RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 BCORL1Q5H9F3 1711 aa17.11■□□□□ 0.33
PAAF1-215ENST00000544909 PLCH2O75038 1416 aa17.1■□□□□ 0.33
PAAF1-215ENST00000544909 EIF2AK4Q9P2K8 1649 aaKnown RBP17.1■□□□□ 0.33
PAAF1-215ENST00000544909 CCDC144AA2RUR9 1427 aa17.1■□□□□ 0.33
PAAF1-215ENST00000544909 GPRASP1Q5JY77 1395 aa17.1■□□□□ 0.33
PAAF1-215ENST00000544909 HNRNPMP52272 730 aaKnown RBP eCLIP17.09■□□□□ 0.33
PAAF1-215ENST00000544909 TSHZ2Q9NRE2 1034 aa17.08■□□□□ 0.33
PAAF1-215ENST00000544909 MRS2Q9HD23 443 aa17.07■□□□□ 0.32
PAAF1-215ENST00000544909 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
PAAF1-215ENST00000544909 TRPM1Q7Z4N2 1603 aa17.06■□□□□ 0.32
PAAF1-215ENST00000544909 ABCC1P33527 1531 aa17.06■□□□□ 0.32
PAAF1-215ENST00000544909 RTEL1-TNFRSF6BF6WH68 1400 aa17.06■□□□□ 0.32
PAAF1-215ENST00000544909 E9PCH4 1651 aa17.05■□□□□ 0.32
PAAF1-215ENST00000544909 ZCCHC11Q5TAX3 1644 aaKnown RBP17.05■□□□□ 0.32
PAAF1-215ENST00000544909 CARD11Q9BXL7 1154 aa17.04■□□□□ 0.32
PAAF1-215ENST00000544909 STAC3Q96MF2 364 aa17.03■□□□□ 0.32
PAAF1-215ENST00000544909 PLA2R1Q13018 1463 aa17.01■□□□□ 0.31
PAAF1-215ENST00000544909 EFCAB2Q5VUJ9 269 aa17.01■□□□□ 0.31
PAAF1-215ENST00000544909 WDR7Q9Y4E6 1490 aa17.01■□□□□ 0.31
PAAF1-215ENST00000544909 PRDM15P57071 1507 aaPredicted RBP17■□□□□ 0.31
PAAF1-215ENST00000544909 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
PAAF1-215ENST00000544909 ERCC6L2Q5T890 1561 aa17■□□□□ 0.31
PAAF1-215ENST00000544909 NEURL4Q96JN8 1562 aa17■□□□□ 0.31
PAAF1-215ENST00000544909 ZMYM4Q5VZL5 1548 aa16.99■□□□□ 0.31
PAAF1-215ENST00000544909 RALBP1Q15311 655 aa16.99■□□□□ 0.31
PAAF1-215ENST00000544909 BRD4O60885 1362 aaPredicted RBP16.99■□□□□ 0.31
PAAF1-215ENST00000544909 INSRP06213 1382 aa16.99■□□□□ 0.31
PAAF1-215ENST00000544909 SMG6Q86US8 1419 aaKnown RBP16.98■□□□□ 0.31
PAAF1-215ENST00000544909 A2MP01023 1474 aa16.98■□□□□ 0.31
PAAF1-215ENST00000544909 DEPDC5O75140 1603 aa16.97■□□□□ 0.31
PAAF1-215ENST00000544909 RNF17Q9BXT8 1623 aaKnown RBP16.97■□□□□ 0.31
PAAF1-215ENST00000544909 CCDC184Q52MB2 194 aa16.96■□□□□ 0.31
PAAF1-215ENST00000544909 DCAF11Q8TEB1 546 aa16.96■□□□□ 0.31
PAAF1-215ENST00000544909 COL17A1Q9UMD9 1497 aaPredicted RBP16.95■□□□□ 0.3
PAAF1-215ENST00000544909 ZNF326Q5BKZ1 582 aaKnown RBP16.95■□□□□ 0.3
PAAF1-215ENST00000544909 ZFYVE16Q7Z3T8 1539 aa16.94■□□□□ 0.3
PAAF1-215ENST00000544909 LRPPRCP42704 1394 aaKnown RBP16.94■□□□□ 0.3
PAAF1-215ENST00000544909 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
PAAF1-215ENST00000544909 TRPM2O94759 1503 aa16.93■□□□□ 0.3
PAAF1-215ENST00000544909 ST20-MTHFSA0A0A6YYL1 179 aa16.93■□□□□ 0.3
PAAF1-215ENST00000544909 BCANQ96GW7 911 aa16.93■□□□□ 0.3
PAAF1-215ENST00000544909 MYBBP1AQ9BQG0 1328 aaKnown RBP16.93■□□□□ 0.3
PAAF1-215ENST00000544909 ABCA9Q8IUA7 1624 aa16.92■□□□□ 0.3
PAAF1-215ENST00000544909 PPP4R2Q9NY27 417 aa16.92■□□□□ 0.3
PAAF1-215ENST00000544909 PTPRTO14522 1441 aa16.91■□□□□ 0.3
PAAF1-215ENST00000544909 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
PAAF1-215ENST00000544909 RNF123Q5XPI4 1314 aa16.9■□□□□ 0.3
PAAF1-215ENST00000544909 PNISRQ8TF01 805 aaKnown RBP16.9■□□□□ 0.3
PAAF1-215ENST00000544909 VWDEQ8N2E2 1590 aa16.9■□□□□ 0.3
PAAF1-215ENST00000544909 PARD3Q8TEW0 1356 aa16.9■□□□□ 0.3
PAAF1-215ENST00000544909 TET3O43151 1660 aa16.89■□□□□ 0.29
PAAF1-215ENST00000544909 TRAPPC8Q9Y2L5 1435 aa16.88■□□□□ 0.29
PAAF1-215ENST00000544909 NUDCQ9Y266 331 aa16.87■□□□□ 0.29
PAAF1-215ENST00000544909 SCAPERQ9BY12 1400 aa16.87■□□□□ 0.29
PAAF1-215ENST00000544909 CEP152O94986 1710 aa16.86■□□□□ 0.29
PAAF1-215ENST00000544909 NLRP13Q86W25 1043 aa16.86■□□□□ 0.29
PAAF1-215ENST00000544909 TMC1Q8TDI8 760 aa16.86■□□□□ 0.29
PAAF1-215ENST00000544909 KDM2AQ9Y2K7 1162 aa16.86■□□□□ 0.29
PAAF1-215ENST00000544909 SPHKAPQ2M3C7 1700 aa16.85■□□□□ 0.29
PAAF1-215ENST00000544909 SPAG9O60271 1321 aaKnown RBP16.85■□□□□ 0.29
PAAF1-215ENST00000544909 ATP7AQ04656 1500 aa16.85■□□□□ 0.29
PAAF1-215ENST00000544909 MADDQ8WXG6 1647 aa16.85■□□□□ 0.29
PAAF1-215ENST00000544909 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
PAAF1-215ENST00000544909 SLC24A1O60721 1099 aa16.84■□□□□ 0.29
PAAF1-215ENST00000544909 TESK2Q96S53 571 aa16.83■□□□□ 0.28
PAAF1-215ENST00000544909 IQGAP1P46940 1657 aa16.83■□□□□ 0.28
PAAF1-215ENST00000544909 FANCAO15360 1455 aa16.82■□□□□ 0.28
PAAF1-215ENST00000544909 KANK1Q14678 1352 aa16.82■□□□□ 0.28
PAAF1-215ENST00000544909 PER1O15534 1290 aaPredicted RBP16.81■□□□□ 0.28
PAAF1-215ENST00000544909 TMF1P82094 1093 aa16.81■□□□□ 0.28
PAAF1-215ENST00000544909 PDE3BQ13370 1112 aa16.81■□□□□ 0.28
PAAF1-215ENST00000544909 RBM19Q9Y4C8 960 aaKnown RBP16.81■□□□□ 0.28
PAAF1-215ENST00000544909 CDCA8Q53HL2 280 aa16.8■□□□□ 0.28
PAAF1-215ENST00000544909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.28
PAAF1-215ENST00000544909 LMTK2Q8IWU2 1503 aa16.79■□□□□ 0.28
PAAF1-215ENST00000544909 MYOM2P54296 1465 aa16.78■□□□□ 0.28
PAAF1-215ENST00000544909 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
PAAF1-215ENST00000544909 CFAP74Q9C0B2 1584 aa16.78■□□□□ 0.28
PAAF1-215ENST00000544909 SCAF11Q99590 1463 aaKnown RBP16.78■□□□□ 0.28
PAAF1-215ENST00000544909 SYNMO15061 1565 aa16.77■□□□□ 0.28
PAAF1-215ENST00000544909 FANCIQ9NVI1 1328 aa16.77■□□□□ 0.28
PAAF1-215ENST00000544909 EIF3AQ14152 1382 aaKnown RBP16.77■□□□□ 0.27
PAAF1-215ENST00000544909 ADGRL1O94910 1474 aa16.76■□□□□ 0.27
PAAF1-215ENST00000544909 CLTCL1P53675 1640 aa16.76■□□□□ 0.27
PAAF1-215ENST00000544909 NBPF1Q3BBV0 1214 aa16.76■□□□□ 0.27
PAAF1-215ENST00000544909 RGL3Q3MIN7 710 aa16.75■□□□□ 0.27
PAAF1-215ENST00000544909 NPC1L1Q9UHC9 1359 aa16.75■□□□□ 0.27
PAAF1-215ENST00000544909 MROH1Q8NDA8 1641 aa16.75■□□□□ 0.27
PAAF1-215ENST00000544909 DISP3Q9P2K9 1392 aa16.75■□□□□ 0.27
PAAF1-215ENST00000544909 EFCAB6Q5THR3 1501 aa16.74■□□□□ 0.27
PAAF1-215ENST00000544909 ZNF518AQ6AHZ1 1483 aa16.74■□□□□ 0.27
PAAF1-215ENST00000544909 BLMP54132 1417 aaPredicted RBP16.74■□□□□ 0.27
PAAF1-215ENST00000544909 ANP32EQ9BTT0 268 aa16.71■□□□□ 0.27
PAAF1-215ENST00000544909 ASXL2Q76L83 1435 aa16.71■□□□□ 0.27
PAAF1-215ENST00000544909 AFAP1Q8N556 730 aa16.7■□□□□ 0.26
PAAF1-215ENST00000544909 SBNO2Q9Y2G9 1366 aa16.69■□□□□ 0.26
PAAF1-215ENST00000544909 NRXN1Q9ULB1 1477 aa16.69■□□□□ 0.26
PAAF1-215ENST00000544909 MAP3K4Q9Y6R4 1608 aa16.69■□□□□ 0.26
PAAF1-215ENST00000544909 IRX6P78412 446 aaPredicted RBP16.68■□□□□ 0.26
PAAF1-215ENST00000544909 KIDINS220Q9ULH0 1771 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms