RNA–Protein interactions for RNA: ENST00000544496.5

PCMT1-211, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, human

TSL 2 BASIC

Gene PCMT1, Length 1,628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCMT1-211	ENST00000544496	DNAJC5	Q9H3Z4	198 aa		33.82	■■■■□ 3.01
PCMT1-211	ENST00000544496	TSPOAP1	O95153	1857 aa		33.82	■■■■□ 3
PCMT1-211	ENST00000544496	IQGAP3	Q86VI3	1631 aa		33.81	■■■■□ 3
PCMT1-211	ENST00000544496	A2M	P01023	1474 aa		33.8	■■■■□ 3
PCMT1-211	ENST00000544496	FOXD1	Q16676	465 aa		33.79	■■■■□ 3
PCMT1-211	ENST00000544496	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.79	■■■■□ 3	3e-9	■■■■■ 29.8
PCMT1-211	ENST00000544496	DEPDC5	O75140	1603 aa		33.75	■■■□□ 2.99
PCMT1-211	ENST00000544496	KANK1	Q14678	1352 aa		33.75	■■■□□ 2.99
PCMT1-211	ENST00000544496	ZMYM4	Q5VZL5	1548 aa		33.74	■■■□□ 2.99
PCMT1-211	ENST00000544496	RPRD2	Q5VT52	1461 aa	Known RBP	33.73	■■■□□ 2.99
PCMT1-211	ENST00000544496	KIF3B	O15066	747 aa		33.72	■■■□□ 2.99
PCMT1-211	ENST00000544496	FRMPD1	Q5SYB0	1578 aa		33.7	■■■□□ 2.99
PCMT1-211	ENST00000544496	ABCA6	Q8N139	1617 aa		33.69	■■■□□ 2.98
PCMT1-211	ENST00000544496	PPP1R15A	O75807	674 aa	Predicted RBP	33.68	■■■□□ 2.98
PCMT1-211	ENST00000544496	PRDM15	P57071	1507 aa	Predicted RBP	33.66	■■■□□ 2.98
PCMT1-211	ENST00000544496	DIP2C	Q9Y2E4	1556 aa		33.66	■■■□□ 2.98
PCMT1-211	ENST00000544496	BCORL1	Q5H9F3	1711 aa		33.64	■■■□□ 2.98
PCMT1-211	ENST00000544496	VWDE	Q8N2E2	1590 aa		33.63	■■■□□ 2.97
PCMT1-211	ENST00000544496	RNF17	Q9BXT8	1623 aa	Known RBP	33.62	■■■□□ 2.97
PCMT1-211	ENST00000544496	YEATS2	Q9ULM3	1422 aa		33.57	■■■□□ 2.96
PCMT1-211	ENST00000544496	ATP10A	O60312	1499 aa		33.57	■■■□□ 2.96
PCMT1-211	ENST00000544496	MROH1	Q8NDA8	1641 aa		33.56	■■■□□ 2.96
PCMT1-211	ENST00000544496	TET3	O43151	1660 aa		33.56	■■■□□ 2.96
PCMT1-211	ENST00000544496	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.55	■■■□□ 2.96
PCMT1-211	ENST00000544496	CCDC144A	A2RUR9	1427 aa		33.52	■■■□□ 2.96
PCMT1-211	ENST00000544496	LMTK2	Q8IWU2	1503 aa		33.52	■■■□□ 2.96
PCMT1-211	ENST00000544496	RERE	Q9P2R6	1566 aa		33.51	■■■□□ 2.96
PCMT1-211	ENST00000544496	L3MBTL2	Q969R5	705 aa		33.51	■■■□□ 2.96
PCMT1-211	ENST00000544496	TRH	P20396	242 aa	Predicted RBP	33.49	■■■□□ 2.95
PCMT1-211	ENST00000544496	COL17A1	Q9UMD9	1497 aa	Predicted RBP	33.48	■■■□□ 2.95
PCMT1-211	ENST00000544496	GGT6	Q6P531	493 aa		33.46	■■■□□ 2.95
PCMT1-211	ENST00000544496		E9PCH4	1651 aa		33.46	■■■□□ 2.95
PCMT1-211	ENST00000544496	PLA2R1	Q13018	1463 aa		33.45	■■■□□ 2.95
PCMT1-211	ENST00000544496	AGL	P35573	1532 aa		33.42	■■■□□ 2.94
PCMT1-211	ENST00000544496	PTPRT	O14522	1441 aa		33.42	■■■□□ 2.94
PCMT1-211	ENST00000544496	EFCAB6	Q5THR3	1501 aa		33.42	■■■□□ 2.94
PCMT1-211	ENST00000544496	WASHC2C	Q9Y4E1	1318 aa		33.4	■■■□□ 2.94
PCMT1-211	ENST00000544496	ARHGEF40	Q8TER5	1519 aa		33.4	■■■□□ 2.94
PCMT1-211	ENST00000544496	TRPM2	O94759	1503 aa		33.38	■■■□□ 2.93
PCMT1-211	ENST00000544496	PPP6R1	Q9UPN7	881 aa		33.38	■■■□□ 2.93
PCMT1-211	ENST00000544496	ZC3H13	Q5T200	1668 aa	Known RBP	33.36	■■■□□ 2.93
PCMT1-211	ENST00000544496	SPHKAP	Q2M3C7	1700 aa		33.35	■■■□□ 2.93
PCMT1-211	ENST00000544496	ABCC3	O15438	1527 aa		33.35	■■■□□ 2.93
PCMT1-211	ENST00000544496	CEP152	O94986	1710 aa		33.34	■■■□□ 2.93
PCMT1-211	ENST00000544496	ARHGAP31	Q2M1Z3	1444 aa		33.27	■■■□□ 2.92
PCMT1-211	ENST00000544496	CAMSAP1	Q5T5Y3	1602 aa		33.26	■■■□□ 2.91
PCMT1-211	ENST00000544496	NPAT	Q14207	1427 aa		33.25	■■■□□ 2.91
PCMT1-211	ENST00000544496	UHRF1BP1	Q6BDS2	1440 aa		33.24	■■■□□ 2.91
PCMT1-211	ENST00000544496	CNTLN	Q9NXG0	1405 aa		33.22	■■■□□ 2.91
PCMT1-211	ENST00000544496	NEURL4	Q96JN8	1562 aa		33.21	■■■□□ 2.91
PCMT1-211	ENST00000544496	STAC3	Q96MF2	364 aa		33.21	■■■□□ 2.91
PCMT1-211	ENST00000544496	DCAF11	Q8TEB1	546 aa		33.2	■■■□□ 2.91
PCMT1-211	ENST00000544496	NBPF8	Q3BBV2	869 aa		33.19	■■■□□ 2.9
PCMT1-211	ENST00000544496	CLTCL1	P53675	1640 aa		33.19	■■■□□ 2.9
PCMT1-211	ENST00000544496	SPATA31E1	Q6ZUB1	1445 aa		33.18	■■■□□ 2.9
PCMT1-211	ENST00000544496	RGL3	Q3MIN7	710 aa		33.17	■■■□□ 2.9
PCMT1-211	ENST00000544496	NOS1	P29475	1434 aa		33.13	■■■□□ 2.89
PCMT1-211	ENST00000544496	DIEXF	Q68CQ4	756 aa	Known RBP	33.13	■■■□□ 2.89
PCMT1-211	ENST00000544496	KDM2A	Q9Y2K7	1162 aa		33.12	■■■□□ 2.89
PCMT1-211	ENST00000544496	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.1	■■■□□ 2.89
PCMT1-211	ENST00000544496	ZNF326	Q5BKZ1	582 aa	Known RBP	33.1	■■■□□ 2.89
PCMT1-211	ENST00000544496	SIGLEC1	Q9BZZ2	1709 aa		33.09	■■■□□ 2.89
PCMT1-211	ENST00000544496	ESF1	Q9H501	851 aa	Known RBP	33.07	■■■□□ 2.88
PCMT1-211	ENST00000544496	RALGAPB	Q86X10	1494 aa		33.07	■■■□□ 2.88
PCMT1-211	ENST00000544496	KIF1B	O60333	1816 aa		33.07	■■■□□ 2.88
PCMT1-211	ENST00000544496	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.06	■■■□□ 2.88
PCMT1-211	ENST00000544496	PRAG1	Q86YV5	1406 aa		33.06	■■■□□ 2.88
PCMT1-211	ENST00000544496	SLC52A1	Q9NWF4	448 aa		33.03	■■■□□ 2.88
PCMT1-211	ENST00000544496	MLEC	Q14165	292 aa		33.02	■■■□□ 2.88
PCMT1-211	ENST00000544496	UGGT1	Q9NYU2	1555 aa		33.02	■■■□□ 2.88
PCMT1-211	ENST00000544496	CLTC	Q00610	1675 aa	Known RBP	33	■■■□□ 2.87
PCMT1-211	ENST00000544496	PREX1	Q8TCU6	1659 aa		32.98	■■■□□ 2.87
PCMT1-211	ENST00000544496	PIK3C2B	O00750	1634 aa		32.98	■■■□□ 2.87
PCMT1-211	ENST00000544496	HSPA5	P11021	654 aa	Known RBP	32.98	■■■□□ 2.87
PCMT1-211	ENST00000544496	SYNM	O15061	1565 aa		32.97	■■■□□ 2.87
PCMT1-211	ENST00000544496	ADGRB3	O60242	1522 aa		32.97	■■■□□ 2.87
PCMT1-211	ENST00000544496	CFAP65	Q6ZU64	1925 aa	Known RBP	32.97	■■■□□ 2.87
PCMT1-211	ENST00000544496	RPGRIP1L	Q68CZ1	1315 aa		32.95	■■■□□ 2.87
PCMT1-211	ENST00000544496	ERVK-7	P63135	1459 aa		32.94	■■■□□ 2.86
PCMT1-211	ENST00000544496	CARD11	Q9BXL7	1154 aa		32.93	■■■□□ 2.86
PCMT1-211	ENST00000544496	ROCK2	O75116	1388 aa	Known RBP	32.93	■■■□□ 2.86
PCMT1-211	ENST00000544496	TRPM1	Q7Z4N2	1603 aa		32.92	■■■□□ 2.86
PCMT1-211	ENST00000544496	MYOM2	P54296	1465 aa		32.92	■■■□□ 2.86
PCMT1-211	ENST00000544496	CHGA	P10645	457 aa	Known RBP	32.91	■■■□□ 2.86
PCMT1-211	ENST00000544496	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.9	■■■□□ 2.86
PCMT1-211	ENST00000544496	ZMYM3	Q14202	1370 aa		32.89	■■■□□ 2.86
PCMT1-211	ENST00000544496	GPRASP1	Q5JY77	1395 aa		32.89	■■■□□ 2.85
PCMT1-211	ENST00000544496	SPATA31D1	Q6ZQQ2	1576 aa		32.88	■■■□□ 2.85
PCMT1-211	ENST00000544496	USP47	Q96K76	1375 aa		32.88	■■■□□ 2.85
PCMT1-211	ENST00000544496	MADD	Q8WXG6	1647 aa		32.87	■■■□□ 2.85
PCMT1-211	ENST00000544496	IDI1	Q13907	227 aa		32.87	■■■□□ 2.85
PCMT1-211	ENST00000544496	MROH2A	A6NES4	1674 aa		32.87	■■■□□ 2.85
PCMT1-211	ENST00000544496	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.85	■■■□□ 2.85
PCMT1-211	ENST00000544496	LAMC1	P11047	1609 aa		32.85	■■■□□ 2.85
PCMT1-211	ENST00000544496	IFT172	Q9UG01	1749 aa		32.83	■■■□□ 2.85
PCMT1-211	ENST00000544496	NRXN1	Q9ULB1	1477 aa		32.79	■■■□□ 2.84
PCMT1-211	ENST00000544496	KIAA1210	Q9ULL0	1709 aa		32.78	■■■□□ 2.84
PCMT1-211	ENST00000544496	VGF	O15240	615 aa	Predicted RBP	32.77	■■■□□ 2.84
PCMT1-211	ENST00000544496	NBPF1	Q3BBV0	1214 aa		32.76	■■■□□ 2.83
PCMT1-211	ENST00000544496	PPL	O60437	1756 aa		32.76	■■■□□ 2.83

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