RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 TEX14Q8IWB6 1497 aa16.48■□□□□ 0.23
TNC-213ENST00000544972 FRMPD1Q5SYB0 1578 aa16.47■□□□□ 0.23
TNC-213ENST00000544972 DEPDC5O75140 1603 aa16.47■□□□□ 0.23
TNC-213ENST00000544972 EIF2AK4Q9P2K8 1649 aaKnown RBP16.47■□□□□ 0.23
TNC-213ENST00000544972 ABCA6Q8N139 1617 aa16.46■□□□□ 0.22
TNC-213ENST00000544972 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.22
TNC-213ENST00000544972 RPRD2Q5VT52 1461 aaKnown RBP16.45■□□□□ 0.22
TNC-213ENST00000544972 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
TNC-213ENST00000544972 A2MP01023 1474 aa16.44■□□□□ 0.22
TNC-213ENST00000544972 PPP1R15AO75807 674 aaPredicted RBP16.43■□□□□ 0.22
TNC-213ENST00000544972 MROH1Q8NDA8 1641 aa16.42■□□□□ 0.22
TNC-213ENST00000544972 ZMYM4Q5VZL5 1548 aa16.42■□□□□ 0.22
TNC-213ENST00000544972 VWDEQ8N2E2 1590 aa16.42■□□□□ 0.22
TNC-213ENST00000544972 DIP2CQ9Y2E4 1556 aa16.42■□□□□ 0.22
TNC-213ENST00000544972 DNAJC5Q9H3Z4 198 aa16.42■□□□□ 0.22
TNC-213ENST00000544972 KIF3BO15066 747 aa16.41■□□□□ 0.22
TNC-213ENST00000544972 PRDM15P57071 1507 aaPredicted RBP16.4■□□□□ 0.22
TNC-213ENST00000544972 YEATS2Q9ULM3 1422 aa16.4■□□□□ 0.22
TNC-213ENST00000544972 BCORL1Q5H9F3 1711 aa16.39■□□□□ 0.21
TNC-213ENST00000544972 RNF17Q9BXT8 1623 aaKnown RBP16.38■□□□□ 0.21
TNC-213ENST00000544972 COL17A1Q9UMD9 1497 aaPredicted RBP16.38■□□□□ 0.21
TNC-213ENST00000544972 PLA2R1Q13018 1463 aa16.37■□□□□ 0.21
TNC-213ENST00000544972 ZNF316A6NFI3 1004 aaPredicted RBP16.36■□□□□ 0.21
TNC-213ENST00000544972 L3MBTL2Q969R5 705 aa16.36■□□□□ 0.21
TNC-213ENST00000544972 E9PCH4 1651 aa16.36■□□□□ 0.21
TNC-213ENST00000544972 TET3O43151 1660 aa16.35■□□□□ 0.21
TNC-213ENST00000544972 ATP10AO60312 1499 aa16.35■□□□□ 0.21
TNC-213ENST00000544972 KANK1Q14678 1352 aa16.34■□□□□ 0.21
TNC-213ENST00000544972 LMTK2Q8IWU2 1503 aa16.31■□□□□ 0.2
TNC-213ENST00000544972 CEP152O94986 1710 aa16.3■□□□□ 0.2
TNC-213ENST00000544972 CCDC144AA2RUR9 1427 aa16.3■□□□□ 0.2
TNC-213ENST00000544972 EFCAB6Q5THR3 1501 aa16.29■□□□□ 0.2
TNC-213ENST00000544972 REREQ9P2R6 1566 aa16.29■□□□□ 0.2
TNC-213ENST00000544972 GGT6Q6P531 493 aa16.29■□□□□ 0.2
TNC-213ENST00000544972 PTPRTO14522 1441 aa16.28■□□□□ 0.2
TNC-213ENST00000544972 SPHKAPQ2M3C7 1700 aa16.28■□□□□ 0.2
TNC-213ENST00000544972 TRPM2O94759 1503 aa16.27■□□□□ 0.19
TNC-213ENST00000544972 ABCC3O15438 1527 aa16.26■□□□□ 0.19
TNC-213ENST00000544972 NBPF8Q3BBV2 869 aa16.26■□□□□ 0.19
TNC-213ENST00000544972 SIGLEC1Q9BZZ2 1709 aa16.26■□□□□ 0.19
TNC-213ENST00000544972 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
TNC-213ENST00000544972 AGLP35573 1532 aa16.24■□□□□ 0.19
TNC-213ENST00000544972 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
TNC-213ENST00000544972 WASHC2CQ9Y4E1 1318 aa16.23■□□□□ 0.19
TNC-213ENST00000544972 CLTCL1P53675 1640 aa16.23■□□□□ 0.19
TNC-213ENST00000544972 NPATQ14207 1427 aa16.22■□□□□ 0.19
TNC-213ENST00000544972 CAMSAP1Q5T5Y3 1602 aa16.22■□□□□ 0.19
TNC-213ENST00000544972 ZC3H13Q5T200 1668 aaKnown RBP16.21■□□□□ 0.19
TNC-213ENST00000544972 UHRF1BP1Q6BDS2 1440 aa16.21■□□□□ 0.19
TNC-213ENST00000544972 SPATA31E1Q6ZUB1 1445 aa16.2■□□□□ 0.18
TNC-213ENST00000544972 DCAF11Q8TEB1 546 aa16.18■□□□□ 0.18
TNC-213ENST00000544972 UGGT1Q9NYU2 1555 aa16.18■□□□□ 0.18
TNC-213ENST00000544972 RGL3Q3MIN7 710 aa16.17■□□□□ 0.18
TNC-213ENST00000544972 DIEXFQ68CQ4 756 aaKnown RBP16.17■□□□□ 0.18
TNC-213ENST00000544972 CFAP65Q6ZU64 1925 aaKnown RBP16.17■□□□□ 0.18
TNC-213ENST00000544972 ARHGAP31Q2M1Z3 1444 aa16.17■□□□□ 0.18
TNC-213ENST00000544972 KDM2AQ9Y2K7 1162 aa16.15■□□□□ 0.18
TNC-213ENST00000544972 NEURL4Q96JN8 1562 aa16.15■□□□□ 0.18
TNC-213ENST00000544972 NOS1P29475 1434 aa16.15■□□□□ 0.18
TNC-213ENST00000544972 HIRIP3Q9BW71 556 aaPredicted RBP16.15■□□□□ 0.18
TNC-213ENST00000544972 CNTLNQ9NXG0 1405 aa16.14■□□□□ 0.17
TNC-213ENST00000544972 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
TNC-213ENST00000544972 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
TNC-213ENST00000544972 PRAG1Q86YV5 1406 aa16.13■□□□□ 0.17
TNC-213ENST00000544972 KIF1BO60333 1816 aa16.12■□□□□ 0.17
TNC-213ENST00000544972 RALGAPBQ86X10 1494 aa16.12■□□□□ 0.17
TNC-213ENST00000544972 SYNMO15061 1565 aa16.11■□□□□ 0.17
TNC-213ENST00000544972 HSPA5P11021 654 aaKnown RBP16.1■□□□□ 0.17
TNC-213ENST00000544972 CLTCQ00610 1675 aaKnown RBP16.1■□□□□ 0.17
TNC-213ENST00000544972 PIK3C2BO00750 1634 aa16.1■□□□□ 0.17
TNC-213ENST00000544972 MROH2AA6NES4 1674 aa16.1■□□□□ 0.17
TNC-213ENST00000544972 EIF4G2P78344 907 aaKnown RBP eCLIP16.1■□□□□ 0.17
TNC-213ENST00000544972 TRPM1Q7Z4N2 1603 aa16.09■□□□□ 0.17
TNC-213ENST00000544972 PREX1Q8TCU6 1659 aa16.09■□□□□ 0.17
TNC-213ENST00000544972 MLECQ14165 292 aa16.08■□□□□ 0.17
TNC-213ENST00000544972 ADGRB3O60242 1522 aa16.08■□□□□ 0.16
TNC-213ENST00000544972 MADDQ8WXG6 1647 aa16.06■□□□□ 0.16
TNC-213ENST00000544972 STAC3Q96MF2 364 aa16.05■□□□□ 0.16
TNC-213ENST00000544972 IFT172Q9UG01 1749 aa16.05■□□□□ 0.16
TNC-213ENST00000544972 ERVK-7P63135 1459 aa16.05■□□□□ 0.16
TNC-213ENST00000544972 FBXO31Q5XUX0 539 aaPredicted RBP16.04■□□□□ 0.16
TNC-213ENST00000544972 ARID4BQ4LE39 1312 aaPredicted RBP16.03■□□□□ 0.16
TNC-213ENST00000544972 ROCK2O75116 1388 aaKnown RBP16.03■□□□□ 0.16
TNC-213ENST00000544972 GPRASP1Q5JY77 1395 aa16.03■□□□□ 0.16
TNC-213ENST00000544972 USP47Q96K76 1375 aa16.03■□□□□ 0.16
TNC-213ENST00000544972 NBPF1Q3BBV0 1214 aa16.03■□□□□ 0.16
TNC-213ENST00000544972 CARD11Q9BXL7 1154 aa16.03■□□□□ 0.16
TNC-213ENST00000544972 MYOM2P54296 1465 aa16.02■□□□□ 0.16
TNC-213ENST00000544972 IDI1Q13907 227 aa16.02■□□□□ 0.16
TNC-213ENST00000544972 SLC52A1Q9NWF4 448 aa16.02■□□□□ 0.16
TNC-213ENST00000544972 SPATA31D1Q6ZQQ2 1576 aa16.02■□□□□ 0.15
TNC-213ENST00000544972 LAMC1P11047 1609 aa16.01■□□□□ 0.15
TNC-213ENST00000544972 PPLO60437 1756 aa16■□□□□ 0.15
TNC-213ENST00000544972 ZMYM3Q14202 1370 aa16■□□□□ 0.15
TNC-213ENST00000544972 CHGAP10645 457 aaKnown RBP16■□□□□ 0.15
TNC-213ENST00000544972 C11orf95C9JLR9 678 aaPredicted RBP15.99■□□□□ 0.15
TNC-213ENST00000544972 NRXN1Q9ULB1 1477 aa15.99■□□□□ 0.15
TNC-213ENST00000544972 WASHC2AQ641Q2 1341 aa15.99■□□□□ 0.15
TNC-213ENST00000544972 TMEM131LA2VDJ0 1609 aa15.98■□□□□ 0.15
TNC-213ENST00000544972 ADGRF5Q8IZF2 1346 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms