RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 WASHC2CQ9Y4E1 1318 aa36.01■■■■□ 3.35
CDKN3-207ENST00000543789 ZNF142P52746 1687 aaPredicted RBP36■■■■□ 3.35
CDKN3-207ENST00000543789 A2ML1A8K2U0 1454 aa35.99■■■■□ 3.35
CDKN3-207ENST00000543789 TNRQ92752 1358 aa35.97■■■■□ 3.35
CDKN3-207ENST00000543789 UBAP1LF5GYI3 381 aa35.95■■■■□ 3.35
CDKN3-207ENST00000543789 ILDR2Q71H61 639 aa35.95■■■■□ 3.35
CDKN3-207ENST00000543789 LOC105371045A0A1W2PR82 267 aa35.9■■■■□ 3.34
CDKN3-207ENST00000543789 PZPP20742 1482 aa35.9■■■■□ 3.34
CDKN3-207ENST00000543789 KDM5DQ9BY66 1539 aa35.89■■■■□ 3.34
CDKN3-207ENST00000543789 DNMT1P26358 1616 aaKnown RBP35.88■■■■□ 3.33
CDKN3-207ENST00000543789 FAM135AQ9P2D6 1515 aa35.88■■■■□ 3.33
CDKN3-207ENST00000543789 VPS8Q8N3P4 1428 aa35.86■■■■□ 3.33
CDKN3-207ENST00000543789 LRRC9Q6ZRR7 1453 aa35.86■■■■□ 3.33
CDKN3-207ENST00000543789 THEMISQ8N1K5 641 aaPredicted RBP35.85■■■■□ 3.33
CDKN3-207ENST00000543789 ARHGEF5Q12774 1597 aa35.85■■■■□ 3.33
CDKN3-207ENST00000543789 MIA2Q96PC5 1412 aa35.84■■■■□ 3.33
CDKN3-207ENST00000543789 ANKLE2Q86XL3 938 aa35.84■■■■□ 3.33
CDKN3-207ENST00000543789 KANK4Q5T7N3 995 aaPredicted RBP35.81■■■■□ 3.32
CDKN3-207ENST00000543789 SOCS7O14512 581 aa35.79■■■■□ 3.32
CDKN3-207ENST00000543789 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.78■■■■□ 3.32
CDKN3-207ENST00000543789 NLRP1Q9C000 1473 aa35.76■■■■□ 3.32
CDKN3-207ENST00000543789 SPATA31D1Q6ZQQ2 1576 aa35.73■■■■□ 3.31
CDKN3-207ENST00000543789 SHANK2Q9UPX8 1470 aa35.7■■■■□ 3.31
CDKN3-207ENST00000543789 NEURL4Q96JN8 1562 aa35.68■■■■□ 3.3
CDKN3-207ENST00000543789 UGGT1Q9NYU2 1555 aa35.68■■■■□ 3.3
CDKN3-207ENST00000543789 MAP3K1Q13233 1512 aa35.68■■■■□ 3.3
CDKN3-207ENST00000543789 TOM1O60784 492 aa35.68■■■■□ 3.3
CDKN3-207ENST00000543789 MYOM3Q5VTT5 1437 aa35.66■■■■□ 3.3
CDKN3-207ENST00000543789 MAST1Q9Y2H9 1570 aa35.66■■■■□ 3.3
CDKN3-207ENST00000543789 CPS1P31327 1500 aa35.66■■■■□ 3.3
CDKN3-207ENST00000543789 SCAF1Q9H7N4 1312 aaKnown RBP35.64■■■■□ 3.3
CDKN3-207ENST00000543789 ABCC3O15438 1527 aa35.64■■■■□ 3.3
CDKN3-207ENST00000543789 PIP4K2BP78356 416 aa35.64■■■■□ 3.3
CDKN3-207ENST00000543789 NPHP4O75161 1426 aaPredicted RBP35.64■■■■□ 3.3
CDKN3-207ENST00000543789 MED14O60244 1454 aa35.61■■■■□ 3.29
CDKN3-207ENST00000543789 RNF17Q9BXT8 1623 aaKnown RBP35.61■■■■□ 3.29
CDKN3-207ENST00000543789 POLR1AO95602 1720 aaPredicted RBP35.6■■■■□ 3.29
CDKN3-207ENST00000543789 HSPA1LP34931 641 aa35.58■■■■□ 3.29
CDKN3-207ENST00000543789 ERVK-7P63135 1459 aa35.56■■■■□ 3.28
CDKN3-207ENST00000543789 APLP2Q06481 763 aa35.55■■■■□ 3.28
CDKN3-207ENST00000543789 EIF2AK4Q9P2K8 1649 aaKnown RBP35.54■■■■□ 3.28
CDKN3-207ENST00000543789 DUOX2Q9NRD8 1548 aa35.53■■■■□ 3.28
CDKN3-207ENST00000543789 VWDEQ8N2E2 1590 aa35.53■■■■□ 3.28
CDKN3-207ENST00000543789 RRP7BPQ9NSQ0 103 aa35.53■■■■□ 3.28
CDKN3-207ENST00000543789 DEPDC5O75140 1603 aa35.53■■■■□ 3.28
CDKN3-207ENST00000543789 ZC3H13Q5T200 1668 aaKnown RBP35.51■■■■□ 3.28
CDKN3-207ENST00000543789 KIF15Q9NS87 1388 aa35.51■■■■□ 3.27
CDKN3-207ENST00000543789 ABCC5O15440 1437 aa35.49■■■■□ 3.27
CDKN3-207ENST00000543789 MROH1Q8NDA8 1641 aa35.48■■■■□ 3.27
CDKN3-207ENST00000543789 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.45■■■■□ 3.27
CDKN3-207ENST00000543789 ARHGAP31Q2M1Z3 1444 aa35.42■■■■□ 3.26
CDKN3-207ENST00000543789 ERBINQ96RT1 1412 aa35.42■■■■□ 3.26
CDKN3-207ENST00000543789 TXNDC2Q86VQ3 553 aa35.42■■■■□ 3.26
CDKN3-207ENST00000543789 IQGAP1P46940 1657 aa35.41■■■■□ 3.26
CDKN3-207ENST00000543789 LTKP29376 864 aa35.4■■■■□ 3.26
CDKN3-207ENST00000543789 SCAF11Q99590 1463 aaKnown RBP35.36■■■■□ 3.25
CDKN3-207ENST00000543789 DAPK1P53355 1430 aa35.36■■■■□ 3.25
CDKN3-207ENST00000543789 EID1Q9Y6B2 187 aa35.36■■■■□ 3.25
CDKN3-207ENST00000543789 LRRC7Q96NW7 1537 aa35.36■■■■□ 3.25
CDKN3-207ENST00000543789 KANK1Q14678 1352 aa35.35■■■■□ 3.25
CDKN3-207ENST00000543789 CEP152O94986 1710 aa35.35■■■■□ 3.25
CDKN3-207ENST00000543789 PRDM15P57071 1507 aaPredicted RBP35.34■■■■□ 3.25
CDKN3-207ENST00000543789 CHIC2Q9UKJ5 165 aa35.34■■■■□ 3.25
CDKN3-207ENST00000543789 PTPN23Q9H3S7 1636 aa35.34■■■■□ 3.25
CDKN3-207ENST00000543789 FGD6Q6ZV73 1430 aa35.32■■■■□ 3.25
CDKN3-207ENST00000543789 STAG3Q9UJ98 1225 aa35.32■■■■□ 3.24
CDKN3-207ENST00000543789 ARHGAP23Q9P227 1491 aa35.31■■■■□ 3.24
CDKN3-207ENST00000543789 ANKRD30AQ9BXX3 1397 aa35.3■■■■□ 3.24
CDKN3-207ENST00000543789 UBR1Q8IWV7 1749 aa35.3■■■■□ 3.24
CDKN3-207ENST00000543789 ALKQ9UM73 1620 aa35.29■■■■□ 3.24
CDKN3-207ENST00000543789 SLIT1O75093 1534 aa35.29■■■■□ 3.24
CDKN3-207ENST00000543789 CFAP65Q6ZU64 1925 aaKnown RBP35.27■■■■□ 3.24
CDKN3-207ENST00000543789 TMEM2Q9UHN6 1383 aa35.25■■■■□ 3.23
CDKN3-207ENST00000543789 IDI1Q13907 227 aa35.25■■■■□ 3.23
CDKN3-207ENST00000543789 SENP3Q9H4L4 574 aaPredicted RBP35.24■■■■□ 3.23
CDKN3-207ENST00000543789 MED1Q15648 1581 aaPredicted RBP35.24■■■■□ 3.23
CDKN3-207ENST00000543789 STRCP1A6NGW2 1772 aa35.23■■■■□ 3.23
CDKN3-207ENST00000543789 CROCC2H7BZ55 1655 aa35.23■■■■□ 3.23
CDKN3-207ENST00000543789 SYNMO15061 1565 aa35.19■■■■□ 3.22
CDKN3-207ENST00000543789 PHF23Q9BUL5 403 aaPredicted RBP35.18■■■■□ 3.22
CDKN3-207ENST00000543789 LMTK2Q8IWU2 1503 aa35.17■■■■□ 3.22
CDKN3-207ENST00000543789 PIK3C2BO00750 1634 aa35.14■■■■□ 3.22
CDKN3-207ENST00000543789 FAM50AQ14320 339 aaKnown RBP35.13■■■■□ 3.21
CDKN3-207ENST00000543789 SLC52A1Q9NWF4 448 aa35.11■■■■□ 3.21
CDKN3-207ENST00000543789 EFCAB6Q5THR3 1501 aa35.11■■■■□ 3.21
CDKN3-207ENST00000543789 KCNA6P17658 529 aa35.1■■■■□ 3.21
CDKN3-207ENST00000543789 NOS1P29475 1434 aa35.09■■■■□ 3.21
CDKN3-207ENST00000543789 SLC26A8Q96RN1 970 aa35.08■■■■□ 3.21
CDKN3-207ENST00000543789 ADGRL2O95490 1459 aa35.06■■■■□ 3.2
CDKN3-207ENST00000543789 TMEM94Q12767 1356 aa35.03■■■■□ 3.2
CDKN3-207ENST00000543789 PROSER2Q86WR7 435 aaPredicted RBP35.03■■■■□ 3.2
CDKN3-207ENST00000543789 ANKRD50Q9ULJ7 1429 aa35.02■■■■□ 3.2
CDKN3-207ENST00000543789 BCANQ96GW7 911 aa35.01■■■■□ 3.2
CDKN3-207ENST00000543789 KDM5AP29375 1690 aaKnown RBP35.01■■■■□ 3.19
CDKN3-207ENST00000543789 FAM135BQ49AJ0 1406 aa34.99■■■■□ 3.19
CDKN3-207ENST00000543789 TET3O43151 1660 aa34.97■■■■□ 3.19
CDKN3-207ENST00000543789 RBM33Q96EV2 1170 aaKnown RBP34.96■■■■□ 3.19
CDKN3-207ENST00000543789 RPRD2Q5VT52 1461 aaKnown RBP34.95■■■■□ 3.19
CDKN3-207ENST00000543789 HDGFP51858 240 aaKnown RBP34.94■■■■□ 3.18
CDKN3-207ENST00000543789 ADGRB3O60242 1522 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms