RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 CLASP1Q7Z460 1538 aa16.81■□□□□ 0.28
LRTOMT-221ENST00000544409 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
LRTOMT-221ENST00000544409 CARD11Q9BXL7 1154 aa16.8■□□□□ 0.28
LRTOMT-221ENST00000544409 UHRF1BP1LA0JNW5 1464 aa16.79■□□□□ 0.28
LRTOMT-221ENST00000544409 KDM2AQ9Y2K7 1162 aa16.79■□□□□ 0.28
LRTOMT-221ENST00000544409 DCAF11Q8TEB1 546 aa16.78■□□□□ 0.28
LRTOMT-221ENST00000544409 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
LRTOMT-221ENST00000544409 ANO8Q9HCE9 1232 aaPredicted RBP16.78■□□□□ 0.28
LRTOMT-221ENST00000544409 CCDC144AA2RUR9 1427 aa16.78■□□□□ 0.28
LRTOMT-221ENST00000544409 ROCK2O75116 1388 aaKnown RBP16.78■□□□□ 0.28
LRTOMT-221ENST00000544409 DHX29Q7Z478 1369 aaKnown RBP16.78■□□□□ 0.28
LRTOMT-221ENST00000544409 FAM9BQ8IZU0 186 aa16.77■□□□□ 0.28
LRTOMT-221ENST00000544409 IQGAP3Q86VI3 1631 aa16.77■□□□□ 0.28
LRTOMT-221ENST00000544409 DUOX2Q9NRD8 1548 aa16.77■□□□□ 0.28
LRTOMT-221ENST00000544409 PLCH2O75038 1416 aa16.77■□□□□ 0.27
LRTOMT-221ENST00000544409 EFCAB2Q5VUJ9 269 aa16.74■□□□□ 0.27
LRTOMT-221ENST00000544409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.27
LRTOMT-221ENST00000544409 ERBINQ96RT1 1412 aa16.73■□□□□ 0.27
LRTOMT-221ENST00000544409 TRPM1Q7Z4N2 1603 aa16.72■□□□□ 0.27
LRTOMT-221ENST00000544409 ZBED9Q6R2W3 1325 aa16.72■□□□□ 0.27
LRTOMT-221ENST00000544409 ABCC1P33527 1531 aa16.72■□□□□ 0.27
LRTOMT-221ENST00000544409 MAGI2Q86UL8 1455 aa16.71■□□□□ 0.27
LRTOMT-221ENST00000544409 PRAG1Q86YV5 1406 aa16.71■□□□□ 0.27
LRTOMT-221ENST00000544409 PLA2R1Q13018 1463 aa16.71■□□□□ 0.27
LRTOMT-221ENST00000544409 ST20-MTHFSA0A0A6YYL1 179 aa16.71■□□□□ 0.26
LRTOMT-221ENST00000544409 DEKP35659 375 aaKnown RBP16.7■□□□□ 0.26
LRTOMT-221ENST00000544409 A2MP01023 1474 aa16.68■□□□□ 0.26
LRTOMT-221ENST00000544409 ARAP3Q8WWN8 1544 aa16.67■□□□□ 0.26
LRTOMT-221ENST00000544409 ATP10AO60312 1499 aa16.67■□□□□ 0.26
LRTOMT-221ENST00000544409 RGL3Q3MIN7 710 aa16.67■□□□□ 0.26
LRTOMT-221ENST00000544409 TRAPPC8Q9Y2L5 1435 aa16.66■□□□□ 0.26
LRTOMT-221ENST00000544409 E9PCH4 1651 aa16.66■□□□□ 0.26
LRTOMT-221ENST00000544409 LAMC1P11047 1609 aa16.66■□□□□ 0.26
LRTOMT-221ENST00000544409 CNGB1Q14028 1251 aaPredicted RBP16.66■□□□□ 0.26
LRTOMT-221ENST00000544409 EIF2AK4Q9P2K8 1649 aaKnown RBP16.65■□□□□ 0.26
LRTOMT-221ENST00000544409 ERICH6BQ5W0A0 696 aa16.64■□□□□ 0.25
LRTOMT-221ENST00000544409 GPRASP1Q5JY77 1395 aa16.64■□□□□ 0.25
LRTOMT-221ENST00000544409 RTEL1-TNFRSF6BF6WH68 1400 aa16.63■□□□□ 0.25
LRTOMT-221ENST00000544409 KTN1Q86UP2 1357 aaKnown RBP16.63■□□□□ 0.25
LRTOMT-221ENST00000544409 SPAG9O60271 1321 aaKnown RBP16.62■□□□□ 0.25
LRTOMT-221ENST00000544409 IRX6P78412 446 aaPredicted RBP16.62■□□□□ 0.25
LRTOMT-221ENST00000544409 PRDM15P57071 1507 aaPredicted RBP16.61■□□□□ 0.25
LRTOMT-221ENST00000544409 FANCIQ9NVI1 1328 aa16.61■□□□□ 0.25
LRTOMT-221ENST00000544409 WDR7Q9Y4E6 1490 aa16.61■□□□□ 0.25
LRTOMT-221ENST00000544409 ZFYVE16Q7Z3T8 1539 aa16.61■□□□□ 0.25
LRTOMT-221ENST00000544409 NBPF1Q3BBV0 1214 aa16.6■□□□□ 0.25
LRTOMT-221ENST00000544409 RALBP1Q15311 655 aa16.59■□□□□ 0.25
LRTOMT-221ENST00000544409 TMC1Q8TDI8 760 aa16.59■□□□□ 0.25
LRTOMT-221ENST00000544409 MYBBP1AQ9BQG0 1328 aaKnown RBP16.58■□□□□ 0.24
LRTOMT-221ENST00000544409 ABCA9Q8IUA7 1624 aa16.58■□□□□ 0.24
LRTOMT-221ENST00000544409 PNISRQ8TF01 805 aaKnown RBP16.57■□□□□ 0.24
LRTOMT-221ENST00000544409 BRD4O60885 1362 aaPredicted RBP16.57■□□□□ 0.24
LRTOMT-221ENST00000544409 AFAP1Q8N556 730 aa16.57■□□□□ 0.24
LRTOMT-221ENST00000544409 SALL2Q9Y467 1007 aaPredicted RBP16.57■□□□□ 0.24
LRTOMT-221ENST00000544409 COL17A1Q9UMD9 1497 aaPredicted RBP16.56■□□□□ 0.24
LRTOMT-221ENST00000544409 SMG6Q86US8 1419 aaKnown RBP16.56■□□□□ 0.24
LRTOMT-221ENST00000544409 DEPDC5O75140 1603 aa16.56■□□□□ 0.24
LRTOMT-221ENST00000544409 RNF17Q9BXT8 1623 aaKnown RBP16.55■□□□□ 0.24
LRTOMT-221ENST00000544409 FANCAO15360 1455 aa16.55■□□□□ 0.24
LRTOMT-221ENST00000544409 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
LRTOMT-221ENST00000544409 MYT1LQ9UL68 1186 aa16.55■□□□□ 0.24
LRTOMT-221ENST00000544409 TRPM2O94759 1503 aa16.55■□□□□ 0.24
LRTOMT-221ENST00000544409 ATP7AQ04656 1500 aa16.55■□□□□ 0.24
LRTOMT-221ENST00000544409 INO80Q9ULG1 1556 aaPredicted RBP16.54■□□□□ 0.24
LRTOMT-221ENST00000544409 SPHKAPQ2M3C7 1700 aa16.54■□□□□ 0.24
LRTOMT-221ENST00000544409 CEP152O94986 1710 aa16.53■□□□□ 0.24
LRTOMT-221ENST00000544409 TET3O43151 1660 aa16.53■□□□□ 0.24
LRTOMT-221ENST00000544409 CCDC136Q96JN2 1154 aa16.52■□□□□ 0.24
LRTOMT-221ENST00000544409 TESK2Q96S53 571 aa16.52■□□□□ 0.24
LRTOMT-221ENST00000544409 NUDCQ9Y266 331 aa16.52■□□□□ 0.24
LRTOMT-221ENST00000544409 LRPPRCP42704 1394 aaKnown RBP16.52■□□□□ 0.23
LRTOMT-221ENST00000544409 KANK1Q14678 1352 aa16.51■□□□□ 0.23
LRTOMT-221ENST00000544409 MADDQ8WXG6 1647 aa16.51■□□□□ 0.23
LRTOMT-221ENST00000544409 DISP3Q9P2K9 1392 aa16.51■□□□□ 0.23
LRTOMT-221ENST00000544409 NBR1Q14596 966 aa16.51■□□□□ 0.23
LRTOMT-221ENST00000544409 PARD3Q8TEW0 1356 aa16.51■□□□□ 0.23
LRTOMT-221ENST00000544409 PTPRTO14522 1441 aa16.51■□□□□ 0.23
LRTOMT-221ENST00000544409 ADGRL1O94910 1474 aa16.51■□□□□ 0.23
LRTOMT-221ENST00000544409 TMF1P82094 1093 aa16.5■□□□□ 0.23
LRTOMT-221ENST00000544409 CLTCL1P53675 1640 aa16.49■□□□□ 0.23
LRTOMT-221ENST00000544409 NLRP13Q86W25 1043 aa16.49■□□□□ 0.23
LRTOMT-221ENST00000544409 STAC3Q96MF2 364 aa16.49■□□□□ 0.23
LRTOMT-221ENST00000544409 VWDEQ8N2E2 1590 aa16.49■□□□□ 0.23
LRTOMT-221ENST00000544409 SCAPERQ9BY12 1400 aa16.48■□□□□ 0.23
LRTOMT-221ENST00000544409 WASHC2CQ9Y4E1 1318 aa16.48■□□□□ 0.23
LRTOMT-221ENST00000544409 ASXL2Q76L83 1435 aa16.48■□□□□ 0.23
LRTOMT-221ENST00000544409 PER1O15534 1290 aaPredicted RBP16.48■□□□□ 0.23
LRTOMT-221ENST00000544409 IQGAP1P46940 1657 aa16.47■□□□□ 0.23
LRTOMT-221ENST00000544409 KIF3BO15066 747 aa16.45■□□□□ 0.22
LRTOMT-221ENST00000544409 PANK3Q9H999 370 aa16.44■□□□□ 0.22
LRTOMT-221ENST00000544409 RNF123Q5XPI4 1314 aa16.43■□□□□ 0.22
LRTOMT-221ENST00000544409 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
LRTOMT-221ENST00000544409 MROH1Q8NDA8 1641 aa16.43■□□□□ 0.22
LRTOMT-221ENST00000544409 SCAF11Q99590 1463 aaKnown RBP16.42■□□□□ 0.22
LRTOMT-221ENST00000544409 KIAA1210Q9ULL0 1709 aa16.41■□□□□ 0.22
LRTOMT-221ENST00000544409 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
LRTOMT-221ENST00000544409 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
LRTOMT-221ENST00000544409 B4GALNT3Q6L9W6 998 aa16.4■□□□□ 0.22
LRTOMT-221ENST00000544409 SENP3-EIF4A1A0A087X0R7 540 aa16.4■□□□□ 0.22
LRTOMT-221ENST00000544409 RTN4Q9NQC3 1192 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 202.9 ms