RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 CAMSAP2Q08AD1 1489 aa26.91■■□□□ 1.9
CPSF7-225ENST00000545934 NCOA2Q15596 1464 aa26.91■■□□□ 1.9
CPSF7-225ENST00000545934 KDM5DQ9BY66 1539 aa26.9■■□□□ 1.9
CPSF7-225ENST00000545934 NEURL4Q96JN8 1562 aa26.89■■□□□ 1.9
CPSF7-225ENST00000545934 ARHGEF5Q12774 1597 aa26.88■■□□□ 1.89
CPSF7-225ENST00000545934 PZPP20742 1482 aa26.87■■□□□ 1.89
CPSF7-225ENST00000545934 SOCS7O14512 581 aa26.84■■□□□ 1.89
CPSF7-225ENST00000545934 RSPH4AQ5TD94 716 aa26.82■■□□□ 1.88
CPSF7-225ENST00000545934 TNRQ92752 1358 aa26.82■■□□□ 1.88
CPSF7-225ENST00000545934 RNF17Q9BXT8 1623 aaKnown RBP26.81■■□□□ 1.88
CPSF7-225ENST00000545934 KIF3BO15066 747 aa26.8■■□□□ 1.88
CPSF7-225ENST00000545934 MAST1Q9Y2H9 1570 aa26.79■■□□□ 1.88
CPSF7-225ENST00000545934 ZC3H13Q5T200 1668 aaKnown RBP26.79■■□□□ 1.88
CPSF7-225ENST00000545934 UBAP1LF5GYI3 381 aa26.78■■□□□ 1.88
CPSF7-225ENST00000545934 FBXO31Q5XUX0 539 aaPredicted RBP26.78■■□□□ 1.88
CPSF7-225ENST00000545934 DEPDC5O75140 1603 aa26.77■■□□□ 1.88
CPSF7-225ENST00000545934 CPS1P31327 1500 aa26.76■■□□□ 1.87
CPSF7-225ENST00000545934 EIF2AK4Q9P2K8 1649 aaKnown RBP26.75■■□□□ 1.87
CPSF7-225ENST00000545934 VWDEQ8N2E2 1590 aa26.74■■□□□ 1.87
CPSF7-225ENST00000545934 NLRP1Q9C000 1473 aa26.74■■□□□ 1.87
CPSF7-225ENST00000545934 SHANK2Q9UPX8 1470 aa26.73■■□□□ 1.87
CPSF7-225ENST00000545934 MIA2Q96PC5 1412 aa26.73■■□□□ 1.87
CPSF7-225ENST00000545934 WASHC2CQ9Y4E1 1318 aa26.72■■□□□ 1.87
CPSF7-225ENST00000545934 LRRC9Q6ZRR7 1453 aa26.72■■□□□ 1.87
CPSF7-225ENST00000545934 UGGT1Q9NYU2 1555 aa26.71■■□□□ 1.87
CPSF7-225ENST00000545934 MED14O60244 1454 aa26.71■■□□□ 1.87
CPSF7-225ENST00000545934 MROH1Q8NDA8 1641 aa26.7■■□□□ 1.86
CPSF7-225ENST00000545934 ABCC3O15438 1527 aa26.7■■□□□ 1.86
CPSF7-225ENST00000545934 IQGAP1P46940 1657 aa26.69■■□□□ 1.86
CPSF7-225ENST00000545934 CEP152O94986 1710 aa26.68■■□□□ 1.86
CPSF7-225ENST00000545934 VPS8Q8N3P4 1428 aa26.67■■□□□ 1.86
CPSF7-225ENST00000545934 STRCP1A6NGW2 1772 aa26.67■■□□□ 1.86
CPSF7-225ENST00000545934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.67■■□□□ 1.861e-11■■□□□ 12.1
CPSF7-225ENST00000545934 MAP3K1Q13233 1512 aa26.65■■□□□ 1.86
CPSF7-225ENST00000545934 TSPY4P0CV99 314 aa26.65■■□□□ 1.86
CPSF7-225ENST00000545934 TSPY10P0CW01 314 aa26.65■■□□□ 1.86
CPSF7-225ENST00000545934 CFAP65Q6ZU64 1925 aaKnown RBP26.65■■□□□ 1.86
CPSF7-225ENST00000545934 ALKQ9UM73 1620 aa26.65■■□□□ 1.86
CPSF7-225ENST00000545934 THEMISQ8N1K5 641 aaPredicted RBP26.64■■□□□ 1.86
CPSF7-225ENST00000545934 UBR1Q8IWV7 1749 aa26.63■■□□□ 1.85
CPSF7-225ENST00000545934 ANKLE2Q86XL3 938 aa26.63■■□□□ 1.85
CPSF7-225ENST00000545934 NPHP4O75161 1426 aaPredicted RBP26.63■■□□□ 1.85
CPSF7-225ENST00000545934 ERVK-7P63135 1459 aa26.6■■□□□ 1.85
CPSF7-225ENST00000545934 CROCC2H7BZ55 1655 aa26.6■■□□□ 1.85
CPSF7-225ENST00000545934 MED1Q15648 1581 aaPredicted RBP26.58■■□□□ 1.85
CPSF7-225ENST00000545934 SYNMO15061 1565 aa26.57■■□□□ 1.84
CPSF7-225ENST00000545934 MYOM3Q5VTT5 1437 aa26.56■■□□□ 1.84
CPSF7-225ENST00000545934 DUOX2Q9NRD8 1548 aa26.56■■□□□ 1.84
CPSF7-225ENST00000545934 TOM1O60784 492 aa26.56■■□□□ 1.84
CPSF7-225ENST00000545934 HSPA1LP34931 641 aa26.55■■□□□ 1.84
CPSF7-225ENST00000545934 KANK4Q5T7N3 995 aaPredicted RBP26.53■■□□□ 1.84
CPSF7-225ENST00000545934 PRDM15P57071 1507 aaPredicted RBP26.53■■□□□ 1.84
CPSF7-225ENST00000545934 PIP4K2BP78356 416 aa26.51■■□□□ 1.83
CPSF7-225ENST00000545934 LRRC7Q96NW7 1537 aa26.5■■□□□ 1.83
CPSF7-225ENST00000545934 XIRP1Q702N8 1843 aaKnown RBP26.49■■□□□ 1.83
CPSF7-225ENST00000545934 SCAF1Q9H7N4 1312 aaKnown RBP26.47■■□□□ 1.83
CPSF7-225ENST00000545934 SLIT1O75093 1534 aa26.47■■□□□ 1.83
CPSF7-225ENST00000545934 ARHGAP23Q9P227 1491 aa26.47■■□□□ 1.83
CPSF7-225ENST00000545934 ARHGAP31Q2M1Z3 1444 aa26.47■■□□□ 1.83
CPSF7-225ENST00000545934 PTPN23Q9H3S7 1636 aa26.46■■□□□ 1.83
CPSF7-225ENST00000545934 LOC105371045A0A1W2PR82 267 aa26.44■■□□□ 1.82
CPSF7-225ENST00000545934 ERBINQ96RT1 1412 aa26.44■■□□□ 1.82
CPSF7-225ENST00000545934 KDM5AP29375 1690 aaKnown RBP26.44■■□□□ 1.82
CPSF7-225ENST00000545934 PIK3C2BO00750 1634 aa26.43■■□□□ 1.82
CPSF7-225ENST00000545934 SCAF11Q99590 1463 aaKnown RBP26.43■■□□□ 1.82
CPSF7-225ENST00000545934 ABCC5O15440 1437 aa26.42■■□□□ 1.82
CPSF7-225ENST00000545934 KIF15Q9NS87 1388 aa26.41■■□□□ 1.82
CPSF7-225ENST00000545934 LMTK2Q8IWU2 1503 aa26.35■■□□□ 1.81
CPSF7-225ENST00000545934 LTKP29376 864 aa26.35■■□□□ 1.81
CPSF7-225ENST00000545934 DAPK1P53355 1430 aa26.35■■□□□ 1.81
CPSF7-225ENST00000545934 TXNDC2Q86VQ3 553 aa26.3■■□□□ 1.8
CPSF7-225ENST00000545934 RRP7BPQ9NSQ0 103 aa26.3■■□□□ 1.8
CPSF7-225ENST00000545934 FGD6Q6ZV73 1430 aa26.3■■□□□ 1.8
CPSF7-225ENST00000545934 TMEM2Q9UHN6 1383 aa26.28■■□□□ 1.8
CPSF7-225ENST00000545934 EFCAB6Q5THR3 1501 aa26.28■■□□□ 1.8
CPSF7-225ENST00000545934 TET3O43151 1660 aa26.27■■□□□ 1.8
CPSF7-225ENST00000545934 KANK1Q14678 1352 aa26.24■■□□□ 1.79
CPSF7-225ENST00000545934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.22■■□□□ 1.791e-8■■□□□ 12.8
CPSF7-225ENST00000545934 EID1Q9Y6B2 187 aa26.22■■□□□ 1.79
CPSF7-225ENST00000545934 MYO5BQ9ULV0 1848 aa26.22■■□□□ 1.79
CPSF7-225ENST00000545934 ADGRB3O60242 1522 aa26.22■■□□□ 1.79
CPSF7-225ENST00000545934 NOS1P29475 1434 aa26.22■■□□□ 1.79
CPSF7-225ENST00000545934 ANKRD30AQ9BXX3 1397 aa26.21■■□□□ 1.79
CPSF7-225ENST00000545934 ADGRL2O95490 1459 aa26.21■■□□□ 1.79
CPSF7-225ENST00000545934 NWD1Q149M9 1564 aa26.2■■□□□ 1.78
CPSF7-225ENST00000545934 IDI1Q13907 227 aa26.19■■□□□ 1.78
CPSF7-225ENST00000545934 PHF23Q9BUL5 403 aaPredicted RBP26.19■■□□□ 1.78
CPSF7-225ENST00000545934 FAM135BQ49AJ0 1406 aa26.16■■□□□ 1.78
CPSF7-225ENST00000545934 ROBO1Q9Y6N7 1651 aa26.15■■□□□ 1.78
CPSF7-225ENST00000545934 SENP3Q9H4L4 574 aaPredicted RBP26.15■■□□□ 1.78
CPSF7-225ENST00000545934 APLP2Q06481 763 aa26.14■■□□□ 1.78
CPSF7-225ENST00000545934 CHD2O14647 1828 aaKnown RBP26.14■■□□□ 1.77
CPSF7-225ENST00000545934 GCC2Q8IWJ2 1684 aa26.13■■□□□ 1.77
CPSF7-225ENST00000545934 CHIC2Q9UKJ5 165 aa26.13■■□□□ 1.77
CPSF7-225ENST00000545934 RPRD2Q5VT52 1461 aaKnown RBP26.12■■□□□ 1.77
CPSF7-225ENST00000545934 TMEM94Q12767 1356 aa26.12■■□□□ 1.77
CPSF7-225ENST00000545934 STAG3Q9UJ98 1225 aa26.12■■□□□ 1.77
CPSF7-225ENST00000545934 NKTRP30414 1462 aaKnown RBP26.11■■□□□ 1.77
CPSF7-225ENST00000545934 KCNA6P17658 529 aa26.11■■□□□ 1.77
CPSF7-225ENST00000545934 RGS17Q9UGC6 210 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms