 aa33.46■■■□□ 2.95
SLC38A1-203ENST00000546519 ERVK-7P63135 1459 aa33.45■■■□□ 2.95
SLC38A1-203ENST00000546519 CFAP65Q6ZU64 1925 aaKnown RBP33.45■■■□□ 2.95
SLC38A1-203ENST00000546519 LRRC7Q96NW7 1537 aa33.43■■■□□ 2.94
SLC38A1-203ENST00000546519 EIF2AK4Q9P2K8 1649 aaKnown RBP33.43■■■□□ 2.94
SLC38A1-203ENST00000546519 UBR1Q8IWV7 1749 aa33.41■■■□□ 2.94
SLC38A1-203ENST00000546519 ANKRD50Q9ULJ7 1429 aa33.4■■■□□ 2.94
SLC38A1-203ENST00000546519 ERBINQ96RT1 1412 aa33.39■■■□□ 2.94
SLC38A1-203ENST00000546519 SYNMO15061 1565 aa33.38■■■□□ 2.93
SLC38A1-203ENST00000546519 HRCP23327 699 aa33.37■■■□□ 2.93
SLC38A1-203ENST00000546519 PHF23Q9BUL5 403 aaPredicted RBP33.36■■■□□ 2.93
SLC38A1-203ENST00000546519 RAB3GAP2Q9H2M9 1393 aa33.35■■■□□ 2.93
SLC38A1-203ENST00000546519 ACIN1Q9UKV3 1341 aaKnown RBP33.35■■■□□ 2.93
SLC38A1-203ENST00000546519 SCAF11Q99590 1463 aaKnown RBP33.29■■■□□ 2.92
SLC38A1-203ENST00000546519 XIRP1Q702N8 1843 aaKnown RBP33.28■■■□□ 2.92
SLC38A1-203ENST00000546519 LTKP29376 864 aa33.26■■■□□ 2.91
SLC38A1-203ENST00000546519 ARHGAP23Q9P227 1491 aa33.24■■■□□ 2.91
SLC38A1-203ENST00000546519 SLIT1O75093 1534 aa33.23■■■□□ 2.91
SLC38A1-203ENST00000546519 PRDM15P57071 1507 aaPredicted RBP33.22■■■□□ 2.91
SLC38A1-203ENST00000546519 UNC13BO14795 1591 aa33.21■■■□□ 2.91
SLC38A1-203ENST00000546519 TXNDC2Q86VQ3 553 aa33.21■■■□□ 2.91
SLC38A1-203ENST00000546519 PIK3C2BO00750 1634 aa33.2■■■□□ 2.91
SLC38A1-203ENST00000546519 ARHGAP31Q2M1Z3 1444 aa33.16■■■□□ 2.9
SLC38A1-203ENST00000546519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.14■■■□□ 2.9
SLC38A1-203ENST00000546519 RGS17Q9UGC6 210 aaPredicted RBP33.1■■■□□ 2.89
SLC38A1-203ENST00000546519 EID1Q9Y6B2 187 aa33.09■■■□□ 2.89
SLC38A1-203ENST00000546519 TMEM2Q9UHN6 1383 aa33.08■■■□□ 2.89
SLC38A1-203ENST00000546519 IQGAP3Q86VI3 1631 aa33.07■■■□□ 2.88
SLC38A1-203ENST00000546519 TRIM52Q96A61 297 aa33.05■■■□□ 2.88
SLC38A1-203ENST00000546519 NUP155O75694 1391 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms