RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 EIF2AK4Q9P2K8 1649 aaKnown RBP10.38□□□□□ -0.75
HMGCS2-204ENST00000544913 VWDEQ8N2E2 1590 aa10.38□□□□□ -0.75
HMGCS2-204ENST00000544913 A2MP01023 1474 aa10.37□□□□□ -0.75
HMGCS2-204ENST00000544913 ARHGEF40Q8TER5 1519 aa10.37□□□□□ -0.75
HMGCS2-204ENST00000544913 REREQ9P2R6 1566 aa10.36□□□□□ -0.75
HMGCS2-204ENST00000544913 RNF17Q9BXT8 1623 aaKnown RBP10.36□□□□□ -0.75
HMGCS2-204ENST00000544913 IQGAP3Q86VI3 1631 aa10.36□□□□□ -0.75
HMGCS2-204ENST00000544913 PRDM15P57071 1507 aaPredicted RBP10.36□□□□□ -0.75
HMGCS2-204ENST00000544913 CCER1Q8TC90 406 aaPredicted RBP10.35□□□□□ -0.75
HMGCS2-204ENST00000544913 FAM135AQ9P2D6 1515 aa10.35□□□□□ -0.75
HMGCS2-204ENST00000544913 TRHP20396 242 aaPredicted RBP10.35□□□□□ -0.75
HMGCS2-204ENST00000544913 MPHOSPH9Q99550 1183 aa10.33□□□□□ -0.76
HMGCS2-204ENST00000544913 CLSPNQ9HAW4 1339 aa10.33□□□□□ -0.76
HMGCS2-204ENST00000544913 NUP155O75694 1391 aa10.32□□□□□ -0.76
HMGCS2-204ENST00000544913 ATP10AO60312 1499 aa10.32□□□□□ -0.76
HMGCS2-204ENST00000544913 AGLP35573 1532 aa10.32□□□□□ -0.76
HMGCS2-204ENST00000544913 ANKRD30BQ9BXX2 1392 aa10.31□□□□□ -0.76
HMGCS2-204ENST00000544913 TRIM52Q96A61 297 aa10.31□□□□□ -0.76
HMGCS2-204ENST00000544913 LMTK2Q8IWU2 1503 aa10.3□□□□□ -0.76
HMGCS2-204ENST00000544913 PLA2R1Q13018 1463 aa10.3□□□□□ -0.76
HMGCS2-204ENST00000544913 ACIN1Q9UKV3 1341 aaKnown RBP10.3□□□□□ -0.76
HMGCS2-204ENST00000544913 KIF3BO15066 747 aa10.29□□□□□ -0.76
HMGCS2-204ENST00000544913 FOXD1Q16676 465 aa10.29□□□□□ -0.76
HMGCS2-204ENST00000544913 TET3O43151 1660 aa10.29□□□□□ -0.76
HMGCS2-204ENST00000544913 ABCC3O15438 1527 aa10.28□□□□□ -0.76
HMGCS2-204ENST00000544913 E9PCH4 1651 aa10.28□□□□□ -0.76
HMGCS2-204ENST00000544913 SLC4A1APQ9BWU0 796 aaKnown RBP10.28□□□□□ -0.76
HMGCS2-204ENST00000544913 EFCAB6Q5THR3 1501 aa10.27□□□□□ -0.77
HMGCS2-204ENST00000544913 PKD2Q13563 968 aa10.27□□□□□ -0.77
HMGCS2-204ENST00000544913 SIN3AQ96ST3 1273 aa10.27□□□□□ -0.77
HMGCS2-204ENST00000544913 MYT1LQ9UL68 1186 aa10.27□□□□□ -0.77
HMGCS2-204ENST00000544913 CEP152O94986 1710 aa10.27□□□□□ -0.77
HMGCS2-204ENST00000544913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.25□□□□□ -0.77
HMGCS2-204ENST00000544913 PTPRTO14522 1441 aa10.25□□□□□ -0.77
HMGCS2-204ENST00000544913 RPRD2Q5VT52 1461 aaKnown RBP10.24□□□□□ -0.77
HMGCS2-204ENST00000544913 ZC3H13Q5T200 1668 aaKnown RBP10.23□□□□□ -0.77
HMGCS2-204ENST00000544913 NPATQ14207 1427 aa10.23□□□□□ -0.77
HMGCS2-204ENST00000544913 CAMSAP1Q5T5Y3 1602 aa10.23□□□□□ -0.77
HMGCS2-204ENST00000544913 TRPM2O94759 1503 aa10.22□□□□□ -0.77
HMGCS2-204ENST00000544913 ARHGAP31Q2M1Z3 1444 aa10.22□□□□□ -0.77
HMGCS2-204ENST00000544913 GGT6Q6P531 493 aa10.21□□□□□ -0.77
HMGCS2-204ENST00000544913 KANK1Q14678 1352 aa10.21□□□□□ -0.78
HMGCS2-204ENST00000544913 SPHKAPQ2M3C7 1700 aa10.21□□□□□ -0.78
HMGCS2-204ENST00000544913 CLTCL1P53675 1640 aa10.2□□□□□ -0.78
HMGCS2-204ENST00000544913 NOS1P29475 1434 aa10.19□□□□□ -0.78
HMGCS2-204ENST00000544913 UGGT1Q9NYU2 1555 aa10.19□□□□□ -0.78
HMGCS2-204ENST00000544913 SYNMO15061 1565 aa10.19□□□□□ -0.78
HMGCS2-204ENST00000544913 CLTCQ00610 1675 aaKnown RBP10.18□□□□□ -0.78
HMGCS2-204ENST00000544913 SPATA31E1Q6ZUB1 1445 aa10.18□□□□□ -0.78
HMGCS2-204ENST00000544913 NEUROD1Q13562 356 aa10.17□□□□□ -0.78
HMGCS2-204ENST00000544913 WASHC2CQ9Y4E1 1318 aa10.17□□□□□ -0.78
HMGCS2-204ENST00000544913 PIK3C2BO00750 1634 aa10.17□□□□□ -0.78
HMGCS2-204ENST00000544913 PPP6R1Q9UPN7 881 aa10.17□□□□□ -0.78
HMGCS2-204ENST00000544913 PREX1Q8TCU6 1659 aa10.16□□□□□ -0.78
HMGCS2-204ENST00000544913 TIMELESSQ9UNS1 1208 aa10.15□□□□□ -0.78
HMGCS2-204ENST00000544913 CCDC144AA2RUR9 1427 aa10.15□□□□□ -0.78
HMGCS2-204ENST00000544913 CNTLNQ9NXG0 1405 aa10.15□□□□□ -0.78
HMGCS2-204ENST00000544913 ERVK-7P63135 1459 aa10.15□□□□□ -0.78
HMGCS2-204ENST00000544913 NEURL4Q96JN8 1562 aa10.15□□□□□ -0.78
HMGCS2-204ENST00000544913 PELP1Q8IZL8 1130 aaKnown RBP10.15□□□□□ -0.79
HMGCS2-204ENST00000544913 SPATA31D1Q6ZQQ2 1576 aa10.14□□□□□ -0.79
HMGCS2-204ENST00000544913 MYT1Q01538 1121 aa10.14□□□□□ -0.79
HMGCS2-204ENST00000544913 L3MBTL2Q969R5 705 aa10.14□□□□□ -0.79
HMGCS2-204ENST00000544913 MROH2AA6NES4 1674 aa10.14□□□□□ -0.79
HMGCS2-204ENST00000544913 PPP1R15AO75807 674 aaPredicted RBP10.13□□□□□ -0.79
HMGCS2-204ENST00000544913 ADAMTSL3P82987 1691 aa10.13□□□□□ -0.79
HMGCS2-204ENST00000544913 CFAP65Q6ZU64 1925 aaKnown RBP10.13□□□□□ -0.79
HMGCS2-204ENST00000544913 ADGRB3O60242 1522 aa10.13□□□□□ -0.79
HMGCS2-204ENST00000544913 TONSLQ96HA7 1378 aa10.13□□□□□ -0.79
HMGCS2-204ENST00000544913 MLECQ14165 292 aa10.13□□□□□ -0.79
HMGCS2-204ENST00000544913 FER1L4A9Z1Z3 1794 aa10.11□□□□□ -0.79
HMGCS2-204ENST00000544913 FBXO31Q5XUX0 539 aaPredicted RBP10.11□□□□□ -0.79
HMGCS2-204ENST00000544913 PLPPR3Q6T4P5 718 aa10.11□□□□□ -0.79
HMGCS2-204ENST00000544913 MADDQ8WXG6 1647 aa10.11□□□□□ -0.79
HMGCS2-204ENST00000544913 ZMYM3Q14202 1370 aa10.11□□□□□ -0.79
HMGCS2-204ENST00000544913 ARID4BQ4LE39 1312 aaPredicted RBP10.1□□□□□ -0.79
HMGCS2-204ENST00000544913 C3P01024 1663 aa10.1□□□□□ -0.79
HMGCS2-204ENST00000544913 UHRF1BP1Q6BDS2 1440 aa10.1□□□□□ -0.79
HMGCS2-204ENST00000544913 IFT172Q9UG01 1749 aa10.09□□□□□ -0.79
HMGCS2-204ENST00000544913 NBPF8Q3BBV2 869 aa10.09□□□□□ -0.79
HMGCS2-204ENST00000544913 TMEM131LA2VDJ0 1609 aa10.09□□□□□ -0.79
HMGCS2-204ENST00000544913 KIF1BO60333 1816 aa10.07□□□□□ -0.8
HMGCS2-204ENST00000544913 PRAG1Q86YV5 1406 aa10.07□□□□□ -0.8
HMGCS2-204ENST00000544913 IDI1Q13907 227 aa10.07□□□□□ -0.8
HMGCS2-204ENST00000544913 NRXN1Q9ULB1 1477 aa10.07□□□□□ -0.8
HMGCS2-204ENST00000544913 MYO5BQ9ULV0 1848 aa10.06□□□□□ -0.8
HMGCS2-204ENST00000544913 RIMS1Q86UR5 1692 aaKnown RBP10.06□□□□□ -0.8
HMGCS2-204ENST00000544913 NEXMIFQ5QGS0 1516 aa10.06□□□□□ -0.8
HMGCS2-204ENST00000544913 MYOM2P54296 1465 aa10.05□□□□□ -0.8
HMGCS2-204ENST00000544913 PPLO60437 1756 aa10.05□□□□□ -0.8
HMGCS2-204ENST00000544913 A2ML1A8K2U0 1454 aa10.05□□□□□ -0.8
HMGCS2-204ENST00000544913 ZNF316A6NFI3 1004 aaPredicted RBP10.05□□□□□ -0.8
HMGCS2-204ENST00000544913 CEBPAP49715 358 aaPredicted RBP10.05□□□□□ -0.8
HMGCS2-204ENST00000544913 RALGAPBQ86X10 1494 aa10.04□□□□□ -0.8
HMGCS2-204ENST00000544913 TNRQ92752 1358 aa10.04□□□□□ -0.8
HMGCS2-204ENST00000544913 RGL3Q3MIN7 710 aa10.04□□□□□ -0.8
HMGCS2-204ENST00000544913 SLC52A1Q9NWF4 448 aa10.04□□□□□ -0.8
HMGCS2-204ENST00000544913 TRPM1Q7Z4N2 1603 aa10.04□□□□□ -0.8
HMGCS2-204ENST00000544913 DCAF11Q8TEB1 546 aa10.03□□□□□ -0.8
HMGCS2-204ENST00000544913 KDM5AP29375 1690 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms