RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 PLEKHH2Q8IVE3 1493 aa8.03□□□□□ -1.12
NPIPB3-214ENST00000545358 WDR7Q9Y4E6 1490 aa8.03□□□□□ -1.12
NPIPB3-214ENST00000545358 KLHL34Q8N239 644 aa8.03□□□□□ -1.12
NPIPB3-214ENST00000545358 FAM212AQ96EL1 285 aa8.02□□□□□ -1.13
NPIPB3-214ENST00000545358 ARHGAP5Q13017 1502 aa8.02□□□□□ -1.13
NPIPB3-214ENST00000545358 MAST1Q9Y2H9 1570 aa8.01□□□□□ -1.13
NPIPB3-214ENST00000545358 CCDC141Q6ZP82 1450 aa8.01□□□□□ -1.13
NPIPB3-214ENST00000545358 ABCA9Q8IUA7 1624 aa8.01□□□□□ -1.13
NPIPB3-214ENST00000545358 NUBP1P53384 320 aa8□□□□□ -1.13
NPIPB3-214ENST00000545358 TSPYL2Q9H2G4 693 aaPredicted RBP8□□□□□ -1.13
NPIPB3-214ENST00000545358 C9orf84Q5VXU9 1444 aa8□□□□□ -1.13
NPIPB3-214ENST00000545358 KIAA1107Q9UPP5 1409 aa8□□□□□ -1.13
NPIPB3-214ENST00000545358 MBD5Q9P267 1494 aa8□□□□□ -1.13
NPIPB3-214ENST00000545358 KDM6BO15054 1643 aa8□□□□□ -1.13
NPIPB3-214ENST00000545358 ANKRD30AQ9BXX3 1397 aa7.99□□□□□ -1.13
NPIPB3-214ENST00000545358 ABCC1P33527 1531 aa7.99□□□□□ -1.13
NPIPB3-214ENST00000545358 SYCP2Q9BX26 1530 aa7.99□□□□□ -1.13
NPIPB3-214ENST00000545358 PLXNC1O60486 1568 aa7.99□□□□□ -1.13
NPIPB3-214ENST00000545358 PLCH2O75038 1416 aa7.99□□□□□ -1.13
NPIPB3-214ENST00000545358 GABBR2O75899 941 aa7.99□□□□□ -1.13
NPIPB3-214ENST00000545358 NCOA1Q15788 1441 aa7.99□□□□□ -1.13
NPIPB3-214ENST00000545358 RASEFQ8IZ41 740 aa7.99□□□□□ -1.13
NPIPB3-214ENST00000545358 ZNF644Q9H582 1327 aaPredicted RBP7.99□□□□□ -1.13
NPIPB3-214ENST00000545358 ASXL2Q76L83 1435 aa7.97□□□□□ -1.13
NPIPB3-214ENST00000545358 RSPH4AQ5TD94 716 aa7.97□□□□□ -1.13
NPIPB3-214ENST00000545358 IFNLR1Q8IU57 520 aaPredicted RBP7.97□□□□□ -1.13
NPIPB3-214ENST00000545358 RRP7BPQ9NSQ0 103 aa7.97□□□□□ -1.13
NPIPB3-214ENST00000545358 CHIC2Q9UKJ5 165 aa7.97□□□□□ -1.13
NPIPB3-214ENST00000545358 CCDC61Q9Y6R9 512 aa7.97□□□□□ -1.13
NPIPB3-214ENST00000545358 KDM5DQ9BY66 1539 aa7.97□□□□□ -1.13
NPIPB3-214ENST00000545358 CFAP74Q9C0B2 1584 aa7.97□□□□□ -1.13
NPIPB3-214ENST00000545358 SPOCK2Q92563 424 aa7.96□□□□□ -1.14
NPIPB3-214ENST00000545358 ZNF777Q9ULD5 760 aaPredicted RBP7.96□□□□□ -1.14
NPIPB3-214ENST00000545358 GSE1Q14687 1217 aa7.95□□□□□ -1.14
NPIPB3-214ENST00000545358 TIMELESSQ9UNS1 1208 aa7.95□□□□□ -1.14
NPIPB3-214ENST00000545358 ANKRD50Q9ULJ7 1429 aa7.95□□□□□ -1.14
NPIPB3-214ENST00000545358 DENND4BO75064 1496 aaPredicted RBP7.94□□□□□ -1.14
NPIPB3-214ENST00000545358 RIMBP3CA6NJZ7 1639 aa7.94□□□□□ -1.14
NPIPB3-214ENST00000545358 RIMBP3BA6NNM3 1639 aa7.94□□□□□ -1.14
NPIPB3-214ENST00000545358 RIMBP3Q9UFD9 1639 aa7.94□□□□□ -1.14
NPIPB3-214ENST00000545358 KIF15Q9NS87 1388 aa7.94□□□□□ -1.14
NPIPB3-214ENST00000545358 UNC13BO14795 1591 aa7.93□□□□□ -1.14
NPIPB3-214ENST00000545358 TSPY4P0CV99 314 aa7.93□□□□□ -1.14
NPIPB3-214ENST00000545358 TSPY10P0CW01 314 aa7.93□□□□□ -1.14
NPIPB3-214ENST00000545358 PHF12Q96QT6 1004 aa7.93□□□□□ -1.14
NPIPB3-214ENST00000545358 FANCAO15360 1455 aa7.93□□□□□ -1.14
NPIPB3-214ENST00000545358 PZPP20742 1482 aa7.93□□□□□ -1.14
NPIPB3-214ENST00000545358 DUOX2Q9NRD8 1548 aa7.93□□□□□ -1.14
NPIPB3-214ENST00000545358 DCAF8Q5TAQ9 597 aa7.92□□□□□ -1.14
NPIPB3-214ENST00000545358 EFCAB2Q5VUJ9 269 aa7.92□□□□□ -1.14
NPIPB3-214ENST00000545358 SGIP1Q9BQI5 828 aa7.92□□□□□ -1.14
NPIPB3-214ENST00000545358 ERBINQ96RT1 1412 aa7.92□□□□□ -1.14
NPIPB3-214ENST00000545358 ZFYVE16Q7Z3T8 1539 aa7.92□□□□□ -1.14
NPIPB3-214ENST00000545358 ARHGEF12Q9NZN5 1544 aa7.92□□□□□ -1.14
NPIPB3-214ENST00000545358 INO80Q9ULG1 1556 aaPredicted RBP7.92□□□□□ -1.14
NPIPB3-214ENST00000545358 RTEL1-TNFRSF6BF6WH68 1400 aa7.91□□□□□ -1.14
NPIPB3-214ENST00000545358 MAGI2Q86UL8 1455 aa7.91□□□□□ -1.14
NPIPB3-214ENST00000545358 TONSLQ96HA7 1378 aa7.9□□□□□ -1.14
NPIPB3-214ENST00000545358 ZNF316A6NFI3 1004 aaPredicted RBP7.9□□□□□ -1.14
NPIPB3-214ENST00000545358 HNRNPMP52272 730 aaKnown RBP eCLIP7.9□□□□□ -1.14
NPIPB3-214ENST00000545358 TRIM52Q96A61 297 aa7.9□□□□□ -1.14
NPIPB3-214ENST00000545358 KIF12Q96FN5 646 aa7.9□□□□□ -1.14
NPIPB3-214ENST00000545358 KCNH8Q96L42 1107 aa7.9□□□□□ -1.14
NPIPB3-214ENST00000545358 GLI2P10070 1586 aa7.89□□□□□ -1.15
NPIPB3-214ENST00000545358 ATP7AQ04656 1500 aa7.89□□□□□ -1.15
NPIPB3-214ENST00000545358 ADGRL1O94910 1474 aa7.89□□□□□ -1.15
NPIPB3-214ENST00000545358 DCBLD2Q96PD2 775 aa7.89□□□□□ -1.15
NPIPB3-214ENST00000545358 MPHOSPH9Q99550 1183 aa7.89□□□□□ -1.15
NPIPB3-214ENST00000545358 IQGAP3Q86VI3 1631 aa7.89□□□□□ -1.15
NPIPB3-214ENST00000545358 EIF2AK4Q9P2K8 1649 aaKnown RBP7.89□□□□□ -1.15
NPIPB3-214ENST00000545358 RPRD2Q5VT52 1461 aaKnown RBP7.88□□□□□ -1.15
NPIPB3-214ENST00000545358 TRAPPC8Q9Y2L5 1435 aa7.88□□□□□ -1.15
NPIPB3-214ENST00000545358 ANKRD30BQ9BXX2 1392 aa7.88□□□□□ -1.15
NPIPB3-214ENST00000545358 MAP3K4Q9Y6R4 1608 aa7.88□□□□□ -1.15
NPIPB3-214ENST00000545358 KDM5CP41229 1560 aa7.88□□□□□ -1.15
NPIPB3-214ENST00000545358 FAM135AQ9P2D6 1515 aa7.88□□□□□ -1.15
NPIPB3-214ENST00000545358 ZNF518AQ6AHZ1 1483 aa7.87□□□□□ -1.15
NPIPB3-214ENST00000545358 NEO1Q92859 1461 aa7.87□□□□□ -1.15
NPIPB3-214ENST00000545358 GALR2O43603 387 aaPredicted RBP7.87□□□□□ -1.15
NPIPB3-214ENST00000545358 DEPDC5O75140 1603 aa7.87□□□□□ -1.15
NPIPB3-214ENST00000545358 TEX14Q8IWB6 1497 aa7.87□□□□□ -1.15
NPIPB3-214ENST00000545358 CD109Q6YHK3 1445 aa7.86□□□□□ -1.15
NPIPB3-214ENST00000545358 MS4A3Q96HJ5 214 aa7.86□□□□□ -1.15
NPIPB3-214ENST00000545358 SIN3AQ96ST3 1273 aa7.86□□□□□ -1.15
NPIPB3-214ENST00000545358 POGZQ7Z3K3 1410 aa7.86□□□□□ -1.15
NPIPB3-214ENST00000545358 NUP155O75694 1391 aa7.85□□□□□ -1.15
NPIPB3-214ENST00000545358 DIP2BQ9P265 1576 aa7.85□□□□□ -1.15
NPIPB3-214ENST00000545358 HECW2Q9P2P5 1572 aa7.85□□□□□ -1.15
NPIPB3-214ENST00000545358 SPAG9O60271 1321 aaKnown RBP7.85□□□□□ -1.15
NPIPB3-214ENST00000545358 MAP3K13O43283 966 aa7.85□□□□□ -1.15
NPIPB3-214ENST00000545358 NEUROD1Q13562 356 aa7.85□□□□□ -1.15
NPIPB3-214ENST00000545358 SCAPERQ9BY12 1400 aa7.85□□□□□ -1.15
NPIPB3-214ENST00000545358 CHRM1P11229 460 aaPredicted RBP7.84□□□□□ -1.15
NPIPB3-214ENST00000545358 PCDHB13Q9Y5F0 798 aa7.84□□□□□ -1.15
NPIPB3-214ENST00000545358 KIDINS220Q9ULH0 1771 aa7.84□□□□□ -1.15
NPIPB3-214ENST00000545358 BCORL1Q5H9F3 1711 aa7.83□□□□□ -1.16
NPIPB3-214ENST00000545358 PRDM15P57071 1507 aaPredicted RBP7.83□□□□□ -1.16
NPIPB3-214ENST00000545358 PPP1R15AO75807 674 aaPredicted RBP7.83□□□□□ -1.16
NPIPB3-214ENST00000545358 CIZ1Q9ULV3 898 aaPredicted RBP7.83□□□□□ -1.16
NPIPB3-214ENST00000545358 MLH3Q9UHC1 1453 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms