RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 FKBP8Q14318 412 aa22.22■■□□□ 1.15
SCNN1A-221ENST00000543768 CARD11Q9BXL7 1154 aa22.21■■□□□ 1.15
SCNN1A-221ENST00000543768 CCDC144AA2RUR9 1427 aa22.21■■□□□ 1.15
SCNN1A-221ENST00000543768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.21■■□□□ 1.15
SCNN1A-221ENST00000543768 MAGI2Q86UL8 1455 aa22.2■■□□□ 1.15
SCNN1A-221ENST00000543768 DHX29Q7Z478 1369 aaKnown RBP22.2■■□□□ 1.14
SCNN1A-221ENST00000543768 ERBINQ96RT1 1412 aa22.2■■□□□ 1.14
SCNN1A-221ENST00000543768 TRAPPC8Q9Y2L5 1435 aa22.2■■□□□ 1.14
SCNN1A-221ENST00000543768 ARAP3Q8WWN8 1544 aa22.17■■□□□ 1.14
SCNN1A-221ENST00000543768 MRS2Q9HD23 443 aa22.16■■□□□ 1.14
SCNN1A-221ENST00000543768 TRPM1Q7Z4N2 1603 aa22.15■■□□□ 1.14
SCNN1A-221ENST00000543768 PRAG1Q86YV5 1406 aa22.15■■□□□ 1.14
SCNN1A-221ENST00000543768 ATP10AO60312 1499 aa22.14■■□□□ 1.13
SCNN1A-221ENST00000543768 ST20-MTHFSA0A0A6YYL1 179 aa22.13■■□□□ 1.13
SCNN1A-221ENST00000543768 NEFLP07196 543 aa22.13■■□□□ 1.13
SCNN1A-221ENST00000543768 POLR3GLQ9BT43 218 aa22.13■■□□□ 1.13
SCNN1A-221ENST00000543768 BCANQ96GW7 911 aa22.12■■□□□ 1.13
SCNN1A-221ENST00000543768 ROCK2O75116 1388 aaKnown RBP22.12■■□□□ 1.13
SCNN1A-221ENST00000543768 A2MP01023 1474 aa22.12■■□□□ 1.13
SCNN1A-221ENST00000543768 WDR7Q9Y4E6 1490 aa22.12■■□□□ 1.13
SCNN1A-221ENST00000543768 FAM9BQ8IZU0 186 aa22.11■■□□□ 1.13
SCNN1A-221ENST00000543768 RGL3Q3MIN7 710 aa22.11■■□□□ 1.13
SCNN1A-221ENST00000543768 RTEL1-TNFRSF6BF6WH68 1400 aa22.1■■□□□ 1.13
SCNN1A-221ENST00000543768 AFAP1Q8N556 730 aa22.09■■□□□ 1.13
SCNN1A-221ENST00000543768 SPAG9O60271 1321 aaKnown RBP22.08■■□□□ 1.13
SCNN1A-221ENST00000543768 ZFYVE16Q7Z3T8 1539 aa22.08■■□□□ 1.13
SCNN1A-221ENST00000543768 ABCA9Q8IUA7 1624 aa22.07■■□□□ 1.12
SCNN1A-221ENST00000543768 GPRASP1Q5JY77 1395 aa22.06■■□□□ 1.12
SCNN1A-221ENST00000543768 NBPF1Q3BBV0 1214 aa22.05■■□□□ 1.12
SCNN1A-221ENST00000543768 LAMC1P11047 1609 aa22.03■■□□□ 1.12
SCNN1A-221ENST00000543768 E9PCH4 1651 aa22.03■■□□□ 1.12
SCNN1A-221ENST00000543768 FANCAO15360 1455 aa22.03■■□□□ 1.12
SCNN1A-221ENST00000543768 ZBED9Q6R2W3 1325 aa22.02■■□□□ 1.12
SCNN1A-221ENST00000543768 DEPDC5O75140 1603 aa22.01■■□□□ 1.11
SCNN1A-221ENST00000543768 PRDM15P57071 1507 aaPredicted RBP22■■□□□ 1.11
SCNN1A-221ENST00000543768 INO80Q9ULG1 1556 aaPredicted RBP22■■□□□ 1.11
SCNN1A-221ENST00000543768 EIF2AK4Q9P2K8 1649 aaKnown RBP22■■□□□ 1.11
SCNN1A-221ENST00000543768 CNGB1Q14028 1251 aaPredicted RBP21.99■■□□□ 1.11
SCNN1A-221ENST00000543768 ATP7AQ04656 1500 aa21.99■■□□□ 1.11
SCNN1A-221ENST00000543768 TSHZ2Q9NRE2 1034 aa21.98■■□□□ 1.11
SCNN1A-221ENST00000543768 ASXL2Q76L83 1435 aa21.98■■□□□ 1.11
SCNN1A-221ENST00000543768 ADGRL1O94910 1474 aa21.95■■□□□ 1.1
SCNN1A-221ENST00000543768 TRPM2O94759 1503 aa21.95■■□□□ 1.1
SCNN1A-221ENST00000543768 SCAPERQ9BY12 1400 aa21.94■■□□□ 1.1
SCNN1A-221ENST00000543768 SPHKAPQ2M3C7 1700 aa21.94■■□□□ 1.1
SCNN1A-221ENST00000543768 PTPRTO14522 1441 aa21.94■■□□□ 1.1
SCNN1A-221ENST00000543768 ANP32EQ9BTT0 268 aa21.94■■□□□ 1.1
SCNN1A-221ENST00000543768 TET3O43151 1660 aa21.93■■□□□ 1.1
SCNN1A-221ENST00000543768 VWDEQ8N2E2 1590 aa21.93■■□□□ 1.1
SCNN1A-221ENST00000543768 RNF17Q9BXT8 1623 aaKnown RBP21.93■■□□□ 1.1
SCNN1A-221ENST00000543768 TESK2Q96S53 571 aa21.92■■□□□ 1.1
SCNN1A-221ENST00000543768 CEP152O94986 1710 aa21.92■■□□□ 1.1
SCNN1A-221ENST00000543768 COL17A1Q9UMD9 1497 aaPredicted RBP21.92■■□□□ 1.1
SCNN1A-221ENST00000543768 KTN1Q86UP2 1357 aaKnown RBP21.91■■□□□ 1.1
SCNN1A-221ENST00000543768 PNISRQ8TF01 805 aaKnown RBP21.91■■□□□ 1.1
SCNN1A-221ENST00000543768 CLTCL1P53675 1640 aa21.89■■□□□ 1.1
SCNN1A-221ENST00000543768 RALBP1Q15311 655 aa21.89■■□□□ 1.09
SCNN1A-221ENST00000543768 MADDQ8WXG6 1647 aa21.89■■□□□ 1.09
SCNN1A-221ENST00000543768 DISP3Q9P2K9 1392 aa21.88■■□□□ 1.09
SCNN1A-221ENST00000543768 OSCARQ8IYS5 282 aa21.88■■□□□ 1.09
SCNN1A-221ENST00000543768 TMC1Q8TDI8 760 aa21.88■■□□□ 1.09
SCNN1A-221ENST00000543768 MYBBP1AQ9BQG0 1328 aaKnown RBP21.87■■□□□ 1.09
SCNN1A-221ENST00000543768 KIF3BO15066 747 aa21.87■■□□□ 1.09
SCNN1A-221ENST00000543768 IRX6P78412 446 aaPredicted RBP21.87■■□□□ 1.09
SCNN1A-221ENST00000543768 MROH1Q8NDA8 1641 aa21.87■■□□□ 1.09
SCNN1A-221ENST00000543768 KANK1Q14678 1352 aa21.87■■□□□ 1.09
SCNN1A-221ENST00000543768 PER1O15534 1290 aaPredicted RBP21.87■■□□□ 1.09
SCNN1A-221ENST00000543768 KIDINS220Q9ULH0 1771 aa21.86■■□□□ 1.09
SCNN1A-221ENST00000543768 BRD4O60885 1362 aaPredicted RBP21.86■■□□□ 1.09
SCNN1A-221ENST00000543768 MYT1LQ9UL68 1186 aa21.84■■□□□ 1.09
SCNN1A-221ENST00000543768 LRPPRCP42704 1394 aaKnown RBP21.83■■□□□ 1.09
SCNN1A-221ENST00000543768 PARD3Q8TEW0 1356 aa21.83■■□□□ 1.08
SCNN1A-221ENST00000543768 ERICH6BQ5W0A0 696 aa21.83■■□□□ 1.08
SCNN1A-221ENST00000543768 STAC3Q96MF2 364 aa21.82■■□□□ 1.08
SCNN1A-221ENST00000543768 IQGAP1P46940 1657 aa21.82■■□□□ 1.08
SCNN1A-221ENST00000543768 SMG6Q86US8 1419 aaKnown RBP21.81■■□□□ 1.08
SCNN1A-221ENST00000543768 NPM1P06748 294 aaKnown RBP eCLIP21.81■■□□□ 1.08
SCNN1A-221ENST00000543768 TMF1P82094 1093 aa21.81■■□□□ 1.08
SCNN1A-221ENST00000543768 ZNF518AQ6AHZ1 1483 aa21.8■■□□□ 1.08
SCNN1A-221ENST00000543768 NEURL4Q96JN8 1562 aa21.79■■□□□ 1.08
SCNN1A-221ENST00000543768 WASHC2CQ9Y4E1 1318 aa21.77■■□□□ 1.08
SCNN1A-221ENST00000543768 EFCAB6Q5THR3 1501 aa21.76■■□□□ 1.07
SCNN1A-221ENST00000543768 CD109Q6YHK3 1445 aa21.76■■□□□ 1.07
SCNN1A-221ENST00000543768 NLRP13Q86W25 1043 aa21.76■■□□□ 1.07
SCNN1A-221ENST00000543768 BCL11AQ9H165 835 aa21.76■■□□□ 1.07
SCNN1A-221ENST00000543768 PANK3Q9H999 370 aa21.76■■□□□ 1.07
SCNN1A-221ENST00000543768 NUDCQ9Y266 331 aa21.75■■□□□ 1.07
SCNN1A-221ENST00000543768 CFAP74Q9C0B2 1584 aa21.74■■□□□ 1.07
SCNN1A-221ENST00000543768 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
SCNN1A-221ENST00000543768 SCAF11Q99590 1463 aaKnown RBP21.74■■□□□ 1.07
SCNN1A-221ENST00000543768 KIAA1210Q9ULL0 1709 aa21.73■■□□□ 1.07
SCNN1A-221ENST00000543768 PPRC1Q5VV67 1664 aaKnown RBP21.73■■□□□ 1.07
SCNN1A-221ENST00000543768 LMTK2Q8IWU2 1503 aa21.73■■□□□ 1.07
SCNN1A-221ENST00000543768 PPP4R2Q9NY27 417 aa21.73■■□□□ 1.07
SCNN1A-221ENST00000543768 POGZQ7Z3K3 1410 aa21.72■■□□□ 1.07
SCNN1A-221ENST00000543768 KIF1BO60333 1816 aa21.72■■□□□ 1.07
SCNN1A-221ENST00000543768 SENP3-EIF4A1A0A087X0R7 540 aa21.7■■□□□ 1.07
SCNN1A-221ENST00000543768 MLH3Q9UHC1 1453 aa21.7■■□□□ 1.06
SCNN1A-221ENST00000543768 CC2D1BQ5T0F9 858 aaKnown RBP21.69■■□□□ 1.06
SCNN1A-221ENST00000543768 MAP3K4Q9Y6R4 1608 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms