RNA–Protein interactions for RNA: ENST00000544755.1

PDCD2-212, Transcript of programmed cell death 2, humanhuman

TSL 2

Gene PDCD2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-212ENST00000544755 KDM5DQ9BY66 1539 aa23.33■■□□□ 1.32
PDCD2-212ENST00000544755 NCOA1Q15788 1441 aa23.33■■□□□ 1.32
PDCD2-212ENST00000544755 RRBP1Q9P2E9 1410 aaKnown RBP23.33■■□□□ 1.32
PDCD2-212ENST00000544755 ZC3H13Q5T200 1668 aaKnown RBP23.32■■□□□ 1.32
PDCD2-212ENST00000544755 PREX1Q8TCU6 1659 aa23.31■■□□□ 1.32
PDCD2-212ENST00000544755 PPARGC1BQ86YN6 1023 aaKnown RBP23.3■■□□□ 1.32
PDCD2-212ENST00000544755 NPATQ14207 1427 aa23.3■■□□□ 1.32
PDCD2-212ENST00000544755 ROCK1Q13464 1354 aa23.29■■□□□ 1.32
PDCD2-212ENST00000544755 RRP7BPQ9NSQ0 103 aa23.28■■□□□ 1.32
PDCD2-212ENST00000544755 ZMYM3Q14202 1370 aa23.27■■□□□ 1.32
PDCD2-212ENST00000544755 DEPDC5O75140 1603 aa23.26■■□□□ 1.31
PDCD2-212ENST00000544755 PRDM15P57071 1507 aaPredicted RBP23.25■■□□□ 1.31
PDCD2-212ENST00000544755 CHIC2Q9UKJ5 165 aa23.25■■□□□ 1.31
PDCD2-212ENST00000544755 WASHC2CQ9Y4E1 1318 aa23.25■■□□□ 1.31
PDCD2-212ENST00000544755 LMTK3Q96Q04 1460 aa23.23■■□□□ 1.31
PDCD2-212ENST00000544755 PLPPR3Q6T4P5 718 aa23.22■■□□□ 1.31
PDCD2-212ENST00000544755 KANK1Q14678 1352 aa23.22■■□□□ 1.31
PDCD2-212ENST00000544755 UHRF1BP1Q6BDS2 1440 aa23.22■■□□□ 1.31
PDCD2-212ENST00000544755 MROH1Q8NDA8 1641 aa23.22■■□□□ 1.31
PDCD2-212ENST00000544755 CEBPAP49715 358 aaPredicted RBP23.21■■□□□ 1.31
PDCD2-212ENST00000544755 ANKRD50Q9ULJ7 1429 aa23.21■■□□□ 1.31
PDCD2-212ENST00000544755 ABCC3O15438 1527 aa23.2■■□□□ 1.3
PDCD2-212ENST00000544755 PZPP20742 1482 aa23.19■■□□□ 1.3
PDCD2-212ENST00000544755 PTPRKQ15262 1439 aa23.18■■□□□ 1.3
PDCD2-212ENST00000544755 CAMSAP1Q5T5Y3 1602 aa23.15■■□□□ 1.3
PDCD2-212ENST00000544755 CEP152O94986 1710 aa23.15■■□□□ 1.3
PDCD2-212ENST00000544755 LMTK2Q8IWU2 1503 aa23.13■■□□□ 1.29
PDCD2-212ENST00000544755 ZNF142P52746 1687 aaPredicted RBP23.13■■□□□ 1.29
PDCD2-212ENST00000544755 MYO3AQ8NEV4 1616 aa23.12■■□□□ 1.29
PDCD2-212ENST00000544755 ITGAEP38570 1179 aa23.12■■□□□ 1.29
PDCD2-212ENST00000544755 VWDEQ8N2E2 1590 aa23.12■■□□□ 1.29
PDCD2-212ENST00000544755 UNC13BO14795 1591 aa23.11■■□□□ 1.29
PDCD2-212ENST00000544755 ARHGAP31Q2M1Z3 1444 aa23.11■■□□□ 1.29
PDCD2-212ENST00000544755 GCC2Q8IWJ2 1684 aa23.08■■□□□ 1.29
PDCD2-212ENST00000544755 SPATA31D1Q6ZQQ2 1576 aa23.07■■□□□ 1.28
PDCD2-212ENST00000544755 TNRQ92752 1358 aa23.07■■□□□ 1.28
PDCD2-212ENST00000544755 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.07■■□□□ 1.28
PDCD2-212ENST00000544755 CEP170BQ9Y4F5 1589 aaPredicted RBP23.06■■□□□ 1.28
PDCD2-212ENST00000544755 NLRP1Q9C000 1473 aa23.06■■□□□ 1.28
PDCD2-212ENST00000544755 A2ML1A8K2U0 1454 aa23.04■■□□□ 1.28
PDCD2-212ENST00000544755 ERVK-7P63135 1459 aa23.04■■□□□ 1.28
PDCD2-212ENST00000544755 RPRD2Q5VT52 1461 aaKnown RBP23.04■■□□□ 1.28
PDCD2-212ENST00000544755 TET3O43151 1660 aa23.03■■□□□ 1.28
PDCD2-212ENST00000544755 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
PDCD2-212ENST00000544755 HFM1A2PYH4 1435 aa23.02■■□□□ 1.28
PDCD2-212ENST00000544755 IQGAP3Q86VI3 1631 aa23.02■■□□□ 1.28
PDCD2-212ENST00000544755 HSPA2P54652 639 aa23■■□□□ 1.27
PDCD2-212ENST00000544755 NAIPQ13075 1403 aa22.99■■□□□ 1.27
PDCD2-212ENST00000544755 FBXO31Q5XUX0 539 aaPredicted RBP22.99■■□□□ 1.27
PDCD2-212ENST00000544755 PLA2R1Q13018 1463 aa22.98■■□□□ 1.27
PDCD2-212ENST00000544755 DMRT2Q9Y5R5 561 aa22.98■■□□□ 1.27
PDCD2-212ENST00000544755 ACIN1Q9UKV3 1341 aaKnown RBP22.98■■□□□ 1.27
PDCD2-212ENST00000544755 CFAP65Q6ZU64 1925 aaKnown RBP22.97■■□□□ 1.27
PDCD2-212ENST00000544755 NUP155O75694 1391 aa22.94■■□□□ 1.26
PDCD2-212ENST00000544755 UGGT1Q9NYU2 1555 aa22.93■■□□□ 1.26
PDCD2-212ENST00000544755 STRCQ7RTU9 1775 aa22.93■■□□□ 1.26
PDCD2-212ENST00000544755 KDM5AP29375 1690 aaKnown RBP22.93■■□□□ 1.26
PDCD2-212ENST00000544755 THEMISQ8N1K5 641 aaPredicted RBP22.92■■□□□ 1.26
PDCD2-212ENST00000544755 NOS1P29475 1434 aa22.91■■□□□ 1.26
PDCD2-212ENST00000544755 PKD2Q13563 968 aa22.9■■□□□ 1.26
PDCD2-212ENST00000544755 PTPRTO14522 1441 aa22.89■■□□□ 1.25
PDCD2-212ENST00000544755 E9PCH4 1651 aa22.88■■□□□ 1.25
PDCD2-212ENST00000544755 SLC52A1Q9NWF4 448 aa22.87■■□□□ 1.25
PDCD2-212ENST00000544755 POLR1AO95602 1720 aaPredicted RBP22.87■■□□□ 1.25
PDCD2-212ENST00000544755 UBR1Q8IWV7 1749 aa22.87■■□□□ 1.25
PDCD2-212ENST00000544755 SYNMO15061 1565 aa22.85■■□□□ 1.25
PDCD2-212ENST00000544755 PIK3C2BO00750 1634 aa22.83■■□□□ 1.25
PDCD2-212ENST00000544755 ANKLE2Q86XL3 938 aa22.8■■□□□ 1.24
PDCD2-212ENST00000544755 ADGRB3O60242 1522 aa22.79■■□□□ 1.24
PDCD2-212ENST00000544755 STAG3Q9UJ98 1225 aa22.79■■□□□ 1.24
PDCD2-212ENST00000544755 SPHKAPQ2M3C7 1700 aa22.79■■□□□ 1.24
PDCD2-212ENST00000544755 SLIT1O75093 1534 aa22.78■■□□□ 1.24
PDCD2-212ENST00000544755 TRIM52Q96A61 297 aa22.78■■□□□ 1.24
PDCD2-212ENST00000544755 SETD5Q9C0A6 1442 aa22.78■■□□□ 1.24
PDCD2-212ENST00000544755 IDI1Q13907 227 aa22.76■■□□□ 1.23
PDCD2-212ENST00000544755 MED14O60244 1454 aa22.76■■□□□ 1.23
PDCD2-212ENST00000544755 ARHGAP23Q9P227 1491 aa22.76■■□□□ 1.23
PDCD2-212ENST00000544755 NCKAP5LQ9HCH0 1330 aa22.74■■□□□ 1.23
PDCD2-212ENST00000544755 NEURL4Q96JN8 1562 aa22.73■■□□□ 1.23
PDCD2-212ENST00000544755 EID1Q9Y6B2 187 aa22.73■■□□□ 1.23
PDCD2-212ENST00000544755 SCAF11Q99590 1463 aaKnown RBP22.73■■□□□ 1.23
PDCD2-212ENST00000544755 SLC4A1APQ9BWU0 796 aaKnown RBP22.72■■□□□ 1.23
PDCD2-212ENST00000544755 TMEM2Q9UHN6 1383 aa22.72■■□□□ 1.23
PDCD2-212ENST00000544755 HDGFP51858 240 aaKnown RBP22.71■■□□□ 1.23
PDCD2-212ENST00000544755 TRPM2O94759 1503 aa22.71■■□□□ 1.23
PDCD2-212ENST00000544755 TMEM131LA2VDJ0 1609 aa22.71■■□□□ 1.23
PDCD2-212ENST00000544755 IQGAP1P46940 1657 aa22.71■■□□□ 1.23
PDCD2-212ENST00000544755 NPHP4O75161 1426 aaPredicted RBP22.69■■□□□ 1.22
PDCD2-212ENST00000544755 HRCP23327 699 aa22.69■■□□□ 1.22
PDCD2-212ENST00000544755 RAB3GAP2Q9H2M9 1393 aa22.66■■□□□ 1.22
PDCD2-212ENST00000544755 MYO5BQ9ULV0 1848 aa22.66■■□□□ 1.22
PDCD2-212ENST00000544755 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
PDCD2-212ENST00000544755 KIF1BO60333 1816 aa22.64■■□□□ 1.22
PDCD2-212ENST00000544755 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.62■■□□□ 1.21
PDCD2-212ENST00000544755 MPHOSPH9Q99550 1183 aa22.62■■□□□ 1.21
PDCD2-212ENST00000544755 CLTCL1P53675 1640 aa22.6■■□□□ 1.21
PDCD2-212ENST00000544755 IQSEC2Q5JU85 1478 aa22.6■■□□□ 1.21
PDCD2-212ENST00000544755 ZFYVE9O95405 1425 aa22.6■■□□□ 1.21
PDCD2-212ENST00000544755 CHGAP10645 457 aaKnown RBP22.59■■□□□ 1.21
PDCD2-212ENST00000544755 LTBP4Q8N2S1 1624 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms