RNA–Protein interactions for RNA: ENST00000545061.5

SCN8A-203, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 11,433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-203ENST00000545061 KNSTRNQ9Y448 316 aa11.06□□□□□ -0.64
SCN8A-203ENST00000545061 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
SCN8A-203ENST00000545061 CCAR1Q8IX12 1150 aaKnown RBP11.05□□□□□ -0.64
SCN8A-203ENST00000545061 POLR3GO15318 223 aaPredicted RBP11.05□□□□□ -0.64
SCN8A-203ENST00000545061 CLGNO14967 610 aa11.05□□□□□ -0.64
SCN8A-203ENST00000545061 CCDC39Q9UFE4 941 aa11.05□□□□□ -0.64
SCN8A-203ENST00000545061 SLC26A8Q96RN1 970 aa11.04□□□□□ -0.64
SCN8A-203ENST00000545061 NUDCQ9Y266 331 aa11.04□□□□□ -0.64
SCN8A-203ENST00000545061 SF3A1Q15459 793 aaKnown RBP11.04□□□□□ -0.64
SCN8A-203ENST00000545061 NAT10Q9H0A0 1025 aaKnown RBP11.04□□□□□ -0.64
SCN8A-203ENST00000545061 AXDND1Q5T1B0 1012 aaPredicted RBP11.04□□□□□ -0.64
SCN8A-203ENST00000545061 SEPT7Q16181 437 aaKnown RBP11.04□□□□□ -0.64
SCN8A-203ENST00000545061 CALCOCO1Q9P1Z2 691 aa11.04□□□□□ -0.64
SCN8A-203ENST00000545061 SHTN1A0MZ66 631 aa11.03□□□□□ -0.64
SCN8A-203ENST00000545061 WDR66Q8TBY9 1149 aa11.03□□□□□ -0.64
SCN8A-203ENST00000545061 CCDC9Q9Y3X0 531 aaKnown RBP11.03□□□□□ -0.64
SCN8A-203ENST00000545061 IPO8O15397 1037 aaKnown RBP11.03□□□□□ -0.64
SCN8A-203ENST00000545061 RNF20Q5VTR2 975 aa11.03□□□□□ -0.64
SCN8A-203ENST00000545061 CHMP4AQ9BY43 222 aa11.03□□□□□ -0.64
SCN8A-203ENST00000545061 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.64
SCN8A-203ENST00000545061 IRX3P78415 501 aaPredicted RBP11.02□□□□□ -0.65
SCN8A-203ENST00000545061 TMX4Q9H1E5 349 aaPredicted RBP11.02□□□□□ -0.65
SCN8A-203ENST00000545061 ISY1Q9ULR0 285 aaKnown RBP11.02□□□□□ -0.65
SCN8A-203ENST00000545061 IQCEQ6IPM2 695 aa11.02□□□□□ -0.65
SCN8A-203ENST00000545061 PDCL2Q8N4E4 241 aa11.02□□□□□ -0.65
SCN8A-203ENST00000545061 GBP2P32456 591 aaPredicted RBP11.02□□□□□ -0.65
SCN8A-203ENST00000545061 CCDC47Q96A33 483 aaKnown RBP11.02□□□□□ -0.65
SCN8A-203ENST00000545061 IFT57Q9NWB7 429 aa11.02□□□□□ -0.65
SCN8A-203ENST00000545061 CT47A1Q5JQC4 288 aaPredicted RBP11.01□□□□□ -0.65
SCN8A-203ENST00000545061 ENOX2Q16206 610 aaKnown RBP11.01□□□□□ -0.65
SCN8A-203ENST00000545061 HDAC5Q9UQL6 1122 aa11.01□□□□□ -0.65
SCN8A-203ENST00000545061 LUZP1Q86V48 1076 aa11.01□□□□□ -0.65
SCN8A-203ENST00000545061 TXLNBQ8N3L3 684 aa11.01□□□□□ -0.65
SCN8A-203ENST00000545061 DDX49Q9Y6V7 483 aaKnown RBP11.01□□□□□ -0.65
SCN8A-203ENST00000545061 FRAT1Q92837 279 aaPredicted RBP11.01□□□□□ -0.65
SCN8A-203ENST00000545061 CEP63Q96MT8 703 aa11.01□□□□□ -0.65
SCN8A-203ENST00000545061 KIF3BO15066 747 aa11□□□□□ -0.65
SCN8A-203ENST00000545061 ERLIN1O75477 346 aa11□□□□□ -0.65
SCN8A-203ENST00000545061 B4GALNT3Q6L9W6 998 aa11□□□□□ -0.65
SCN8A-203ENST00000545061 SUDS3Q9H7L9 328 aaPredicted RBP11□□□□□ -0.65
SCN8A-203ENST00000545061 A0A0G2JS52 829 aa11□□□□□ -0.65
SCN8A-203ENST00000545061 RWDD1Q9H446 243 aaPredicted RBP11□□□□□ -0.65
SCN8A-203ENST00000545061 KIAA1328Q86T90 577 aa11□□□□□ -0.65
SCN8A-203ENST00000545061 CPSF2Q9P2I0 782 aaKnown RBP10.99□□□□□ -0.65
SCN8A-203ENST00000545061 STK31Q9BXU1 1019 aa10.99□□□□□ -0.65
SCN8A-203ENST00000545061 H3BQV1 296 aa10.99□□□□□ -0.65
SCN8A-203ENST00000545061 IFFO2Q5TF58 517 aa10.99□□□□□ -0.65
SCN8A-203ENST00000545061 HSP90AB2PQ58FF8 381 aa10.99□□□□□ -0.65
SCN8A-203ENST00000545061 STAMBPO95630 424 aa10.99□□□□□ -0.65
SCN8A-203ENST00000545061 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.99□□□□□ -0.65
SCN8A-203ENST00000545061 V9GYY5 206 aaPredicted RBP10.99□□□□□ -0.65
SCN8A-203ENST00000545061 DNAJC2Q99543 621 aaKnown RBP10.98□□□□□ -0.65
SCN8A-203ENST00000545061 PAF1Q8N7H5 531 aa10.98□□□□□ -0.65
SCN8A-203ENST00000545061 PCMTD1Q96MG8 357 aaPredicted RBP10.98□□□□□ -0.65
SCN8A-203ENST00000545061 DAAM2Q86T65 1068 aa10.97□□□□□ -0.65
SCN8A-203ENST00000545061 TTLL5Q6EMB2 1281 aa10.97□□□□□ -0.65
SCN8A-203ENST00000545061 CCDC146Q8IYE0 955 aa10.97□□□□□ -0.65
SCN8A-203ENST00000545061 CCDC91Q7Z6B0 441 aa10.96□□□□□ -0.65
SCN8A-203ENST00000545061 NAP1L1P55209 391 aaKnown RBP10.96□□□□□ -0.65
SCN8A-203ENST00000545061 MICALCLQ6ZW33 695 aa10.96□□□□□ -0.65
SCN8A-203ENST00000545061 KIF3CO14782 793 aa10.96□□□□□ -0.66
SCN8A-203ENST00000545061 SEPT14Q6ZU15 432 aa10.96□□□□□ -0.66
SCN8A-203ENST00000545061 RBM28Q9NW13 759 aaKnown RBP10.96□□□□□ -0.66
SCN8A-203ENST00000545061 GPATCH11Q8N954 259 aa10.95□□□□□ -0.66
SCN8A-203ENST00000545061 LUC7LQ9NQ29 371 aaKnown RBP10.95□□□□□ -0.66
SCN8A-203ENST00000545061 LETM1O95202 739 aaPredicted RBP10.95□□□□□ -0.66
SCN8A-203ENST00000545061 RBM33Q96EV2 1170 aaKnown RBP10.94□□□□□ -0.66
SCN8A-203ENST00000545061 DDX23Q9BUQ8 820 aaKnown RBP10.94□□□□□ -0.66
SCN8A-203ENST00000545061 CENPHQ9H3R5 247 aa10.94□□□□□ -0.66
SCN8A-203ENST00000545061 TCHPQ9BT92 498 aa10.94□□□□□ -0.66
SCN8A-203ENST00000545061 AEBP1Q8IUX7 1158 aa10.94□□□□□ -0.66
SCN8A-203ENST00000545061 CTR9Q6PD62 1173 aa10.93□□□□□ -0.66
SCN8A-203ENST00000545061 LRRCC1Q9C099 1032 aa10.93□□□□□ -0.66
SCN8A-203ENST00000545061 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
SCN8A-203ENST00000545061 MARCH6O60337 910 aa10.93□□□□□ -0.66
SCN8A-203ENST00000545061 SMARCE1Q969G3 411 aa10.93□□□□□ -0.66
SCN8A-203ENST00000545061 SASS6Q6UVJ0 657 aa10.93□□□□□ -0.66
SCN8A-203ENST00000545061 TCEAL9Q9UHQ7 104 aa10.93□□□□□ -0.66
SCN8A-203ENST00000545061 EPS15P42566 896 aa10.92□□□□□ -0.66
SCN8A-203ENST00000545061 SMC1AQ14683 1233 aaKnown RBP10.92□□□□□ -0.66
SCN8A-203ENST00000545061 NASPP49321 788 aaPredicted RBP10.92□□□□□ -0.66
SCN8A-203ENST00000545061 MRE11P49959 708 aa10.92□□□□□ -0.66
SCN8A-203ENST00000545061 MCM3P25205 808 aa10.92□□□□□ -0.66
SCN8A-203ENST00000545061 CCDC112Q8NEF3 446 aa10.91□□□□□ -0.66
SCN8A-203ENST00000545061 ANKRD18BA2A2Z9 1011 aa10.91□□□□□ -0.66
SCN8A-203ENST00000545061 GTF2A1P52655 376 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-203ENST00000545061 ANO8Q9HCE9 1232 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-203ENST00000545061 U2SURPO15042 1029 aaKnown RBP10.91□□□□□ -0.66
SCN8A-203ENST00000545061 FAM184AQ8NB25 1140 aa10.91□□□□□ -0.66
SCN8A-203ENST00000545061 R3HCC1Q9Y3T6 440 aaKnown RBP10.91□□□□□ -0.66
SCN8A-203ENST00000545061 TICAM2Q86XR7 235 aa10.91□□□□□ -0.66
SCN8A-203ENST00000545061 DZIP1Q86YF9 867 aaKnown RBP10.9□□□□□ -0.66
SCN8A-203ENST00000545061 KIF7Q2M1P5 1343 aa10.9□□□□□ -0.66
SCN8A-203ENST00000545061 GOLGA6L9A6NEM1 432 aa10.9□□□□□ -0.66
SCN8A-203ENST00000545061 UBE2Q2Q8WVN8 375 aa10.9□□□□□ -0.66
SCN8A-203ENST00000545061 LRRFIP1Q32MZ4 808 aaKnown RBP10.9□□□□□ -0.66
SCN8A-203ENST00000545061 FANCIQ9NVI1 1328 aa10.9□□□□□ -0.67
SCN8A-203ENST00000545061 AKAP17AQ02040 695 aaKnown RBP10.89□□□□□ -0.67
SCN8A-203ENST00000545061 DDX46Q7L014 1031 aaKnown RBP10.89□□□□□ -0.67
SCN8A-203ENST00000545061 ZWINTO95229 277 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms