RNA–Protein interactions for RNA: ENST00000544001.6

ITFG1-204, Transcript of integrin alpha FG-GAP repeat containing 1, humanhuman

TSL 2 BASIC

Gene ITFG1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITFG1-204ENST00000544001 WDR7Q9Y4E6 1490 aa18.72■□□□□ 0.59
ITFG1-204ENST00000544001 PELP1Q8IZL8 1130 aaKnown RBP18.72■□□□□ 0.59
ITFG1-204ENST00000544001 ZNF326Q5BKZ1 582 aaKnown RBP18.71■□□□□ 0.59
ITFG1-204ENST00000544001 TRAPPC8Q9Y2L5 1435 aa18.71■□□□□ 0.59
ITFG1-204ENST00000544001 DEPDC5O75140 1603 aa18.7■□□□□ 0.58
ITFG1-204ENST00000544001 PLA2R1Q13018 1463 aa18.7■□□□□ 0.58
ITFG1-204ENST00000544001 INO80Q9ULG1 1556 aaPredicted RBP18.7■□□□□ 0.58
ITFG1-204ENST00000544001 E9PCH4 1651 aa18.69■□□□□ 0.58
ITFG1-204ENST00000544001 EFCAB2Q5VUJ9 269 aa18.69■□□□□ 0.58
ITFG1-204ENST00000544001 CCDC144AA2RUR9 1427 aa18.68■□□□□ 0.58
ITFG1-204ENST00000544001 LAMC1P11047 1609 aa18.67■□□□□ 0.58
ITFG1-204ENST00000544001 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
ITFG1-204ENST00000544001 ATP10AO60312 1499 aa18.65■□□□□ 0.58
ITFG1-204ENST00000544001 CEP152O94986 1710 aa18.65■□□□□ 0.58
ITFG1-204ENST00000544001 A2MP01023 1474 aa18.64■□□□□ 0.57
ITFG1-204ENST00000544001 PRKRIP1Q9H875 184 aaPredicted RBP18.64■□□□□ 0.57
ITFG1-204ENST00000544001 EIF2AK4Q9P2K8 1649 aaKnown RBP18.64■□□□□ 0.57
ITFG1-204ENST00000544001 RTEL1-TNFRSF6BF6WH68 1400 aa18.63■□□□□ 0.57
ITFG1-204ENST00000544001 PRAG1Q86YV5 1406 aa18.63■□□□□ 0.57
ITFG1-204ENST00000544001 ATP7AQ04656 1500 aa18.63■□□□□ 0.57
ITFG1-204ENST00000544001 RNF17Q9BXT8 1623 aaKnown RBP18.62■□□□□ 0.57
ITFG1-204ENST00000544001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.62■□□□□ 0.57
ITFG1-204ENST00000544001 FANCAO15360 1455 aa18.62■□□□□ 0.57
ITFG1-204ENST00000544001 TET3O43151 1660 aa18.62■□□□□ 0.57
ITFG1-204ENST00000544001 DHX29Q7Z478 1369 aaKnown RBP18.61■□□□□ 0.57
ITFG1-204ENST00000544001 DCAF11Q8TEB1 546 aa18.6■□□□□ 0.57
ITFG1-204ENST00000544001 CARD11Q9BXL7 1154 aa18.6■□□□□ 0.57
ITFG1-204ENST00000544001 ARID4BQ4LE39 1312 aaPredicted RBP18.59■□□□□ 0.57
ITFG1-204ENST00000544001 CCDC184Q52MB2 194 aa18.59■□□□□ 0.57
ITFG1-204ENST00000544001 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
ITFG1-204ENST00000544001 PRDM15P57071 1507 aaPredicted RBP18.59■□□□□ 0.57
ITFG1-204ENST00000544001 ASXL2Q76L83 1435 aa18.58■□□□□ 0.56
ITFG1-204ENST00000544001 SPAG9O60271 1321 aaKnown RBP18.57■□□□□ 0.56
ITFG1-204ENST00000544001 TRPM2O94759 1503 aa18.57■□□□□ 0.56
ITFG1-204ENST00000544001 VWDEQ8N2E2 1590 aa18.57■□□□□ 0.56
ITFG1-204ENST00000544001 ROCK2O75116 1388 aaKnown RBP18.57■□□□□ 0.56
ITFG1-204ENST00000544001 ADGRL1O94910 1474 aa18.56■□□□□ 0.56
ITFG1-204ENST00000544001 KIDINS220Q9ULH0 1771 aa18.56■□□□□ 0.56
ITFG1-204ENST00000544001 HNRNPUQ00839 825 aaKnown RBP eCLIP18.56■□□□□ 0.56
ITFG1-204ENST00000544001 CLTCL1P53675 1640 aa18.56■□□□□ 0.56
ITFG1-204ENST00000544001 MROH1Q8NDA8 1641 aa18.56■□□□□ 0.56
ITFG1-204ENST00000544001 CYB5RLQ6IPT4 315 aa18.55■□□□□ 0.56
ITFG1-204ENST00000544001 MADDQ8WXG6 1647 aa18.54■□□□□ 0.56
ITFG1-204ENST00000544001 GPRASP1Q5JY77 1395 aa18.54■□□□□ 0.56
ITFG1-204ENST00000544001 AFAP1Q8N556 730 aa18.53■□□□□ 0.56
ITFG1-204ENST00000544001 CFAP74Q9C0B2 1584 aa18.53■□□□□ 0.56
ITFG1-204ENST00000544001 IQGAP1P46940 1657 aa18.52■□□□□ 0.55
ITFG1-204ENST00000544001 ST20-MTHFSA0A0A6YYL1 179 aa18.51■□□□□ 0.55
ITFG1-204ENST00000544001 POLR3GLQ9BT43 218 aa18.51■□□□□ 0.55
ITFG1-204ENST00000544001 MRS2Q9HD23 443 aa18.51■□□□□ 0.55
ITFG1-204ENST00000544001 SCAPERQ9BY12 1400 aa18.5■□□□□ 0.55
ITFG1-204ENST00000544001 RGL3Q3MIN7 710 aa18.49■□□□□ 0.55
ITFG1-204ENST00000544001 FKBP8Q14318 412 aa18.49■□□□□ 0.55
ITFG1-204ENST00000544001 KIF1BO60333 1816 aa18.47■□□□□ 0.55
ITFG1-204ENST00000544001 COL17A1Q9UMD9 1497 aaPredicted RBP18.47■□□□□ 0.55
ITFG1-204ENST00000544001 PTPRTO14522 1441 aa18.47■□□□□ 0.55
ITFG1-204ENST00000544001 IFT172Q9UG01 1749 aa18.46■□□□□ 0.55
ITFG1-204ENST00000544001 PPRC1Q5VV67 1664 aaKnown RBP18.45■□□□□ 0.54
ITFG1-204ENST00000544001 KIAA1210Q9ULL0 1709 aa18.45■□□□□ 0.54
ITFG1-204ENST00000544001 NBPF1Q3BBV0 1214 aa18.44■□□□□ 0.54
ITFG1-204ENST00000544001 FAM9BQ8IZU0 186 aa18.44■□□□□ 0.54
ITFG1-204ENST00000544001 NEURL4Q96JN8 1562 aa18.44■□□□□ 0.54
ITFG1-204ENST00000544001 EFCAB6Q5THR3 1501 aa18.44■□□□□ 0.54
ITFG1-204ENST00000544001 NEFLP07196 543 aa18.44■□□□□ 0.54
ITFG1-204ENST00000544001 ZNF518AQ6AHZ1 1483 aa18.43■□□□□ 0.54
ITFG1-204ENST00000544001 MROH2AA6NES4 1674 aa18.43■□□□□ 0.54
ITFG1-204ENST00000544001 BCANQ96GW7 911 aa18.42■□□□□ 0.54
ITFG1-204ENST00000544001 HECW2Q9P2P5 1572 aa18.41■□□□□ 0.54
ITFG1-204ENST00000544001 KANK1Q14678 1352 aa18.41■□□□□ 0.54
ITFG1-204ENST00000544001 TRHP20396 242 aaPredicted RBP18.41■□□□□ 0.54
ITFG1-204ENST00000544001 ZBED9Q6R2W3 1325 aa18.41■□□□□ 0.54
ITFG1-204ENST00000544001 FRMPD1Q5SYB0 1578 aa18.39■□□□□ 0.53
ITFG1-204ENST00000544001 ABCA6Q8N139 1617 aa18.39■□□□□ 0.53
ITFG1-204ENST00000544001 UGGT1Q9NYU2 1555 aa18.38■□□□□ 0.53
ITFG1-204ENST00000544001 POGZQ7Z3K3 1410 aa18.38■□□□□ 0.53
ITFG1-204ENST00000544001 LMTK2Q8IWU2 1503 aa18.38■□□□□ 0.53
ITFG1-204ENST00000544001 DISP3Q9P2K9 1392 aa18.37■□□□□ 0.53
ITFG1-204ENST00000544001 CFAP65Q6ZU64 1925 aaKnown RBP18.37■□□□□ 0.53
ITFG1-204ENST00000544001 MAP3K4Q9Y6R4 1608 aa18.37■□□□□ 0.53
ITFG1-204ENST00000544001 CNGB1Q14028 1251 aaPredicted RBP18.37■□□□□ 0.53
ITFG1-204ENST00000544001 KTN1Q86UP2 1357 aaKnown RBP18.37■□□□□ 0.53
ITFG1-204ENST00000544001 KIF3BO15066 747 aa18.36■□□□□ 0.53
ITFG1-204ENST00000544001 CD109Q6YHK3 1445 aa18.36■□□□□ 0.53
ITFG1-204ENST00000544001 TESK2Q96S53 571 aa18.35■□□□□ 0.53
ITFG1-204ENST00000544001 MYOM1P52179 1685 aa18.34■□□□□ 0.53
ITFG1-204ENST00000544001 NPM1P06748 294 aaKnown RBP eCLIP18.34■□□□□ 0.53
ITFG1-204ENST00000544001 MYT1LQ9UL68 1186 aa18.34■□□□□ 0.53
ITFG1-204ENST00000544001 MLH3Q9UHC1 1453 aa18.33■□□□□ 0.53
ITFG1-204ENST00000544001 RICTORQ6R327 1708 aa18.33■□□□□ 0.52
ITFG1-204ENST00000544001 MYOM2P54296 1465 aa18.32■□□□□ 0.52
ITFG1-204ENST00000544001 BRD4O60885 1362 aaPredicted RBP18.31■□□□□ 0.52
ITFG1-204ENST00000544001 PARD3Q8TEW0 1356 aa18.31■□□□□ 0.52
ITFG1-204ENST00000544001 PPLO60437 1756 aa18.31■□□□□ 0.52
ITFG1-204ENST00000544001 MYBBP1AQ9BQG0 1328 aaKnown RBP18.31■□□□□ 0.52
ITFG1-204ENST00000544001 CAMSAP1Q5T5Y3 1602 aa18.3■□□□□ 0.52
ITFG1-204ENST00000544001 ADGRB3O60242 1522 aa18.29■□□□□ 0.52
ITFG1-204ENST00000544001 SCAF11Q99590 1463 aaKnown RBP18.29■□□□□ 0.52
ITFG1-204ENST00000544001 SYNMO15061 1565 aa18.29■□□□□ 0.52
ITFG1-204ENST00000544001 RALBP1Q15311 655 aa18.29■□□□□ 0.52
ITFG1-204ENST00000544001 KDM5AP29375 1690 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms