RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 INO80Q9ULG1 1556 aaPredicted RBP19.4■□□□□ 0.7
HCFC2-202ENST00000544223 ACIN1Q9UKV3 1341 aaKnown RBP19.4■□□□□ 0.7
HCFC2-202ENST00000544223 KIDINS220Q9ULH0 1771 aa19.39■□□□□ 0.69
HCFC2-202ENST00000544223 RTEL1-TNFRSF6BF6WH68 1400 aa19.38■□□□□ 0.69
HCFC2-202ENST00000544223 C11orf95C9JLR9 678 aaPredicted RBP19.36■□□□□ 0.69
HCFC2-202ENST00000544223 IQGAP3Q86VI3 1631 aa19.36■□□□□ 0.69
HCFC2-202ENST00000544223 ZNF518AQ6AHZ1 1483 aa19.35■□□□□ 0.69
HCFC2-202ENST00000544223 POGZQ7Z3K3 1410 aa19.35■□□□□ 0.69
HCFC2-202ENST00000544223 GGT6Q6P531 493 aa19.34■□□□□ 0.69
HCFC2-202ENST00000544223 CCDC144AA2RUR9 1427 aa19.34■□□□□ 0.69
HCFC2-202ENST00000544223 EIF4G2P78344 907 aaKnown RBP eCLIP19.33■□□□□ 0.69
HCFC2-202ENST00000544223 DHX29Q7Z478 1369 aaKnown RBP19.32■□□□□ 0.68
HCFC2-202ENST00000544223 MAGI2Q86UL8 1455 aa19.32■□□□□ 0.68
HCFC2-202ENST00000544223 WASHC2AQ641Q2 1341 aa19.31■□□□□ 0.68
HCFC2-202ENST00000544223 CFAP65Q6ZU64 1925 aaKnown RBP19.31■□□□□ 0.68
HCFC2-202ENST00000544223 E9PCH4 1651 aa19.3■□□□□ 0.68
HCFC2-202ENST00000544223 MAP3K4Q9Y6R4 1608 aa19.3■□□□□ 0.68
HCFC2-202ENST00000544223 POLR3GLQ9BT43 218 aa19.28■□□□□ 0.68
HCFC2-202ENST00000544223 DIP2BQ9P265 1576 aa19.27■□□□□ 0.68
HCFC2-202ENST00000544223 YEATS2Q9ULM3 1422 aa19.26■□□□□ 0.67
HCFC2-202ENST00000544223 ABCA6Q8N139 1617 aa19.26■□□□□ 0.67
HCFC2-202ENST00000544223 A2MP01023 1474 aa19.26■□□□□ 0.67
HCFC2-202ENST00000544223 MROH1Q8NDA8 1641 aa19.26■□□□□ 0.67
HCFC2-202ENST00000544223 KDM5CP41229 1560 aa19.26■□□□□ 0.67
HCFC2-202ENST00000544223 FRMPD1Q5SYB0 1578 aa19.26■□□□□ 0.67
HCFC2-202ENST00000544223 CFAP74Q9C0B2 1584 aa19.25■□□□□ 0.67
HCFC2-202ENST00000544223 UGGT1Q9NYU2 1555 aa19.25■□□□□ 0.67
HCFC2-202ENST00000544223 CNGB1Q14028 1251 aaPredicted RBP19.25■□□□□ 0.67
HCFC2-202ENST00000544223 NBPF1Q3BBV0 1214 aa19.25■□□□□ 0.67
HCFC2-202ENST00000544223 HECW2Q9P2P5 1572 aa19.24■□□□□ 0.67
HCFC2-202ENST00000544223 DEPDC5O75140 1603 aa19.24■□□□□ 0.67
HCFC2-202ENST00000544223 CARD11Q9BXL7 1154 aa19.23■□□□□ 0.67
HCFC2-202ENST00000544223 ATP10AO60312 1499 aa19.23■□□□□ 0.67
HCFC2-202ENST00000544223 NEO1Q92859 1461 aa19.23■□□□□ 0.67
HCFC2-202ENST00000544223 KANK1Q14678 1352 aa19.22■□□□□ 0.67
HCFC2-202ENST00000544223 CEP152O94986 1710 aa19.21■□□□□ 0.67
HCFC2-202ENST00000544223 USP47Q96K76 1375 aa19.21■□□□□ 0.67
HCFC2-202ENST00000544223 RICTORQ6R327 1708 aa19.21■□□□□ 0.67
HCFC2-202ENST00000544223 MLH3Q9UHC1 1453 aa19.21■□□□□ 0.67
HCFC2-202ENST00000544223 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
HCFC2-202ENST00000544223 SPATA31E1Q6ZUB1 1445 aa19.2■□□□□ 0.66
HCFC2-202ENST00000544223 PPRC1Q5VV67 1664 aaKnown RBP19.19■□□□□ 0.66
HCFC2-202ENST00000544223 GLI2P10070 1586 aa19.18■□□□□ 0.66
HCFC2-202ENST00000544223 PRDM15P57071 1507 aaPredicted RBP19.18■□□□□ 0.66
HCFC2-202ENST00000544223 WASHC2CQ9Y4E1 1318 aa19.17■□□□□ 0.66
HCFC2-202ENST00000544223 CLTCL1P53675 1640 aa19.17■□□□□ 0.66
HCFC2-202ENST00000544223 TET3O43151 1660 aa19.17■□□□□ 0.66
HCFC2-202ENST00000544223 ST20-MTHFSA0A0A6YYL1 179 aa19.17■□□□□ 0.66
HCFC2-202ENST00000544223 VWDEQ8N2E2 1590 aa19.17■□□□□ 0.66
HCFC2-202ENST00000544223 SPHKAPQ2M3C7 1700 aa19.17■□□□□ 0.66
HCFC2-202ENST00000544223 ROCK2O75116 1388 aaKnown RBP19.16■□□□□ 0.66
HCFC2-202ENST00000544223 KIF7Q2M1P5 1343 aa19.16■□□□□ 0.66
HCFC2-202ENST00000544223 DIP2CQ9Y2E4 1556 aa19.16■□□□□ 0.66
HCFC2-202ENST00000544223 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
HCFC2-202ENST00000544223 BCORL1Q5H9F3 1711 aa19.16■□□□□ 0.66
HCFC2-202ENST00000544223 UHRF1BP1Q6BDS2 1440 aa19.16■□□□□ 0.66
HCFC2-202ENST00000544223 EIF2AK4Q9P2K8 1649 aaKnown RBP19.16■□□□□ 0.66
HCFC2-202ENST00000544223 KIF13AQ9H1H9 1805 aa19.15■□□□□ 0.66
HCFC2-202ENST00000544223 PRAG1Q86YV5 1406 aa19.15■□□□□ 0.66
HCFC2-202ENST00000544223 CCDC7Q96M83 1385 aa19.14■□□□□ 0.65
HCFC2-202ENST00000544223 COL17A1Q9UMD9 1497 aaPredicted RBP19.14■□□□□ 0.65
HCFC2-202ENST00000544223 MLECQ14165 292 aa19.13■□□□□ 0.65
HCFC2-202ENST00000544223 RALGAPBQ86X10 1494 aa19.13■□□□□ 0.65
HCFC2-202ENST00000544223 TRPM2O94759 1503 aa19.12■□□□□ 0.65
HCFC2-202ENST00000544223 NUTM2DQ5VT03 806 aaPredicted RBP19.11■□□□□ 0.65
HCFC2-202ENST00000544223 PTPRTO14522 1441 aa19.11■□□□□ 0.65
HCFC2-202ENST00000544223 ANP32CO43423 234 aa19.11■□□□□ 0.65
HCFC2-202ENST00000544223 EFCAB6Q5THR3 1501 aa19.1■□□□□ 0.65
HCFC2-202ENST00000544223 NPATQ14207 1427 aa19.1■□□□□ 0.65
HCFC2-202ENST00000544223 RNF17Q9BXT8 1623 aaKnown RBP19.09■□□□□ 0.65
HCFC2-202ENST00000544223 TRPM1Q7Z4N2 1603 aa19.08■□□□□ 0.65
HCFC2-202ENST00000544223 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
HCFC2-202ENST00000544223 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
HCFC2-202ENST00000544223 SIGLEC1Q9BZZ2 1709 aa19.06■□□□□ 0.64
HCFC2-202ENST00000544223 ABCC3O15438 1527 aa19.05■□□□□ 0.64
HCFC2-202ENST00000544223 ADGRF5Q8IZF2 1346 aa19.04■□□□□ 0.64
HCFC2-202ENST00000544223 FBXO31Q5XUX0 539 aaPredicted RBP19.04■□□□□ 0.64
HCFC2-202ENST00000544223 MROH2AA6NES4 1674 aa19.04■□□□□ 0.64
HCFC2-202ENST00000544223 CCDC184Q52MB2 194 aa19.03■□□□□ 0.64
HCFC2-202ENST00000544223 CNTLNQ9NXG0 1405 aa19.02■□□□□ 0.63
HCFC2-202ENST00000544223 TRHP20396 242 aaPredicted RBP19.01■□□□□ 0.63
HCFC2-202ENST00000544223 CFAP70Q5T0N1 1121 aa19.01■□□□□ 0.63
HCFC2-202ENST00000544223 CAMSAP1Q5T5Y3 1602 aa19■□□□□ 0.63
HCFC2-202ENST00000544223 LMTK2Q8IWU2 1503 aa18.99■□□□□ 0.63
HCFC2-202ENST00000544223 MADDQ8WXG6 1647 aa18.99■□□□□ 0.63
HCFC2-202ENST00000544223 KIF1BO60333 1816 aa18.98■□□□□ 0.63
HCFC2-202ENST00000544223 ZMYM4Q5VZL5 1548 aa18.96■□□□□ 0.63
HCFC2-202ENST00000544223 POLR1AO95602 1720 aaPredicted RBP18.96■□□□□ 0.63
HCFC2-202ENST00000544223 IDI1Q13907 227 aa18.96■□□□□ 0.63
HCFC2-202ENST00000544223 NOS1P29475 1434 aa18.95■□□□□ 0.62
HCFC2-202ENST00000544223 DISP3Q9P2K9 1392 aa18.95■□□□□ 0.62
HCFC2-202ENST00000544223 TESK2Q96S53 571 aa18.95■□□□□ 0.62
HCFC2-202ENST00000544223 GTF3C3Q9Y5Q9 886 aa18.95■□□□□ 0.62
HCFC2-202ENST00000544223 SYNMO15061 1565 aa18.94■□□□□ 0.62
HCFC2-202ENST00000544223 TMEM132EQ6IEE7 984 aa18.93■□□□□ 0.62
HCFC2-202ENST00000544223 PLPPR3Q6T4P5 718 aa18.93■□□□□ 0.62
HCFC2-202ENST00000544223 ARID4BQ4LE39 1312 aaPredicted RBP18.93■□□□□ 0.62
HCFC2-202ENST00000544223 GPRASP1Q5JY77 1395 aa18.93■□□□□ 0.62
HCFC2-202ENST00000544223 PRKRIP1Q9H875 184 aaPredicted RBP18.93■□□□□ 0.62
HCFC2-202ENST00000544223 SENP3-EIF4A1A0A087X0R7 540 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms